FC876420
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.970e-64 Identity = 116/202 (57.43%), Postives = 148/202 (73.27%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTM-EINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +TNRQLSV+HPI +LL PH+R TM IN LAR +L+NA+G+IE SF P KY++E SS Y K W F +ALP DLI R +AV+D S+P+GL+L IEDYP+A DGL++W AIK WV DYV+ YY + +++D ELQ WW E+ GHGD K +PWWP L+T +L+E+ T I+W S HAAVNFGQY YGG NRPT +R Sbjct: 538 ATNRQLSVVHPINKLLAPHYRDTMMNINALARDSLINANGLIERSFLPSKYAVEMSSAVY-KYWVFTDQALPNDLIKRNMAVKDSSSPYGLRLLIEDYPYAVDGLEIWTAIKTWVQDYVSLYYATDNDIKNDSELQHWWKEVVEKGHGDLKDKPWWPKLQTFDELVEVCTIIIWTASALHAAVNFGQYPYGGLILNRPTLSR 738
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOXE3_HUMAN (Epidermis-type lipoxygenase 3 OS=Homo sapiens GN=ALOXE3 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.425e-30 Identity = 69/201 (34.33%), Postives = 115/201 (57.21%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T RQL + HPIY+LL PH RYT+++N +AR L+N +G+++ S G+ + + + + + LP L +RG+ L I +Y + +DGL +W AI+ +V++ V +YYP + V+ D ELQAW EI ++ + L TP ++++ +T I++ S HAAVN GQ+ +G + PN P++ R Sbjct: 422 ATLRQLPLCHPIYKLLLPHTRYTLQVNTIARATLLNPEGLVDQVTSIGRQGLIYLMSTGLAHFTYTNFCLPDSLRARGV------------LAIPNYHYRDDGLKIWAAIESFVSEIVGYYYPSDASVQQDSELQAWTGEIFAQAFLGRESSGFPSRLCTPGEMVKFLTAIIFNCSAQHAAVNSGQHDFGAWMPNAPSSMR 610
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOXE3_MOUSE (Epidermis-type lipoxygenase 3 OS=Mus musculus GN=Aloxe3 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.174e-30 Identity = 69/201 (34.33%), Postives = 116/201 (57.71%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T RQL + HP+Y+LL PH RYT+++N +AR L+N DG+++ S G+ + + + + LP + +RG+ LTI +Y + +DGL +W AI+++V++ V++YYP + V+ D ELQAW EI ++ + L TP +L++ +T I++ S HAA N GQ+ +G + PN P++ R Sbjct: 422 ATLRQLPLCHPVYKLLLPHTRYTLQVNTIARATLLNPDGLVDKVTSIGRQGLIYLMSTGLAHFTYTDFCLPDSIRARGV------------LTIPNYHYRDDGLKIWAAIERFVSEIVSYYYPSDASVQQDCELQAWVGEIFAQAFLGRESSGFPSRLCTPGELVKYLTAIIFNCSAQHAAFNSGQHDFGAWMPNAPSSMR 610
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LX15B_MOUSE (Arachidonate 15-lipoxygenase B OS=Mus musculus GN=Alox15b PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.194e-26 Identity = 71/199 (35.68%), Postives = 108/199 (54.27%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTT 599 +T RQL HP+++LL PH RYT+ IN LAR+ LV +I+ S G +Q + LP+D+ +RG VED I Y + +DG+ +W AIK +V++ V+ YYP + V+ D+ELQAW EI + G ++ +L T + L++ IT +++ S HAAV+ GQ+ + PN P T Sbjct: 388 ATLRQLPRCHPLFKLLIPHIRYTLHINTLARELLVAPGKLIDKSTGLGTGGFSDLIKRNMEQLNYSVLCLPEDIRARG--VED----------IPGYYYRDDGMQIWGAIKSFVSEIVSIYYPSDTSVQDDQELQAWVREIFSEGFLGRESSGMPSLLDTREALVQYITMVIFTCSAKHAAVSSGQFDSCVWMPNLPPT 574
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LX12B_HUMAN (Arachidonate 12-lipoxygenase, 12R type OS=Homo sapiens GN=ALOX12B PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.057e-25 Identity = 65/198 (32.83%), Postives = 103/198 (52.02%), Query Frame = 3 Query: 12 RQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 R L + HP+Y+LL PH RYT++IN + R L+N G+ S G V + +D LP D + RG V+D + Y + +D L +W+A++++VT+ + +YYP + VE D ELQ+W EI ++ + L+T +LI +T +++ S HAAVN GQ + + PN P + R Sbjct: 415 RNLPMCHPLYKLLIPHTRYTVQINSIGRAVLLNEGGLSAKGMSLGVEGFAGVMVRALSELTYDSLYLPNDFVERG--VQD----------LPGYYYRDDSLAVWNALEKYVTEIITYYYPSDAAVEGDPELQSWVQEIFKECLLGRESSGFPRCLRTVPELIRYVTIVIYTCSAKHAAVNTGQMEFTAWMPNFPASMR 600
