FC876420
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.152e-72 Identity = 123/201 (61.19%), Postives = 154/201 (76.62%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNRQLSV+HPI++LL PHFR TM IN ARQ LVNA G++ES+ K++ME S+V Y K W F +ALP DL+ RG+AVED S+PHG++L IEDYP+A DGL++W AIK WVTDY + YY + D ELQAWW E+R VGHGDKK+EPWWP ++TP++LI+ TTI+W+ S HAAVNFGQY Y GY PNRPT +R Sbjct: 536 ATNRQLSVLHPIHKLLYPHFRDTMNINASARQLLVNAGGVLESTVFQSKFAMEMSAVVY-KDWVFPDQALPADLVKRGVAVEDSSSPHGVRLLIEDYPYAVDGLEIWSAIKSWVTDYCSFYYGSDEEILKDNELQAWWKELREVGHGDKKNEPWWPEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSR 735
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 5.717e-72 Identity = 122/210 (58.10%), Postives = 153/210 (72.86%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATE-DP 629 + +RQLS MHPI++LLDPH RYT+EIN LARQ+L++ADG+IE F+ G Y ME S+ AY WRFD E LP DLI RG+A+ D + PHGLKL IEDYP+ANDGL LW AI+ WV YV YYP+ +L+++D ELQ+W++E VGH D + WWP L T DL+ I+TT++W+ S HAA+NFGQY YGGY PNRP R I E DP Sbjct: 592 AAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLISADGVIEGGFTAGAYGMEMSAAAYKSSWRFDMEGLPADLIRRGMAIPDATQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERYYPNPNLIKTDSELQSWYSESINVGHADLRDADWWPELSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDP 801
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOXB_PHAVU (Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 9.752e-72 Identity = 119/201 (59.20%), Postives = 157/201 (78.11%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNRQLSV+HP+Y+LL PH+R TM IN LAR++LVNADGIIE +F G+Y++E S+V Y K W +ALP DL+ RG+AV+DPSAPHG+KL IEDYP+A+DGL++WDAIK WV +YV YY +++ D ELQAWW E+ VGHGD K +PWWP +++ ++L+E+ TT++W+ S HAAVNFGQY YGG NRPT +R Sbjct: 421 ATNRQLSVVHPVYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYALELSAVIY-KDWSLHDQALPNDLVKRGVAVKDPSAPHGVKLVIEDYPYASDGLEIWDAIKSWVVEYVAFYYKSDEVLQQDSELQAWWKELVQVGHGDLKDKPWWPKMQSRENLVEVSTTLIWIASALHAAVNFGQYPYGGLILNRPTISR 620
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2) HSP 1 Score: 269.24 bits (687), Expect = 1.274e-71 Identity = 119/201 (59.20%), Postives = 154/201 (76.62%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 ++NRQLSV+HPI++LL PHFR TM IN LAR L+N+DG++E + P +Y+ME SS Y K W F +ALPKDL+ RG+AVEDP++ +G+KL IEDYPFA DGL++W AIK WVT+Y YY + V++D E+Q+WWTE+RT GHGDK+HE WWP ++T DLIE T I+W+ S HAAVNFGQY Y G+ PNRPT +R Sbjct: 556 ASNRQLSVVHPIHKLLHPHFRDTMNINALARHVLINSDGVLERTVFPSRYAMEMSSSIY-KNWVFTEQALPKDLLKRGVAVEDPNSDNGVKLLIEDYPFAVDGLEIWSAIKTWVTEYCTFYYNNDKTVQTDTEIQSWWTELRTKGHGDKRHESWWPSMQTRDDLIETCTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSR 755
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 6.321e-71 Identity = 121/201 (60.20%), Postives = 150/201 (74.63%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNR LSV+HPIY+LL PH+R TM IN LARQ+L+NA G+IE SF PG++++E SS Y K W F +ALP DLI RG+AVEDPS+P+GL+L +EDYP+A DGL++WD I+ WV DYV+ YYP V+ D ELQAWW E GHGD K +PWWP L TP+DLI + I+W+ S HAAVNFGQY YGG+ NRPT R Sbjct: 536 ATNRHLSVLHPIYKLLLPHYRDTMNINALARQSLINAGGVIERSFLPGEFAVEMSSAVY-KSWVFTDQALPADLIKRGMAVEDPSSPYGLRLVVEDYPYAVDGLEIWDTIQTWVKDYVSLYYPTNDAVKKDTELQAWWKEAVEKGHGDLKDKPWWPKLNTPQDLIHTCSIIIWIASALHAAVNFGQYPYGGFILNRPTITR 735
