FC876421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_KLEPN (UDP-glucose 4-epimerase (Fragment) OS=Klebsiella pneumoniae GN=galE PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 40/133 (30.08%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE 545 +L+TG +G+I SH C +L++ +++V+LD L C++ + ++P F++GDI + + +L +I+ ++HFA V S E+ NN+ GT L+ A + G ++ FI S+ VYG+ Sbjct: 3 VLVTGGSGYIGSHTCVQLLQR--GHEVVILDNL--CNSKRRILPVIERLGGKEATFIEGDIRNEARMTEILHDHAIEAVIHFAGLKAVGESVAKPLEYYDNNVTGTLKLVSAMRAAG-VKNFIFSSSATVYGD 130
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_NEIMA (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup A GN=galE PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 49/172 (28.49%), Postives = 85/172 (49.42%), Query Frame = 3 Query: 150 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGET-----DEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 KNIL+TG GFI SH L+++ +++V+LD L C++ N++P + F +GDI +++ + ID+++HFA V S ++ NN+ G+ VL E G + + S+ VYG+ ED +G+ T+PY +K+ E ++ Sbjct: 2 KNILVTGGTGFIGSHTVVSLLKS--GHQVVILDNL--CNSSINILPRLKTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAG-VFSIVFSSSATVYGDPGKVPYTEDMPLGD-------TTSPYGTSKSMVERIL 161
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_NEIGO (UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 49/165 (29.70%), Postives = 79/165 (47.88%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK---ASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 +LITG GFI SH L+++ Y V+LD L C++ ++P N F +GDI ++ + I++++HFA V S ++ NN+YG+ VL E G + + + S+ VYG D + V + NPY A+KA E ++ Sbjct: 3 VLITGGTGFIGSHTAVSLVQS--GYDAVILDNL--CNSSAAVLPRLRQITGRNIPFYQGDIRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVYGSLVLAEEMARAG-VLKIVFSSSATVYG--DAEKVPYTEDMRPGDTANPYGASKAMVERML 160
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_LACHE (UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 668 +L+ G AG+I SH L++ + ++VLD L Y + K + P KF +GDI LV+ +L E ID +MHFAA + V S ++ NN+ G LL+A ++ + S+ YG + + E + L P NPY TK E ++ ++ G+ Sbjct: 3 VLVIGGAGYIGSHAVRELVKEGND--VLVLDAL-YTGHRKAVDPKA-----KFYQGDIEDTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMN-DANVKYLVFSSSAATYGIPKKLPIT---EDTPLNPINPYGETKMMMEKIMAWADKADGI 161
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GAL10_SCHPO (Bifunctional protein gal10 OS=Schizosaccharomyces pombe GN=gal10 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 51/164 (31.10%), Postives = 81/164 (49.39%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-DYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 IL+TG AG+I SH LI + YK++++D L + C + + + KF K D+ + + + T I ++HFAA V S E+ NNI GT LL + +++ + S+ VYG+ T D ++ E+ PTNPY TK E ++ Sbjct: 8 ILVTGGAGYIGSHTVIELINH--GYKVIIVDNLCNSCYDAVARVEFIVRKSIKFFKLDLRDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMR-EHRVKTVVFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENII 168
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 58/187 (31.02%), Postives = 83/187 (44.39%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKAS-SNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIH-PWKTCYGP 704 +L+TGAAGF+ +HV L R ++ LD + Y +LK + S V+GDI +L+ L S +MH AAQ V + N + +NI G LLE CK + S+ VYG + + Q P + Y+ATK E + Y YGL + + T YGP Sbjct: 99 VLVTGAAGFVGTHVSAALKRRGDG--VIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGP 281
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: EXOB_RHIME (UDP-glucose 4-epimerase OS=Rhizobium meliloti GN=exoB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 59/178 (33.15%), Postives = 77/178 (43.26%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK------GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 668 NIL+ G AG+I SH C +L Y+ VV D L ++ + +FVK GDI ++ +L I+HFAA V S + F NN+ GT LL A G I F+ ST YG D V E+ + P NPY TK E + YG GL Sbjct: 5 NILVVGGAGYIGSHTCLQLAAK--GYQPVVYDNL-------------SNGHEEFVKWGVLEKGDIRDRQRLDEVLARHKPRAILHFAAMIEVGESVKDPAAFYDNNVIGTLTLLSAALAAG-IDAFVFSSTCATYGLPDS---VPMDESHKQAPINPYGRTKWICEQALKDYGLYKGL 163
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_ERWAM (UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 51/171 (29.82%), Postives = 81/171 (47.37%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK-NLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQL-LPTNPYSATKAGAEMLVMAYGRS 659 +IL+TG AG+I SH L++ + +V+LD L S N + F +GD+ + + I ++HFA V S E+ +NN+ GT VLLE + G + +FI S+ VYG DA V E + + T+PY +K E ++ Y ++ Sbjct: 2 SILVTGGAGYIGSHTVLSLLQRGDD--VVILDNLSNASRESINRVEKLTGKTATFFEGDLLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAG-VNQFIFSSSATVYG---ADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKA 166
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_STRMU (UDP-glucose 4-epimerase OS=Streptococcus mutans GN=galE PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 52/175 (29.71%), Postives = 85/175 (48.57%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLL-ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 677 IL+ G AG+I SH+ +RLI E ++VV+D L + + P+ KF +GD+A + ++ + +D ++HFAA + V S ++ NN G LLE G ++ + ST YG DE + E + P NPY +K E ++ R+YG+ + Sbjct: 3 ILVLGGAGYIGSHMVDRLIEK-GEEEVVVVDSL-VTGHRAAVHPAA-----KFYQGDLADREFMSMVFRENPDVDAVIHFAAYSLVAESMKKPLKYFDNNTAGMIKLLEVMSEFG-VKYIVFSSTAATYGIPDEIPI---KETTPQRPINPYGESKLMMETIMKWSDRAYGIKFV 166
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_PASHA (UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 48/163 (29.45%), Postives = 77/163 (47.24%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK-NLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 IL+TG AG+I SH L+ E IVVLD L S + + + KF +GDI D++ + I++++HFA V + N + KNN+ G+ VL+E + + + S+ VYG+ +V + TNPY +K E ++ Sbjct: 3 ILVTGGAGYIGSHTLVELLNENRE--IVVLDNLSNSSEVSLERVKQITGKSVKFYQGDILDRDILRKIFAENQIESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEE-MLKANVNTIVFSSSATVYGDPQIIPIVESCPVGG--TTNPYGTSKYMVERIL 160 The following BLAST results are available for this feature:
BLAST of FC876421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876421 ID=FC876421; Name=FC876421; organism=Citrus clementina; type=EST; length=706bpback to top |