FC876416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC4_ORYSJ (Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.101e-24 Identity = 56/151 (37.09%), Postives = 88/151 (58.28%), Query Frame = 3 Query: 141 TRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSVHE 587 TRHY++ V+ + C ++ +NGQ PGP + AR GD + + +TN + + +HWHG+RQ+ T WADG A I+QCPI G++Y+Y F V + GT ++H H+ R A +YG+L++ G PF E ++ +WW+ E Sbjct: 30 TRHYEFNVQMANATRLCNTKSMVTVNGQCPGPELVAREGDRVVIRVTNNV-AHNISLHWHGVRQVRTGWADGPAYITQCPIQTGQSYVYNFTVAGQRGTLWWHAHISWLR-ATVYGALVILPKLGVPYPFPAPHKEVPVIFGEWWNADTEE 178
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC21_ORYSJ (Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC21 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.438e-24 Identity = 59/171 (34.50%), Postives = 92/171 (53.80%), Query Frame = 3 Query: 81 VVTCWILMLCSVFETSYGSKTR-HYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYR-FKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVH 584 ++ C +L ++G +TR HY + + + C E V+ +NGQFPGPTI AR GD + V + N + + IHWHG+ Q PW+DG I+QCPI P + Y+ ++ GT ++H H R A + G+++V G+ PF D E ++L +WW V+ Sbjct: 12 LLACAVLTFAVAISPAHGGRTRRHYDFFITETNYRRLCHEKSVLTVNGQFPGPTIYARKGDLVIVNVYNH-GNKNITIHWHGVDQPRNPWSDGPEFITQCPIRPDGKFTYQVIMSEEEGTLWWHAHSDFDR-ATVLGAIVVHPKHGDTFPFKRPDKEIPIILGEWWKNDVN 180
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC7_ARATH (Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.878e-24 Identity = 60/172 (34.88%), Postives = 92/172 (53.49%), Query Frame = 3 Query: 72 VAVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSV 581 V V + C +++L TS + + + V+ + S CK ++ +NG PGPTIR + GD++ + + N + IHWHGI T WADG + I+QCPI PG+ Y YRF + + GT ++H H R A +YG+L++ G PF E +L +WW+ V Sbjct: 4 VRVPIACALILLAISSITS--ASIVEHTFNVQNLTVSRLCKRQVITVVNGSLPGPTIRVKEGDSLVIHVLNHS-PHNITIHWHGIFHKLTVWADGPSMITQCPIQPGQRYAYRFNITGQEGTLWWHAHASFLR-ATVYGALVIRPKSGHSYPFPKPHKEVPILFGEWWNTDV 171
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC17_ARATH (Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.452e-24 Identity = 61/174 (35.06%), Postives = 98/174 (56.32%), Query Frame = 3 Query: 57 LGLRHVAVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFK-VDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWH 572 + L+ + V +C +L+ F TRHY E++ + C ++ +NGQFPGP + AR GD + +++ N++ + +HWHGIRQL + WADG A I+QCPI G++Y+Y + V + GT +YH H+ RS +YG LI+ G PF E ++ +W++ Sbjct: 1 MALQLLLAVFSCVLLLPQPAFGI-----TRHYTLEIKMQNVTRLCHTKSLVSVNGQFPGPKLIAREGDQVLIKVVNQV-PNNISLHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYTIVGQRGTLWYHAHISWLRST-VYGPLIILPKRGVPYPFAKPHKEVPMIFGEWFN 167
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: PCOA_ECOLX (Copper resistance protein A OS=Escherichia coli GN=pcoA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.135e-24 Identity = 56/124 (45.16%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 213 INGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVH 584 ING PGP +R + GDTI +++ N+L E IHWHGI DG +S I P +TY+Y FKV + GTY+YH H G+Q G+YG++I+D E EPF YD E ++LSDW + H Sbjct: 68 INGGLPGPVLRWKEGDTITLKVKNRL-NEQTSIHWHGIILPAN--MDGVPGLSFMGIEPDDTYVYTFKVKQNGTYWYHSHSGLQEQEGVYGAIIIDAR--EPEPFAYDREHVVMLSDWTDENPH 186
