FC876421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: ARAE3_ORYSJ (Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 50/171 (29.24%), Postives = 85/171 (49.71%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY 650 ++L+TG AG+I SH RL+++ Y++ ++D L + L+ L P +F+ D+ VN + + D +MHFAA +V S + N T ++LEA G ++ I+ ST YGE ++ +V E ++ LP NPY K AE +++ + Sbjct: 65 HVLVTGGAGYIGSHASLRLLKD--NYRVTIVDNLSRGNMGAVKVLQELFPQPG--RLQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHG-VKTLIYSSTCATYGEPEKMPIV---ETTRQLPINPYGKAKKMAEDIILDF 227
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: ARAE2_ARATH (Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana GN=At2g34850 PE=2 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 49/174 (28.16%), Postives = 86/174 (49.43%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY-----CSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 659 ++L+TG AG+I SH RL+++ Y++ ++D L L+ L P +F+ D+ A+ VN + + D +MHFAA +V S ++ N T V+LE G ++ I+ ST YGE ++ + E + +P NPY K AE +++ + ++ Sbjct: 71 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNLGAVKILQQLFPEPGK--LQFIYADLGDANAVNKIFSENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHG-VKTLIYSSTCATYGEPEKMPIT---EETPQVPINPYGKAKKMAEDIILDFSKN 236
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: EXOB_AZOBR (UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.833e-13 Identity = 55/177 (31.07%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 138 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 668 T +L+TG AG+I SHV + L V +D D + + IP+ V+GDI SA+L++ ++ +D +MHFA V S ++ +NN + LL AC G I + + ST VYG + V E + +P NPY A+K E ++ G ++GL Sbjct: 5 TAASPRVLVTGGAGYIGSHVLHALTD--AGIPAVTID--DLSAGRREAIPAAVP----LVEGDIGSAELLDRVMRDHRVDAVMHFAGSIVVPESVVKPLDYYRNNTANSLTLLGACLRAG-IDKVVFSSTAAVYGAPES---VPIREDAPTVPINPYGASKLMTEQMLRDAGAAHGL 169
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: ARAE2_ORYSJ (Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UEL-2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13 Identity = 52/180 (28.89%), Postives = 85/180 (47.22%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 677 ++L+TG AG+I SH RL+R+ Y++ ++D L + L+ L P +F+ D+ A VN + + D +MHFAA +V S + N T +LEA ++ I+ ST YGE D + EA+ P NPY K AE +++ + + + V+ Sbjct: 51 HVLVTGGAGYIGSHATLRLLRD--NYRVTIVDNLSRGNMGAVRVLQRLFPEPG--RLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEA-MAAYNVKTLIYSSTCATYGEPDTMPIT---EATPQNPINPYGKAKKMAEDIILDFSKRSEMAVM 222
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: ARAE1_ORYSJ (Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UEL-1 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 49/174 (28.16%), Postives = 83/174 (47.70%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 659 ++L+TG AG+I SH RL+++ +++ ++D L + L+NL +F+ D+ VN + + D +MHFAA +V S + N T V+LEA +R I+ ST YGE ++ + E + P NPY K AE +++ + +S Sbjct: 74 HVLVTGGAGYIGSHAALRLLKD--SFRVTIVDNLSRGNMGAIKVLQNLFSEPG--RLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEA-MAAHNVRTLIYSSTCATYGEPEKMPIT---EGTPQFPINPYGKAKKMAEDIILDFSKS 239
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 60/188 (31.91%), Postives = 86/188 (45.74%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKFV-KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIH-PWKTCYGP 704 ++L+TGA GF+ SHV L + +V LD + Y +LK S SS FV +GD+ A L+ L + +MH AAQ V + N + +NI G LLE CK + S+ VYG ++ + Q P + Y+ATK E + Y YGL + + T YGP Sbjct: 89 SVLVTGATGFVGSHVSLALRKRGDG--VVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQ--PASLYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGP 272
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: RFBE_SALTI (CDP-paratose 2-epimerase OS=Salmonella typhi GN=rfbE PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 56/196 (28.57%), Postives = 91/196 (46.43%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDE-------------DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL-PVIHPWKTCYG 701 +LITG GF+ S++ + + + ++V D L NL + NF+FV GDI + + V L+ D+ H A Q + S N + N+ GT LLEA + I+ ST++VYG+ ++ D G E++QL +PY +K A+ ++ Y R +GL V+ + YG Sbjct: 3 LLITGGCGFLGSNLASFALSQGID--LIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYG 196
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 56/187 (29.95%), Postives = 90/187 (48.13%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLK-NLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIH-PWKTCYGP 704 ILITG AGFI SH+ +LI+ + ++ +D ++ Y +LK + + S NF F K + + D ++ + + E + +++ AAQ V S N + +NI G +LE C I+ I+ S+ VYG + P + Y+ATK E++ Y Y LP + T YGP Sbjct: 3 ILITGTAGFIGSHLAKKLIKQ--GHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVKLENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILE-CSRHFNIQNLIYASSSSVYGANTSKPFSTSDNIDH--PLSLYAATKKSNELMAHTYSHLYNLPTTGLRFFTVYGP 184
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: ARAE4_ARATH (Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana GN=At5g44480 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 48/180 (26.67%), Postives = 88/180 (48.89%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD-----YCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 677 ++L+TG AG+I SH RL+R+ Y++ ++D L L+ L P + +F+ D+ V + + D +MHFAA +V S ++ N T +LEA ++++ I+ ST YGE ++ + E + +P NPY K AE +++ + ++ + V+ Sbjct: 96 HVLVTGGAGYIGSHAALRLLRD--SYRVTIVDNLSRGNLGAVKTLQQLFPQ--TGRLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEA-MARHKVKKLIYSSTCATYGEPEKMPIT---EDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVM 267
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_LACCA (UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 54/174 (31.03%), Postives = 84/174 (48.28%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 677 I + G AG+I SH +L+ + +VVLD L + + + +A +F +GDI ++ + E ID I+HFAA + V S + ++ NN G LLEA G I++ + ST YGE + V E +PTNPY +K E ++ +YGL + Sbjct: 3 IAVLGGAGYIGSHTVKQLLAAGED--VVVLDNL--ITGHRKAVDPRA----RFYQGDIRDYHFLSQVFSQEKIDGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFG-IKKIVFSSTAATYGEPKQ---VPIKETDPQVPTNPYGESKLAMEKIMHWADVAYGLKFV 164 The following BLAST results are available for this feature:
BLAST of FC876421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876421 ID=FC876421; Name=FC876421; organism=Citrus clementina; type=EST; length=706bpback to top |