FC876413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_PIG (Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 4.311e-24 Identity = 67/169 (39.64%), Postives = 90/169 (53.25%), Query Frame = 1 Query: 142 NKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 N AFKALI A+Y+G V ++ +F G TN TPEFL+ P GKVP E DG +FESNAIA YV+ + L GS+ +A + QW+ F+ +I W P +G Y QA E + HL + T+LVG VTLADI + C L + ++L Sbjct: 7 NWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVL 171
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_RABIT (Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 5.630e-24 Identity = 68/178 (38.20%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 115 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 A L+ N AFKALI A+Y+G V ++ +F G TN+TPEFL+ P GKVP E DG +FESNAIA YV+ + L GS+ +A + QW+ F+ +I W P +G + QA E + HL + T+LVG VTLADI + C L + ++L Sbjct: 3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVL 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_MACFA (Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.630e-24 Identity = 68/178 (38.20%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 115 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 A L+ N AFKALI A+Y+G V ++ +F G TN+TPEFL+ P GKVP E DG +FESNAIA YV+ + L GS+ +A + QW+ F+ +I W P +G + QA E + HL + T+LVG VTLADI + C L + ++L Sbjct: 3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVL 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_HORSE (Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.630e-24 Identity = 68/178 (38.20%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 115 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 A L+ N AFKALI A+Y+G V ++ +F G TN+TPEFL+ P GKVP E DG +FESNAIA YV+ + L GS+ +A + QW+ F+ +I W P +G + QA E + HL + T+LVG VTLADI + C L + ++L Sbjct: 3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVL 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_BOVIN (Elongation factor 1-gamma OS=Bos taurus GN=EEF1G PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.630e-24 Identity = 68/178 (38.20%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 115 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 A L+ N AFKALI A+Y+G V ++ +F G TN+TPEFL+ P GKVP E DG +FESNAIA YV+ + L GS+ +A + QW+ F+ +I W P +G + QA E + HL + T+LVG VTLADI + C L + ++L Sbjct: 3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVL 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_HUMAN (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 2.794e-23 Identity = 67/178 (37.64%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 115 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 A L+ N AFKALI A+Y+G V ++ +F G TN+TPEFL+ P GKVP E DG +FESNAIA YV+ + L GS+ +A + QW+ F+ +I W P +G + QA E + +L + T+LVG VTLADI + C L + ++L Sbjct: 3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVL 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1GB_XENLA (Elongation factor 1-gamma-B OS=Xenopus laevis GN=eef1g-B PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.365e-22 Identity = 63/170 (37.06%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 142 NKNAFKALITAEYTGVNVELVKN---FEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSS-LIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 N A+K LI A+Y+ +++ + F+ G+TNKTPEFLK P+GKVP E +G +FES+AIA YVA ++ L GS+ + A + QW+ FS + W P +G + QA E + HL + T+LVG +TLADI +TC+L + ++L Sbjct: 12 NWRAYKPLIAAQYSRFPIKVASSPPEFQFGLTNKTPEFLKKFPLGKVPAFEGNNGFCLFESSAIAHYVA----NDELRGSNNRLHQAQVIQWVGFSDSHVVPPASAWVFPTLGIMQFNKQATEQAKEEIKTVLGVLDCHLQTRTFLVGERITLADITLTCSLLWLYKQVL 177
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_CARAU (Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.416e-21 Identity = 63/178 (35.39%), Postives = 93/178 (52.25%), Query Frame = 1 Query: 115 AMVLHAGNTNKNAFKALITAEYTGVNVELVKN---FEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 A L+ N AFKA I A+Y+G +++ F G TN++P FL P+GKVP + DG +FESNAIA +++ ++ L GS+ SA + QW+ F+ EI W P +G + QA E N HL + T+LVG V+LADI + C+L + ++L Sbjct: 3 AGTLYTYPENWRAFKAQIAAQYSGARLKIASASPAFTFGQTNRSPAFLSNFPLGKVPAYQGDDGFCLFESNAIAHFLS----NDALRGSTPQASAQVLQWVSFADSEIIPPASAWVFPTLGIMQFNKQATEQAKEEVKRVLAVLNQHLNTRTFLVGERVSLADITVVCSLLWLYKQVL 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_DANRE (Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.461e-21 Identity = 62/178 (34.83%), Postives = 93/178 (52.25%), Query Frame = 1 Query: 115 AMVLHAGNTNKNAFKALITAEYTGVNVELVKN---FEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRIL 636 A L+ N AFKA I A+Y+G +++ F G TN++P FL P+GKVP + DG +FESNAIA Y++ ++ L GS+ SA + QW+ F+ E+ W P +G + QA E N HL + T+LVG ++LADI + C+L + ++L Sbjct: 3 AGTLYTYPENWRAFKAQIAAQYSGARLKIASAPPAFTFGQTNRSPAFLGNFPLGKVPAYQGDDGFCLFESNAIAHYLS----NDVLRGSTPQASAQVLQWVSFADSEVIPPASAWVFPTLGIMQFNKQATEQAKEEVKRVLAVLNQHLNTRTFLVGERISLADITVVCSLLWLYKQVL 176
BLAST of FC876413 vs. ExPASy Swiss-Prot
Match: EF1G_DROME (Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 6.029e-18 Identity = 60/159 (37.74%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 142 NKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGP-IFESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAE-EXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNL 612 N A+KALI A+Y+G V++ NF+ G TNK+ EFLK P GKVP ET +G + ESNAIA +A + G A ++QWI F+ EI W P +G LPQ + N L T+L G +TLADI++ +L Sbjct: 12 NFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQYLSESNAIAYLLANEQLRG---GKCPFVQAQVQQWISFADNEIVPASCAWVFPLLGI---LPQQKNSTAKQEAEAVLQQLNQKLQDATFLAGERITLADIVVFSSL 164 The following BLAST results are available for this feature:
BLAST of FC876413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876413 ID=FC876413; Name=FC876413; organism=Citrus clementina; type=EST; length=639bpback to top |