FC876421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_NEIMC (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C GN=galE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 47/167 (28.14%), Postives = 82/167 (49.10%), Query Frame = 3 Query: 150 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 K IL+TG GFI SH L+++ +++V+LD L C++ N++P + F +GDI +++ + ID+++HFA V S ++ NN+ G+ VL E G + + + S+ VYG D V + T+PY +K+ E ++ Sbjct: 2 KKILVTGGTGFIGSHTVVSLLKS--GHQVVILDNL--CNSSINILPRLKTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAG-VFKIVFSSSATVYG--DPGKVPYTEDMQPGDTTSPYGTSKSMVERIL 161
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_NEIMB (UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B GN=galE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 48/167 (28.74%), Postives = 82/167 (49.10%), Query Frame = 3 Query: 150 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 K IL+TG GFI SH L+++ +++V+LD L C++ N++P + F +GDI +++ + ID+++HFA V S ++ NN+ G+ VL E G + + S+ VYG D V + T+PY A+K+ E ++ Sbjct: 2 KKILVTGGTGFIGSHTVVSLLKS--GHQVVILDNL--CNSSINILPRLKTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAG-VFSIVFSSSATVYG--DPGKVPYTEDMPPGDTTSPYGASKSMVERIL 161
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_HAEIN (UDP-glucose 4-epimerase OS=Haemophilus influenzae GN=galE PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 56/170 (32.94%), Postives = 81/170 (47.65%), Query Frame = 3 Query: 156 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNL--IPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE-----TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 IL+TG AG+I SH L+ E +VVLD L C S+ K+L + KF +GDI L+ + I++++HFA V S E+ NN+ GT VL++ K G + F+ S+ VYG+ ED VG TNPY +K E ++ Sbjct: 3 ILVTGGAGYIGSHTVVELLNVGKE--VVVLDNL--CNSSPKSLERVKQITGKEAKFYEGDILDRALLQKIFAENEINSVIHFAGLKAVGESVQKPTEYYMNNVAGTLVLIQEMKKAG-VWNFVFSSSATVYGDPKIIPITEDCEVGG-------TTNPYGTSKYMVEQIL 160
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE1_PEA (UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11 Identity = 46/162 (28.40%), Postives = 76/162 (46.91%), Query Frame = 3 Query: 150 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-----SNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 620 + IL+TG+AGFI +H +L+ N + + ++D D ++ ++ S S N +F GD+ + D + L D ++HFA V S N + NN+ GT L E ++ + S+ VYG+ ++ V E +L NPY TK Sbjct: 6 QKILVTGSAGFIGTHTVVQLLNN--GFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTLGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEV-MAKHNCKKMVFSSSATVYGQPEKIPCV---EDFKLQAMNPYGRTK 161
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11 Identity = 58/188 (30.85%), Postives = 83/188 (44.15%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKFV-KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIH-PWKTCYGP 704 ++L+TGAAGF+ +HV L R ++ LD + Y +LK + + FV +GDI A L+ L +MH AAQ V + N + +NI G LLE CK + S+ VYG + Q P + Y+ATK E + Y YGL + + T YGP Sbjct: 92 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGP 275
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 56/188 (29.79%), Postives = 82/188 (43.62%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKF-VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIH-PWKTCYGP 704 ++L+TGAAGF+ SH C+ +R + ++ D + Y +LK F V+GD+ L+ L I+H AAQ V + N + +NI G LLE K + S+ VYG E+ H Q P + Y+ATK E + Y YGL + + T YGP Sbjct: 113 SVLVTGAAGFVGSH-CSLALRKRGD-GVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTENPFSEEHRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGP 296
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GALE_DROME (Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=CG12030 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 50/172 (29.07%), Postives = 76/172 (44.19%), Query Frame = 3 Query: 147 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL--DYCSNLK-----NLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 641 P +L+TG AG+I SH ++ Y ++ +D L Y S K + + F + DI + V + ID + HFAA V S ++ NN+ GT+VLLEA + +F++ S+ VYGE V H T+PY TK E ++ Sbjct: 3 PPTVLVTGGAGYIGSHTVLEMLN--AGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFYRVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEA-MADNNVFKFVYSSSATVYGEPKFLPVTEEHPTGNC--TSPYGKTKYFTEEIL 169
BLAST of FC876421 vs. ExPASy Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 57/188 (30.32%), Postives = 83/188 (44.15%), Query Frame = 3 Query: 153 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKASSNFKF-VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIH-PWKTCYGP 704 ++L+TGAAGF+ +HV L R ++ LD + Y ++LK + + F V+GDI L+ L +MH AAQ V + N + +NI G LLE CK + S+ VYG + Q P + Y+ATK E + Y YGL + + T YGP Sbjct: 93 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGP 276 The following BLAST results are available for this feature:
BLAST of FC876421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876421 ID=FC876421; Name=FC876421; organism=Citrus clementina; type=EST; length=706bpback to top |