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 266.929 bits (681), Expect = 6.321e-71 Identity = 121/201 (60.20%), Postives = 145/201 (72.14%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 + +R +S MHPI++LL PH RYT+EIN LARQ+L+NADG+IES F+PG S E S+ Y WRFD E LP DLI RG+AVED + PHG++L IEDYP+ANDGL LW AI+ WV YV YYPD V+ D ELQ W+ E VGHGD +H PWWP L TP DL I+TT+VW+ S HAA+NFGQY GGY PNRP R Sbjct: 587 AAHRHMSAMHPIFKLLHPHMRYTLEINALARQSLINADGVIESCFTPGPVSGEISAAYYRNHWRFDLEGLPSDLIRRGVAVEDATQPHGVRLLIEDYPYANDGLLLWSAIRSWVESYVQLYYPDAGTVQCDLELQGWYHESIHVGHGDLRHAPWWPPLSTPVDLASILTTLVWLASAQHAALNFGQYPLGGYVPNRPPLIR 787
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 1.839e-70 Identity = 121/201 (60.20%), Postives = 154/201 (76.62%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNRQLSV+HPIY+LL PH+R TM IN LAR+ALVNADGIIE +F G+YSME S+V Y K W F +ALP DL+ RG+AV+DPSAPHG++L IEDYP+A+DGL++WDAIK WV +YV+ YY ++ D ELQAWW E+ VGHGD K +PWW ++T ++L+E ++W+ S HAAVNFGQY YGG NRPT +R Sbjct: 527 ATNRQLSVVHPIYKLLFPHYRDTMNINSLARKALVNADGIIEKTFLWGRYSMEMSAVIY-KDWVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIKSWVQEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASAILIWIASALHAAVNFGQYPYGGLILNRPTISR 726
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.192e-69 Identity = 122/201 (60.70%), Postives = 150/201 (74.63%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNR LS +HPIY+LL PH+R TM IN LARQ+L+NADGIIE SF P K+S+E SS Y K W F +ALP DLI RG+A++DPSAPHGL+L IEDYP+A DGL++W AIK WV +YV+ YY V+ D ELQ WW E GHGD K +PWWP L+T ++L+EI T I+W S HAAVNFGQY YGG+ NRPT++R Sbjct: 541 ATNRHLSALHPIYKLLTPHYRDTMNINALARQSLINADGIIEKSFLPSKHSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSAPHGLRLLIEDYPYAVDGLEIWAAIKTWVQEYVSLYYARDDDVKPDSELQQWWKEAVEKGHGDLKDKPWWPKLQTIEELVEICTIIIWTASALHAAVNFGQYPYGGFILNRPTSSR 740
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 260.766 bits (665), Expect = 4.530e-69 Identity = 120/210 (57.14%), Postives = 147/210 (70.00%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATE-DP 629 + +RQ+S MHPI++LL PH RYT++IN LARQ L+N DG+IES F+PG ME S+ AY + WR D E LP DLI RG+AVEDPS PHGL+L IEDYP+A DGL LW AI +W YV YYP V++D ELQ+W+ E GH DK+ PWWP L TP DL ++TT+VW+ S HAA+NFGQY GGY PNRP R + E DP Sbjct: 573 AAHRQMSAMHPIFKLLKPHMRYTLKINALARQILINGDGVIESGFTPGNVCMEMSAFAYRELWRLDQEGLPADLIRRGMAVEDPSQPHGLRLLIEDYPYAADGLLLWSAISRWCEAYVAAYYPSDEAVQADYELQSWYAEAVQSGHADKRGAPWWPRLSTPGDLASLLTTLVWLCSAQHAALNFGQYPLGGYIPNRPPLMRRLVPAEGDP 782
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 4.530e-69 Identity = 116/201 (57.71%), Postives = 148/201 (73.63%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNRQLSV+HP+++LL+PHFR TM IN LARQ L+N GI E + P KY+ME SS Y W F +ALP +L RG+AVEDP APHGL+L I+DYP+A DGL++W AI+ WV DY+ +Y + +++D ELQAWW E+R GHGDKK EPWWP ++T ++L+E T I+WV S HAAVNFGQY GY PNRPT +R Sbjct: 533 ATNRQLSVLHPVFKLLEPHFRDTMNINALARQILINGGGIFEITVFPSKYAMEMSSFIYKNHWTFPDQALPAELKKRGMAVEDPEAPHGLRLRIKDYPYAVDGLEVWYAIESWVRDYIFLFYKIEEDIQTDTELQAWWKEVREEGHGDKKSEPWWPKMQTREELVESCTIIIWVASALHAAVNFGQYPVAGYLPNRPTISR 733 The following BLAST results are available for this feature:
BLAST of FC876420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876420 ID=FC876420; Name=FC876420; organism=Citrus clementina; type=EST; length=650bpback to top |