FC876420
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX15_RABIT (Arachidonate 15-lipoxygenase OS=Oryctolagus cuniculus GN=ALOX15 PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.634e-18 Identity = 59/201 (29.35%), Postives = 92/201 (45.77%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T R L +HP+++L+ PH RYT+EIN AR LV+ GI + S G + P DL RGL L +E +A D L LW+ I ++V + YY V D ELQ+W EI +G + + + L++ +T ++ +G H++++ GQ + + PN P T R Sbjct: 375 ATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFCPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMR 563
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX15_PONAB (Arachidonate 15-lipoxygenase OS=Pongo abelii GN=ALOX15 PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.634e-18 Identity = 61/201 (30.35%), Postives = 93/201 (46.27%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T R L +HPI++L+ PH RYT+EIN AR LV+ GI + S G + P DL RGL L ++ +A D L LW+ I ++V V+ +Y V+ D ELQ W EI +G + + L++ + +T ++ +G HA+V+ GQ + + PN P T R Sbjct: 374 ATMRCLPSIHPIFKLIIPHLRYTLEINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGL------------LGVKSSFYAQDALRLWEIIYRYVEGIVSLHYKTDVAVKDDPELQTWCREITEIGLQGAQDRGFPVSLQSRDQVCHFVTMCIFTCTGQHASVHLGQLDWYSWVPNAPCTMR 562
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX12_RABIT (Arachidonate 12-lipoxygenase, 12S-type OS=Oryctolagus cuniculus GN=ALOX12 PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.634e-18 Identity = 59/201 (29.35%), Postives = 92/201 (45.77%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T R L +HP+++L+ PH RYT+EIN AR LV+ GI + S G + P DL RGL L +E +A D L LW+ I ++V + YY V D ELQ+W EI +G + + + L++ +T ++ +G H++++ GQ + + PN P T R Sbjct: 375 ATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFCPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMR 563
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX15_HUMAN (Arachidonate 15-lipoxygenase OS=Homo sapiens GN=ALOX15 PE=1 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 2.134e-18 Identity = 61/201 (30.35%), Postives = 92/201 (45.77%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T R L +HPI++L+ PH RYT+EIN AR LV+ GI + S G + P DL RGL L ++ +A D L LW+ I ++V V+ +Y V+ D ELQ W EI +G + + L+ + +T ++ +G HA+V+ GQ + + PN P T R Sbjct: 374 ATMRCLPSIHPIFKLIIPHLRYTLEINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGL------------LGVKSSFYAQDALRLWEIIYRYVEGIVSLHYKTDVAVKDDPELQTWCREITEIGLQGAQDRGFPVSLQARDQVCHFVTMCIFTCTGQHASVHLGQLDWYSWVPNAPCTMR 562
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LOX12_BOVIN (Arachidonate 12-lipoxygenase, 12S-type OS=Bos taurus GN=ALOX12 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.787e-18 Identity = 59/201 (29.35%), Postives = 92/201 (45.77%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T R L +HP+++LL PH RYTMEIN AR LV+ G+ + S G + P DL RGL L ++ +A D L LW+ + ++V V+ +Y V D ELQAW +I +G + + L++ L +T ++ +G H++ + GQ + + PN P T R Sbjct: 375 ATMRCLPSIHPMFKLLIPHLRYTMEINIRARTGLVSDSGVFDQVVSTGGGGHVELLQRAGAFLTYSSFCPPDDLADRGL------------LGVKSSFYAQDALRLWEILSRYVEGIVSLHYKTDESVRDDIELQAWCRDITEIGLLGAQDRGFPVTLQSKDQLCHFVTMCIFTCTGQHSSTHLGQLDWYSWVPNAPCTMR 563
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LX12L_MOUSE (Arachidonate 12-lipoxygenase, leukocyte-type OS=Mus musculus GN=Alox12l PE=1 SV=4) HSP 1 Score: 87.0409 bits (214), Expect = 8.965e-17 Identity = 57/201 (28.36%), Postives = 88/201 (43.78%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T R L +HP+++LL PH YTMEIN AR L++ G + S G + P DL RGL L I+ +A D L LW + ++V + YY V+ D ELQ+W EI +G + + L++ IT ++ + H++++ GQ + + PN P T R Sbjct: 375 ATMRCLPSVHPVFKLLVPHLLYTMEINVRARSDLISERGFFDKVMSTGGGGHLDLLKQAGAFLTYSSLCPPDDLAERGL------------LDIDTCFYAKDALQLWQVMNRYVVGMFDLYYKTDQAVQDDYELQSWCQEITEIGLQGAQDRGFPTSLQSRAQACHFITMCIFTCTAQHSSIHLGQLDWFYWVPNAPCTMR 563
BLAST of FC876420 vs. ExPASy Swiss-Prot
Match: LX12L_RAT (Arachidonate 12-lipoxygenase, leukocyte-type OS=Rattus norvegicus GN=Alox12l PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.171e-16 Identity = 59/201 (29.35%), Postives = 89/201 (44.28%), Query Frame = 3 Query: 3 STNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 605 +T R L +HP+++LL PH YTMEIN AR L++ G + + S G + P DL RGL L IE +A D L LW + ++V N +Y V+ D ELQ+W EI +G + + L++ IT ++ + H++V+ GQ + + PN P T R Sbjct: 375 ATMRCLPSVHPVFKLLVPHLLYTMEINVRARSDLISERGFFDKAMSTGGGGHLDLLKQAGAFLTYCSLCPPDDLAERGL------------LDIETCFYAKDALRLWQIMNRYVVGMFNLHYKTDKAVQDDYELQSWCREITDIGLQGAQDRGFPTSLQSRAQACYFITMCIFTCTAQHSSVHLGQLDWFYWVPNAPCTMR 563 The following BLAST results are available for this feature:
BLAST of FC876420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876420 ID=FC876420; Name=FC876420; organism=Citrus clementina; type=EST; length=650bpback to top |