FC876420
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.009e-68 Identity = 113/201 (56.22%), Postives = 151/201 (75.12%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNRQLSV+HP+++LL PH+R TM IN LARQ L+NADGI E + PGKY++E SSV Y K W+F +ALP DL+ RG+AV DP++P+ ++L I+DYP+A DGL +W AI++WV +Y+ YYP+ ++ DEELQAWW E+R VGHGD K + WWP + T ++L T I+W+ S HAAVNFGQY Y G+ PNRPT +R Sbjct: 542 ATNRQLSVVHPVHKLLSPHYRDTMNINALARQTLINADGIFEKTVFPGKYALEMSSVVY-KNWKFTEQALPVDLVKRGVAVPDPTSPYNVRLLIKDYPYAVDGLVIWWAIERWVGEYLAIYYPNDGVLRGDEELQAWWKEVREVGHGDLKDQDWWPKMDTVQELTRACTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSR 741
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.009e-68 Identity = 119/201 (59.20%), Postives = 147/201 (73.13%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNR LS +HPIY+LL PH+R TM IN LAR +LVN GIIE +F G+YSME SS Y K W F +ALP DLI RG+A+EDPS+P G+KL +EDYP+A DGL++W IK WV DYV+ YY + D ELQAWW E+ VGHGDKK+EPWWP ++T +DLIE+ + ++W S HAAVNFGQY YGG NRPT +R Sbjct: 536 ATNRHLSCLHPIYKLLYPHYRDTMNINSLARLSLVNDGGIIEKTFLWGRYSMEMSSKVY-KNWVFTEQALPADLIKRGMAIEDPSSPCGVKLVVEDYPYAVDGLEIWAIIKTWVQDYVSLYYTSDEKLRQDSELQAWWKELVEVGHGDKKNEPWWPKMQTREDLIEVCSIVIWTASALHAAVNFGQYSYGGLILNRPTLSR 735
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 6.541e-68 Identity = 119/201 (59.20%), Postives = 148/201 (73.63%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNR LSV+HPIY+LL PH+R TM INGLAR +LVN G+IE +F G+YS+E S+V Y K W F +ALP DLI RG+A+EDPS PHG++L IEDYP+A DGL++WDAIK WV +YV YY + D ELQA W E+ VGHGDKK+EPWWP ++T ++L+E I+W S HAAVNFGQY YGG NRPT +R Sbjct: 532 ATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYAVDGLEIWDAIKTWVHEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPYGGLILNRPTLSR 731
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 255.373 bits (651), Expect = 1.903e-67 Identity = 117/201 (58.21%), Postives = 148/201 (73.63%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T+R LSV+HPIY+LL PH+R M IN LARQ+L+NA+GIIE++F P KYS+E SS Y K W F +ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK WV +YV YY V++D ELQ WW E GHGD K +PWWP L+T +DL+E+ I+W+ S HAAVNFGQY YGG NRPT +R Sbjct: 513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASR 712
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 9.446e-67 Identity = 112/201 (55.72%), Postives = 145/201 (72.14%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNRQLSV HP+Y+LL PH+R TM IN LARQ L+N GI E + PGK+++ SS Y K W F + LP DLI RG+A++DPS+P +KL I+DYP+A DGL +W AI+QWVT+Y YYP+ +++ D ELQAWW E+R VGHGD K WWP +++ +L + TTI+W+ S HAAVNFGQY Y GY PNRPT +R Sbjct: 532 ATNRQLSVTHPVYKLLQPHYRDTMTINALARQTLINGGGIFEQTVFPGKHALAMSSAVY-KNWNFTEQGLPDDLIKRGIAIKDPSSPSKVKLLIKDYPYATDGLAIWQAIEQWVTEYCAIYYPNDGVLQGDVELQAWWKEVREVGHGDLKDADWWPKMQSLPELTKACTTIIWIASALHAAVNFGQYPYAGYLPNRPTISR 731
