FC876420
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 3.680e-95 Identity = 157/215 (73.02%), Postives = 175/215 (81.40%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDETWK 647 + NRQLS MHPIYRLL PHFRYTMEIN ARQ+LVN GIIE+ F PGKY++E SS Y K WRFD E LP DLI RGLA ED +A HG++LTI DYPFANDGL LWDAIK+WVTDYV HYYPD+ L+ SDEELQ WW+E+R +GHGDKK EPWWPVLKT DLI ++TTI WVTSGHHAAVNFGQY YGGYFPNRPTT R + TEDP+DE K Sbjct: 568 AANRQLSAMHPIYRLLHPHFRYTMEINARARQSLVNGGGIIETCFWPGKYALELSSAVYGKLWRFDQEGLPADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIKEWVTDYVKHYYPDEELITSDEELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEALK 782
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 310.842 bits (795), Expect = 3.817e-84 Identity = 145/211 (68.72%), Postives = 164/211 (77.73%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSD 635 + NRQLS MHPIY+LL PHFRYTM IN AR AL++A GIIE SFSP KYSME SSVAYDK WRFD EALP DL+ RG+A EDP+A HGLKL IEDYPFANDGL +WDAIK WV YV +YPD V DEELQA+WTE+RT GHGDKK PWWP L +P+ L +TTIVWV + HHAAVNFGQY +GGYFPNRP+ AR + E+P D Sbjct: 595 AANRQLSEMHPIYQLLRPHFRYTMRINARARSALISAGGIIERSFSPQKYSMELSSVAYDKLWRFDTEALPADLVRRGMAEEDPTAEHGLKLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVD 805
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 8.504e-84 Identity = 144/211 (68.25%), Postives = 164/211 (77.73%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSD 635 + NRQLS MHPIY+LL PHFRYTM IN LAR L++A GIIE SFSP KYSME SSVAYDK WRFD EALP DL+ RG+A EDP+A HGL+L IEDYPFANDGL +WDAIK WV YV +YPD V DEELQA+WTE+RT GHGDKK PWWP L +P+ L +TTIVWV + HHAAVNFGQY +GGYFPNRP+ AR + E+P D Sbjct: 612 AANRQLSEMHPIYQLLHPHFRYTMRINALARSRLISAAGIIELSFSPQKYSMELSSVAYDKLWRFDMEALPADLVRRGMAEEDPTAEHGLRLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVD 822
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 4.367e-80 Identity = 139/216 (64.35%), Postives = 165/216 (76.39%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDETWKF 650 + NRQLS MHP+YRLL PHFR+TMEIN AR L+NA GIIE SF PG+YS+E SSVAYD+QWRFD EALP+DLI RG+AV +P+ L+L IEDYP+ANDGL +WDAIKQW YV HYYP + + DEELQAWWTE+RT GH DK+ EPWWP L + ++L + + TI+WVTSGHHAAVNFGQY GY PNRPT AR N+ TE D+ F Sbjct: 601 AANRQLSQMHPVYRLLHPHFRFTMEINAQARAMLINAGGIIEGSFVPGEYSLELSSVAYDQQWRFDMEALPEDLIRRGMAVRNPNGE--LELAIEDYPYANDGLLVWDAIKQWALTYVQHYYPCAADIVDDEELQAWWTEVRTKGHADKQDEPWWPELDSHENLAQTLATIMWVTSGHHAAVNFGQYPMAGYIPNRPTMARRNMPTEIGGDDMRDF 814
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 4.829e-79 Identity = 137/215 (63.72%), Postives = 165/215 (76.74%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDETWK 647 +TNRQLS MHP+YRLL PHFRYTMEIN LAR+AL+NADGIIE +F GKYS+E SSVAY W+F+ EALP+DLI+RGLAV L+L I+DYP+A+DGL +W +IKQW +DYV+ YY V DEEL+AWW E+RT GH DKK EPWWPV T ++L++I+T I+WVTSGHHAAVNFGQY Y GYFPNRPT R NI E+ D+ K Sbjct: 570 ATNRQLSRMHPVYRLLHPHFRYTMEINALAREALINADGIIEEAFLAGKYSIELSSVAYGAAWQFNTEALPEDLINRGLAVRRDDGE--LELAIKDYPYADDGLLIWGSIKQWASDYVDFYYKSDGDVAGDEELRAWWEEVRTKGHADKKDEPWWPVCDTKENLVQILTIIMWVTSGHHAAVNFGQYHYAGYFPNRPTVVRRNIPVEENRDDEMK 782