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LX12B_RAT (Arachidonate 12-lipoxygenase, 12R type OS=Rattus norvegicus GN=Alox12b PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.354e-25 Identity = 65/198 (32.83%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 12 RQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 R L + HP+Y+LL PH RY ++IN + R L+N G+ + S G V + + +P D + RG V+D + Y F +D L +W A++++VT+ + +YYP+ + VE D ELQ W EI +++ + L+T +LIE +T +++ S HAAVN GQ Y + PN P++ R Sbjct: 415 RNLPMCHPLYKLLIPHTRYNVQINSIGRALLLNKGGLSARAMSLGLEGFAQVMVRGLSELTYKSLCIPNDFVERG--VQD----------LPGYYFRDDSLAVWYAMERYVTEIITYYYPNDAAVEGDPELQCWVQEIFKECLLERESSGFPTCLRTVPELIEYVTMVMYTCSARHAAVNTGQLEYTSWMPNFPSSMR 600
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LX12B_MOUSE (Arachidonate 12-lipoxygenase, 12R type OS=Mus musculus GN=Alox12b PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.848e-25 Identity = 65/198 (32.83%), Postives = 103/198 (52.02%), Query Frame = 3 Query: 12 RQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 R L + HP+Y+LL PH RY ++IN + R L+N G+ + S G V + + +P D + RG V+D + Y F +D L +W A++++VT+ + +YYP+ + VE D ELQ W EI ++ + L+T +LIE +T +++ S HAAVN GQ Y + PN P++ R Sbjct: 415 RNLPMCHPLYKLLIPHTRYNVQINSIGRALLLNKGGLSARAMSLGLEGFAQVMVRGLSELTYKSLCIPNDFVERG--VQD----------LPGYYFRDDSLAVWYAMERYVTEIITYYYPNDAAVEGDPELQCWVQEIFKECLLGRESSGFPTCLRTIPELIEYVTMVMYTCSARHAAVNSGQLEYTSWMPNFPSSMR 600
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LX15B_HUMAN (Arachidonate 15-lipoxygenase B OS=Homo sapiens GN=ALOX15B PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.399e-24 Identity = 65/197 (32.99%), Postives = 106/197 (53.81%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRP 593 +T RQL HP+++LL PH RYT+ IN LAR+ L+ +++ S G KQ + LP+D+ +RG VED I Y + +DG+ +W A++++V++ + YYP V+ D ELQAW EI + G +++ L+T + L++ +T +++ S HAAV+ GQ+ + PN P Sbjct: 387 ATLRQLPHCHPLFKLLIPHTRYTLHINTLARELLIVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRG--VED----------IPGYYYRDDGMQIWGAVERFVSEIIGIYYPSDESVQDDRELQAWVREIFSKGFLNQESSGIPSSLETREALVQYVTMVIFTCSAKHAAVSAGQFDSCAWMPNLP 571
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LX15B_RAT (Arachidonate 15-lipoxygenase B OS=Rattus norvegicus GN=Alox15b PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.426e-22 Identity = 60/197 (30.46%), Postives = 102/197 (51.78%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRP 593 +T RQL HP+++LL PH RYT+ IN LAR+ L+ +++ S G +Q + LP+D+ +R + + Y + +DG+ +W AI+ +V++ V+ YYP + V D+ELQAW EI + G ++ +L T + L++ +T +++ S HAAV+ Q+ + PN P Sbjct: 388 ATLRQLPHCHPLFKLLIPHTRYTLHINTLARELLIAPGKVVDKSTGLGIGGFSDLIKRNMEQLSYSVLCLPEDIRARDVG------------DLPGYYYRDDGMQIWSAIRSFVSEIVDIYYPSDASVRDDQELQAWVGEIFSEGFLSQESSGMPSLLDTQEALVQYVTMVIFTCSAKHAAVSASQFDSCVWMPNLP 572
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX5_MESAU (Arachidonate 5-lipoxygenase OS=Mesocricetus auratus GN=ALOX5 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 9.256e-22 Identity = 63/204 (30.88%), Postives = 106/204 (51.96%), Query Frame = 3 Query: 12 RQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGL-AVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIAT 620 RQL +HPI++LL H R+T+ IN AR+ L+ G+ + + + G + + P+ + +RG+ + ED I Y + +DGL +W+AI+ + ++ V+ YY D +V D+ELQ + ++ G +K + +K+ + L E +T +++ S HAAVNFGQY + + PN P T R AT Sbjct: 384 RQLPAVHPIFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQDLTYSSLCFPEAIKARGMDSTED----------IPYYFYRDDGLLVWEAIQSFTSEVVSIYYEDDQVVMEDQELQDFVKDVYVYGMRGRKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPAT 577 The following BLAST results are available for this feature:
BLAST of FC876420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876420 ID=FC876420; Name=FC876420; organism=Citrus clementina; type=EST; length=650bpback to top |