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 7.996e-66 Identity = 116/201 (57.71%), Postives = 148/201 (73.63%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNR LSV+HPI++LL PH+R TM IN LAR LVNA+GIIES+F G Y+ME S+V Y K W F + LP DLI RG+AV+DPS+PHG++L IEDYP+A+DGL++W AIK WV +YVN YY + + D ELQA+W E+ VGHGD K WW ++ K+LIE + ++W+ S HAAVNFGQY YGGY NRPT +R Sbjct: 540 ATNRHLSVVHPIHKLLLPHYRDTMNINALARNVLVNAEGIIESTFLWGNYAMEMSAVVY-KDWVFPDQGLPNDLIKRGVAVKDPSSPHGVRLLIEDYPYASDGLEIWAAIKSWVEEYVNFYYKSDAAIAQDAELQAFWKELVEVGHGDLKSATWWFKMQNRKELIEACSILIWIASALHAAVNFGQYPYGGYILNRPTKSR 739
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.364e-65 Identity = 120/212 (56.60%), Postives = 148/212 (69.81%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDE 638 +TNR LSV+HPI++LL PHFR TM IN LAR+ L DG E+S P KYSME S+ AY K W F +ALP DL+ RG+AVED S+PHG++L I DYP+A DGL++W AIK WVT+Y YY VE D ELQAWW E+R GHGDKK E WWP L+T ++L + T I+W+ S HAA++FG Y Y GY PNRPT + CN+ E S E Sbjct: 535 ATNRHLSVLHPIHKLLHPHFRNTMNINALARETLTY-DGGFETSLFPAKYSMEMSAAAY-KDWVFPEQALPADLLKRGVAVEDLSSPHGIRLLILDYPYAVDGLEIWAAIKSWVTEYCKFYYKSDETVEKDTELQAWWKELREEGHGDKKDEAWWPKLQTRQELRDCCTIIIWIASALHAALHFGLYSYAGYLPNRPTLS-CNLMPEPGSVE 743
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 3.969e-65 Identity = 109/201 (54.23%), Postives = 148/201 (73.63%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 STNR LSV HP+++LL PH+R TM IN LARQ L+NA GI E + PGK+++ S+V Y K W+F + LP DLI RG+AVEDPS+P+ ++L + DYP+A DGL +W AI+Q+V++Y+ YYP+ +++ D E+QAWW E R VGHGD K PWWP +++ +L + TTI+W+ S HAAVNFGQY Y G+ PNRPT +R Sbjct: 531 STNRHLSVTHPVHKLLSPHYRDTMTINALARQTLINAGGIFEMTVFPGKFALGMSAVVY-KDWKFTEQGLPDDLIKRGMAVEDPSSPYKVRLLVSDYPYAADGLAIWHAIEQYVSEYLAIYYPNDGVLQGDTEVQAWWKETREVGHGDLKDAPWWPKMQSVPELAKACTTIIWIGSALHAAVNFGQYPYAGFLPNRPTVSR 730
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.183e-65 Identity = 111/201 (55.22%), Postives = 144/201 (71.64%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNRQLSV HP+++LL PH+R TM IN LARQ L+NA GI E + PGKY++ SS+ Y K W F + LP DLI RG+AVED ++P+ ++L I+DYP+A DGL++W AI+QWV +Y+ YY D ++ D ELQAWW E+R VGHGD K WWP + +L + TTI+W+ S HAAVNFGQY Y GY PNRPT +R Sbjct: 535 ATNRQLSVTHPVHKLLSPHYRDTMTINALARQTLINAGGIFEMTVFPGKYALWMSSMVY-KNWNFTEQGLPADLIKRGVAVEDATSPYKVRLLIKDYPYAADGLEIWHAIEQWVGEYLAIYYTDDGVLRGDAELQAWWAEVREVGHGDLKGAAWWPRMDAVSELRDACTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSR 734
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 6.769e-65 Identity = 110/201 (54.73%), Postives = 146/201 (72.64%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNRQLSV HP+++LL PH+R TM IN LARQ L+N GI E + P K+++ SS Y K W F +ALP DL+ RG+AV DP++P+ ++L IEDYP+ANDGL +W AI+QW T+Y+ YYP+ +++ D ELQAWW E+R VGHGD K WWP +KT +L++ TI+W+ S HAAVNFGQY Y GY PNRP+ +R Sbjct: 539 ATNRQLSVAHPVHKLLLPHYRDTMTINALARQTLINGGGIFEMTVFPRKHALAMSSAFY-KDWSFADQALPDDLVKRGVAVPDPASPYKVRLLIEDYPYANDGLAVWHAIEQWATEYLAIYYPNDGVLQGDAELQAWWKEVREVGHGDIKDATWWPEMKTVAELVKACATIIWIGSALHAAVNFGQYPYAGYLPNRPSVSR 738 The following BLAST results are available for this feature:
BLAST of FC876420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876420 ID=FC876420; Name=FC876420; organism=Citrus clementina; type=EST; length=650bpback to top |