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 2.930e-76 Identity = 135/216 (62.50%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDETWKF 650 + NRQLS MHPIYRLL PHFR+TMEIN AR L+ ADGIIE +FSPG++SME SS AYDKQWRFD EALP+DLI RG+AV L+L IEDYP+ANDGL +WDAIKQW +DYV HYYP + DEELQ WWTE+RT GH DK+ EPWWP L + L++++ TI+WVTS HHAAVNFGQY GY PN P+ AR N+ E +E F Sbjct: 602 AANRQLSQMHPIYRLLHPHFRFTMEINAQARGMLICADGIIEKTFSPGEFSMEISSAAYDKQWRFDMEALPEDLIRRGMAVRGEDGK--LELAIEDYPYANDGLLVWDAIKQWASDYVAHYYPCAVDIVDDEELQDWWTEVRTKGHPDKQDEPWWPELDCHESLVQVLATIMWVTSAHHAAVNFGQYPMAGYVPNHPSIARRNMPCEMGPEEMLAF 815
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 3.581e-74 Identity = 131/207 (63.29%), Postives = 156/207 (75.36%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATE 623 +TNR LSV+HPIY+LL PH+R T+ INGLARQ+L+NADGIIE SF PGKYS+E SS Y K W F +ALP DL+ RGLA+EDPSAPHGL+L IEDYP+A DGL++WDAIK WV +YV+ YYP + V+ D ELQAWW E GHGD K +PWWP ++T +DLI+ + IVW S HAAVNFGQY YGG NRPT AR I E Sbjct: 539 ATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVY-KNWVFTDQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKMQTTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAE 744
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 1.777e-73 Identity = 123/213 (57.75%), Postives = 156/213 (73.24%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDET 641 + +RQLS MHPI++LLDPH RYT+EIN +ARQ L++ADG+IES F+ G+Y +E SS AY +WRFD E LP DLI RG+AV DP+ PHGLKL +EDYP+ANDGL LW AI+ WV YV YY + +L+++D ELQAW++E VGH D + WWP L T +DL+ +ITTI+W+ S HAA+NFGQY YGGY PNRP R I E + T Sbjct: 599 AAHRQLSAMHPIFKLLDPHMRYTLEINAVARQTLISADGVIESCFTAGQYGLEISSAAYKNKWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLVEDYPYANDGLLLWSAIQTWVRTYVERYYANSNLIQTDTELQAWYSESINVGHADHRDAEWWPKLSTVEDLVSVITTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEFT 811
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.321e-73 Identity = 125/211 (59.24%), Postives = 152/211 (72.04%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSD 635 +TNRQLS MHP+Y+LL PH RYT+EIN AR++L+N GIIES F+PGKY+ME SS AY WRFD E LP DL+ RG+A ED SA G++L I+DYP+A DGL +W AIK V YV H+Y D + SD ELQAWW EI+ GH DKK EPWWP L T +DL +I+T ++W+ SG HAA+NFGQY +GGY PNRPT R I E D Sbjct: 589 ATNRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTPGKYAMELSSAAYKSMWRFDMEGLPADLVRRGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIKDLVESYVKHFYSDSKSITSDLELQAWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTLLRKLIPQETDPD 799
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 3.959e-73 Identity = 122/201 (60.70%), Postives = 155/201 (77.11%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNRQLSV+HPI++LL PHFR TM IN LARQ L+NA G++ES+ P K++ME S+V Y K W F +ALP DL+ RG+AVED S+PHG++L I+DYP+A DGL++W AIK WVTDY + YY + D ELQAWW E+R VGHGDKK+EPWW ++TP++LI+ TTI+W+ S HAAVNFGQY Y GY PNRPT +R Sbjct: 535 ATNRQLSVLHPIHKLLYPHFRDTMNINALARQILINAGGVLESTVFPSKFAMEMSAVVY-KDWVFPDQALPADLVKRGVAVEDSSSPHGVRLLIDDYPYAVDGLEIWSAIKSWVTDYCSFYYGSNEEILKDNELQAWWKEVREVGHGDKKNEPWWAEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSR 734 The following BLAST results are available for this feature:
BLAST of FC876420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876420 ID=FC876420; Name=FC876420; organism=Citrus clementina; type=EST; length=650bpback to top |