FC876420
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX5_RAT (Arachidonate 5-lipoxygenase OS=Rattus norvegicus GN=Alox5 PE=1 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 2.693e-21 Identity = 62/199 (31.16%), Postives = 103/199 (51.76%), Query Frame = 3 Query: 12 RQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLA-VEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 RQL +HP+++LL H R+T+ IN AR+ L G+ + + + G + + P+ + +RG+ ED I Y + +DGL +W+AI+ + T+ V+ YY D +VE D+ELQ + ++ G +K + +K+ + L E +T +++ S HAAVNFGQY + + PN P T R Sbjct: 384 RQLPAVHPLFKLLVAHVRFTIAINTKAREQLNCEYGLFDKANATGGGGHVQMVQRAVQDLTYSSLCFPEAIKARGMDNTED----------IPYYFYRDDGLLVWEAIQSFTTEVVSIYYEDDQVVEEDQELQDFVKDVYVYGMRGRKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMR 572
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX5_MOUSE (Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alox5 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.693e-21 Identity = 61/201 (30.35%), Postives = 103/201 (51.24%), Query Frame = 3 Query: 12 RQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPF---ANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 RQL +HP+++LL H R+T+ IN AR+ L+ G+ + + + G + + P+ + +RG+ + ED PF +DGL +W+AI+ + + V+ YY + +VE D+ELQ + ++ G KK + +K+ + L E +T +++ S HAAVNFGQY + + PN P T R Sbjct: 385 RQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQDLTYSSLCFPEAIKARGMD------------STEDMPFYFYRDDGLLVWEAIQSFTMEVVSIYYENDQVVEEDQELQDFVKDVYVYGMRGKKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMR 573
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX5_HUMAN (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.693e-21 Identity = 60/198 (30.30%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 12 RQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 RQL +HPI++LL H R+T+ IN AR+ L+ G+ + + + G K + P+ + +RG+ ++ I Y + +DGL +W+AI+ + + V+ YY +VE D ELQ + ++ G +K + +K+ + L E +T +++ S HAAVNFGQY + + PN P T R Sbjct: 385 RQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAIKARGMESKED---------IPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMR 573
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX12_MOUSE (Arachidonate 12-lipoxygenase, 12S-type OS=Mus musculus GN=Alox12 PE=1 SV=4) HSP 1 Score: 101.679 bits (252), Expect = 3.517e-21 Identity = 66/201 (32.84%), Postives = 93/201 (46.27%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T R L +HPI++LL PH RYTMEIN +R L++ GI + S G Q + P DL +RGL L I +A D L LW+ ++V V+ +Y +V D ELQAW EI VG + + ++ L +T V+ + HAA+N GQ + G+ PN P T R Sbjct: 374 ATMRCLPGLHPIFKLLVPHIRYTMEINTRSRTQLISDGGIFDQVVSTGGGGHVQLLTRAVAQLTYHSLCPPDDLANRGL------------LRIPSALYARDALQLWEVTARYVKGMVHLFYQSDDIVRGDPELQAWCREITEVGLCHAQDRGFPVSFQSRAQLCHFLTMCVFTCTAQHAAINQGQLDWYGWVPNAPCTMR 562
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX_PSEAE (Oleic acid lipoxygenase OS=Pseudomonas aeruginosa GN=lox PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.999e-21 Identity = 66/194 (34.02%), Postives = 102/194 (52.58%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFP 584 +T R L+ HP++ LL PHF T+ +N A + L+ + G I+ F+ + ++ + F LP+ L +R V+DP+A + DYP+ +DGL +W+AI+QW DYV YY V +D EL AW E+ +G G K + P+ L+E++T +++ S HAAVNF Q Y P Sbjct: 391 ATQRTLAPSHPLHVLLAPHFEGTLFVNEGAARILLPSAGFIDVMFAAPIQDTQATAGGNRLGFDFYRGMLPESLKARN--VDDPAA-------LPDYPYRDDGLLVWNAIRQWAADYVAVYYASDGDVTADVELAAWVGEV--IGSG--KVAGFRPITGR-SQLVEVLTMVIFTASAQHAAVNFPQPSMMTYAP 570