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC10_ORYSJ (Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.318e-24 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 132 GSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD-KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF---HYDGEFNLLLSDWWH 572 G+ TR+Y + V+ + C + +NG+FPGP I R GD + V++ N + + + IHWHG+RQ+ T W+DG A ++QCPI G++Y+Y F ++ + GT F+H H+ RS LYG +I+ G PF H D ++ +W++ Sbjct: 28 GAATRYYTFNVKLQNVTRLCNTRAIPTVNGKFPGPKIVTREGDRVVVKVVNNI-KDNITIHWHGVRQMRTGWSDGPAYVTQCPIQTGQSYVYNFTINGQRGTLFWHAHVSWLRST-LYGPIIILPKAGLPLPFTEPHKD--VPIIFGEWFN 174
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSI (Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.217e-23 Identity = 55/145 (37.93%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 189 CKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHEAEVGLSSGHY 617 C + + +NGQ PGPT+ GDT+ V + NK+ G+ IHWHG+RQL + WADG I++CPI PG YRF V D+ GT ++H H+ RS + G+ I+ DG K PF + +++ +WW + E + + G++ Sbjct: 41 CNTTKIFVVNGQLPGPTVDVTEGDTVVVHVVNKI-PHGLTIHWHGVRQLRSCWADGAGFITECPIPPGSERTYRFNVTDQVGTLWWHAHVTCLRST-INGAFIIRPRDG-KYPFPTPVKDVPIIIGEWWELDLVELDRRMRDGNF 182
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC6_ORYSJ (Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.589e-23 Identity = 55/126 (43.65%), Postives = 76/126 (60.32%), Query Frame = 3 Query: 204 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDV--ADGEKEPFHYDGEFNLLLSDWWH 572 V +NG+ PGP + AR GDT+ + + N V +HWHG+ Q GTPWADG A ++QCPI PG Y YRF V + GT ++H H R A +YG+L++ A G P Y+ E +LL +WW+ Sbjct: 47 VTAVNGRVPGPQVEAREGDTVVIHVINDS-PYNVTVHWHGVFQRGTPWADGPAMVTQCPIRPGHRYTYRFAVAGQEGTLWWHAHSSYMR-ATVYGALVIRPRRAGGYPFPTPYE-EKTVLLGEWWN 169
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC2_ARATH (Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.589e-23 Identity = 53/140 (37.86%), Postives = 87/140 (62.14%), Query Frame = 3 Query: 99 LMLCSVFETSYGSK------TRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV 497 L++ +F SY TRHY+++++ + CK ++ +NG+FPGP + AR GD + +++ N + + + IHWHGIRQL + WADG + ++QCPI G++Y+Y F V + GT ++H H+ R A +YG LI+ Sbjct: 9 LLVAFLFAISYNIDAASAGITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHV-SNNISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTGQRGTLWWHAHIQWMR-ATVYGPLII 146
BLAST of FC876416 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSJ (Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC20 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.589e-23 Identity = 54/145 (37.24%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 189 CKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHEAEVGLSSGHY 617 C + + +NGQ PGPT+ GDT+ + + NK+ G+ IHWHG+RQL + WADG I++CPI PG YRF V D+ GT ++H H+ RS + G+ I+ DG K PF + +++ +WW + E + + G++ Sbjct: 41 CNTTKIFVVNGQLPGPTVDVTEGDTVVIHVVNKI-PHGLTIHWHGVRQLRSCWADGAGFITECPIPPGSERTYRFNVTDQVGTLWWHAHVTCLRST-INGAFIIRPRDG-KYPFPTPVKDVPIIIGEWWELDLVELDRRMRDGNF 182 The following BLAST results are available for this feature:
BLAST of FC876416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876416 ID=FC876416; Name=FC876416; organism=Citrus clementina; type=EST; length=632bpback to top |