FC876418

Overview
NameFC876418
Unique NameFC876418
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig952 contig Ccv1_Contig952:10..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876418 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 75/148 (50.68%), Postives = 102/148 (68.92%), Query Frame = 2
Query:  281 FKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 721
            F VESP+V Y    I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  +SW T+   ++ANY+GSLTQA  + +G    G+E++ PF ++LPMV P+D+VF GWDIS +NLA+A
Sbjct:    7 FFVESPDVVYGPEAIEAQYEYRTTRVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLSWPTRSGRKEANYYGSLTQAGTVSLGLDAEGQEVFVPFSAVLPMVAPNDLVFDGWDISSLNLAEA 150          
BLAST of FC876418 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.074e-36
Identity = 75/148 (50.68%), Postives = 102/148 (68.92%), Query Frame = 2
Query:  281 FKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 721
            F VESP+V Y    I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  +SW T+   ++ANY+GSLTQA  + +G    G+E++ PF ++LPMV P+D+VF GWDIS +NLA+A
Sbjct:    7 FFVESPDVVYGPEAIEAQYEYRTTRVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLSWPTRSGRKEANYYGSLTQAGTVSLGLDAEGQEVFVPFSALLPMVAPNDLVFDGWDISSLNLAEA 150          
BLAST of FC876418 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.496e-34
Identity = 73/147 (49.66%), Postives = 98/147 (66.67%), Query Frame = 2
Query:  284 KVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGS-YNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 721
            +V SP V+  D  I + YDY+T+   H  R    Q  V P+T   + +T  HVPKLGVMLVGWGGNNGSTLT  + ANR  + W  +  VQ+AN++GS+TQAS + +GS  +G ++Y P K +LPMV PD+I+  GWDIS ++L DA
Sbjct:   10 EVISPKVQVDDEFITTDYDYQTS---HVKRTADGQLQVHPQTTSLKIRTGRHVPKLGVMLVGWGGNNGSTLTAALEANRRQLKWRKRTGVQEANWYGSITQASTVFIGSDEDGGDVYVPMKELLPMVEPDNIIVDGWDISGLHLGDA 153          
BLAST of FC876418 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.333e-34
Identity = 71/146 (48.63%), Postives = 101/146 (69.18%), Query Frame = 2
Query:  287 VESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 721
            V+SP+V +    I + Y+Y TT +  E   G  +  V+P   ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  ++W T+   ++ANY+GSLTQA  + +G   +G E++ PF ++LPMV P+D+VF GWDIS +NLA+A
Sbjct:    9 VDSPDVIFGPEAIEARYEYRTTRVSREG--GVLR--VRPTATRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLTWPTRTGRKEANYYGSLTQAGTVNLGLDGDGREVFVPFSALLPMVAPNDLVFDGWDISSLNLAEA 150          
BLAST of FC876418 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.504e-31
Identity = 67/146 (45.89%), Postives = 99/146 (67.81%), Query Frame = 2
Query:  290 ESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG--SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 721
            +S N    D+ +++ + YE + +V ++ NG +  IV P    YEFK D+ VPK+G++LVG GGNNG+TL G  +AN+  IS+  K+ V + NY+GS+TQAS +++G     GE++Y PF SI+PMVNP+D+V  GWDIS + L  A
Sbjct:    8 KSSNSVTKDDHLYTKFTYENS-VVEKDANGKF--IVTPTASDYEFKVDLKVPKVGLLLVGIGGNNGTTLLGATLANKHNISFENKEGVVKPNYYGSVTQASTVKIGVDKETGEDVYVPFNSIVPMVNPNDLVVDGWDISGLPLDQA 150          
BLAST of FC876418 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 3.813e-30
Identity = 68/152 (44.74%), Postives = 98/152 (64.47%), Query Frame = 2
Query:  272 IENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVP-KLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 721
            I + KV +    Y DNE+ + Y YE   +V +  +G +   V P    Y FK D+  P KLG+ML+G GGNNGSTL   V+AN+  + + TK+ V+Q NYFGS+TQ S +++G    G ++YAPF S+LPMV+P+D V  GWDI++ +L +A
Sbjct:    9 ITSVKVVTDKCTYKDNELLTKYSYENA-VVTKTASGRFD--VTPTVQDYVFKLDLKKPEKLGIMLIGLGGNNGSTLVASVLANKHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDFVVSGWDINNADLYEA 157          
BLAST of FC876418 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27
Identity = 65/144 (45.14%), Postives = 95/144 (65.97%), Query Frame = 2
Query:  302 VKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVP-KLGVMLVGWGGNNGSTLTGGVIANREGISWATKDT--VQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADA 721
            V Y +NE+ + Y Y T  +VH N + T Q+ V P    Y+FK D++ P +LGVMLVG GGNNGST+   V+AN+  + + T+D   + + NY+GSLTQ+S I++G    G+++Y PF S++PMVNP+D V  GWDI+   +  A
Sbjct:   18 VSYKENELLTNYTYHTN-VVHTNSDKT-QFEVTPLDKNYQFKVDLNKPERLGVMLVGLGGNNGSTMMAAVLANKHNVCFRTRDKEGLTEPNYYGSLTQSSTIKLGVDSKGKDVYVPFNSLVPMVNPNDFVVSGWDINGATMDQA 159          
The following BLAST results are available for this feature:
BLAST of FC876418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HUMAN4.650e-3650.68Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_MACFA6.074e-3650.68Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]
INO1_DROME1.496e-3449.66Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_RAT3.333e-3448.63Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_CANAL4.504e-3145.89Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_YEAST3.813e-3044.74Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]
INO1_CANGA1.038e-2745.14Inositol-3-phosphate synthase OS=Candida glabrata ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32004E09EF DevOvary1 Citrus clementina cDNA clone C32004E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876418 ID=FC876418; Name=FC876418; organism=Citrus clementina; type=EST; length=721bp
GACAGATTACCAAGCTAGTTTCGAAAGTTAAAATAGTGTTGAGTCGAGTG
GGAAGTGAGAATTGAGAAGGAGAGTCGAGTTCGGAGACAGCAAGACGAAA
CAGCTCTTCTTCCAATAAATCTCAAAGCATTTGTTTGGTTTTATTTAAAG
CAATTTTCTCAGCAAACTCTTCTTCTAATAAATTTTAAAGCATTTGTTTG
GTTTTTATTTAAAGCAATTTTCTCAGCGAAGTTTTCAATTTTTTCTCTAA
AATTTTCCTGGGAAAATGTTTATCGAAAATTTCAAGGTTGAGAGCCCAAA
TGTGAAGTACACAGATAATGAGATTCACTCTGTGTACGATTATGAAACCA
CTGAGCTTGTTCATGAGAACAGAAATGGCACTTATCAGTGGATTGTCAAG
CCCAAAACTGTCAAATATGAGTTCAAAACCGATGTTCATGTCCCTAAACT
TGGGGTTATGCTTGTGGGTTGGGGTGGAAACAACGGCTCAACTCTCACGG
GTGGTGTTATCGCGAATCGAGAGGGAATCTCCTGGGCCACAAAGGACACA
GTGCAACAAGCCAATTATTTTGGTTCACTTACCCAAGCATCAGCAATTAG
AGTTGGGTCTTACAATGGAGAGGAGATTTATGCTCCATTCAAGAGCATTC
TCCCTATGGTGAACCCAGATGACATTGTGTTTGGAGGATGGGACATTAGT
GACATGAACTTGGCTGATGCC
back to top