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOXA_PSEAE (Arachidonate 15-lipoxygenase OS=Pseudomonas aeruginosa GN=loxA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.999e-21 Identity = 67/194 (34.54%), Postives = 101/194 (52.06%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFP 584 +T R L+ HP++ LL PHF T+ IN A + L+ + G I+ F+ + ++ + F LP+ L +R V+DP L + DYP+ +DGL +W+AI+QW DYV YY V +D EL AW E+ +G G K + P+ L+E++T +++ S HAAVNF Q Y P Sbjct: 391 ATQRTLAPSHPLHVLLAPHFEGTLFINEGAARILLPSAGFIDVMFAAPIQDTQATAGGNRLGFDFYRGMLPESLKARN--VDDP-------LALPDYPYRDDGLLVWNAIRQWAADYVAVYYASDGDVTADVELAAWVGEV--IGSG--KVAGFRPITGR-SQLVEVLTMVIFTASAQHAAVNFPQPSMMTYAP 570
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LX12E_MOUSE (Arachidonate 12-lipoxygenase, epidermal-type OS=Mus musculus GN=Alox12e PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.836e-21 Identity = 66/201 (32.84%), Postives = 96/201 (47.76%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T R L +HPIY+LL PHFRYTMEIN LAR LV+ GI + S G + P DL RGL G+K ++ +A D L LW+ I ++V V +Y + V+ D ELQ W E+ VG + + L++ +L + ++ +G HA+ + GQ + + PN P T R Sbjct: 374 ATMRSLPSLHPIYKLLAPHFRYTMEINTLARNNLVSEWGIFDLVVSTGSGGHVDILQRATSCLTYRSFCPPDDLADRGLV--------GVKSSL----YAQDALRLWEIISRYVERMVELFYRSDTDVKEDPELQVWCREVTEVGLLGAQDRGFPLSLESRAELCRFVAMCIFTCTGQHASTHLGQLDWYAWIPNGPCTMR 562
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX12_HUMAN (Arachidonate 12-lipoxygenase, 12S-type OS=Homo sapiens GN=ALOX12 PE=1 SV=4) HSP 1 Score: 98.5969 bits (244), Expect = 2.977e-20 Identity = 65/201 (32.34%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T R L +HPI++ L PH RYTMEIN AR L++ GI + + S G Q + P DL RGL L + +A+D L LW+ I ++V V+ +Y +V+ D ELQAW EI VG + + ++ L +T V+ + HAA+N GQ + + PN P T R Sbjct: 374 ATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTGGGGHVQLLRRAAAQLTYCSLCPPDDLADRGL------------LGLPGALYAHDALRLWEIIARYVEGIVHLFYQRDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMR 562
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX12_PIG (Arachidonate 12-lipoxygenase, 12S-type OS=Sus scrofa GN=ALOX12 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.930e-19 Identity = 69/205 (33.66%), Postives = 100/205 (48.78%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW---WTEIRTVGHGDKKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T R L +HPI++LL PHFRYTMEIN AR LV+ GI + S G + P DL RGL L +E +A D L LW+ I ++V V+ +Y V+ D ELQAW +TEI +G D+ +PV L++ + L +T ++ +G H++ + GQ + + PN P T R Sbjct: 375 ATMRCLPSIHPIFKLLIPHFRYTMEINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAAALLTYSSFCPPDDLADRGL------------LGVESSFYAQDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDR----GFPVSLQSKEQLCHFVTMCIFTCTGQHSSNHLGQLDWYTWVPNAPCTMR 563
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: AOSL_PLEHO (Allene oxide synthase-lipoxygenase protein OS=Plexaura homomalla PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.578e-19 Identity = 63/206 (30.58%), Postives = 104/206 (50.49%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIR----TVGHGDKKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 ST R L+ HP+++LL PH + I+ + R+ L+ + GI++ S S G K+ LP L RG V+DPS G + + +DGL LW+AI+ ++ + + +Y + V+ D E+Q+W ++ V G + H P ++ + L E++T++V+ S HAAVNF Q + G+ PN P R Sbjct: 771 STWRNLASAHPVFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYHLPNALKKRG--VDDPSKLPG-------FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGV--PASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLR 965 The following BLAST results are available for this feature:
BLAST of FC876420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876420 ID=FC876420; Name=FC876420; organism=Citrus clementina; type=EST; length=650bpback to top |