FC876424

Overview
NameFC876424
Unique NameFC876424
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10357 contig Ccv1_Contig10357:1..673. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KRP95_STRPU (Kinesin-II 95 kDa subunit OS=Strongylocentrotus purpuratus GN=KRP95 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.228e-32
Identity = 90/211 (42.65%), Postives = 126/211 (59.72%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-------GENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS-KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFK-YKQMAEKLKQ 611
            K+L++K+  + G   V  L+       +E+  ++  G   RSVGSTN NE SSRSH +  +T++       GEN I   K    L LVDLAGSER  K    G+RLKE+  IN SLSALG+VISAL   KS HIPYR+SKLT +LQ SLGG+ KT+M   + P+S +  ET  +L +A+R + I++ P   +     L + +++   +LKQ
Sbjct:  161 KRLDLKERPDTGVY-VKDLSSFVTKSVKEIEHVMTVGNNNRSVGSTNMNEHSSRSHAIFIITIECSELGVDGENHIRVGK----LNLVDLAGSERQAKTGATGDRLKEATKINLSLSALGNVISALVDGKSSHIPYRDSKLTRLLQDSLGGNAKTVMVANMGPASYNFDETITTLRYANRAKNIKNKPKINEDPKDALLREFQEEISRLKQ 366          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF3B_MOUSE (Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3b PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.228e-32
Identity = 87/188 (46.28%), Postives = 118/188 (62.77%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-------GENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS-KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP 545
            K+LE+K+  + G   V  L+       +E+  ++  G + RSVG+TN NE SSRSH +  +T++       GEN I   K    L LVDLAGSER  K    GERLKE+  IN SLSALG+VISAL   KS HIPYR+SKLT +LQ SLGG+ KT+M   + P+S ++ ET  +L +A+R + I++ P
Sbjct:  162 KRLELKERPDTGVY-VKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGK----LNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKP 344          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF3B_HUMAN (Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3B PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.228e-32
Identity = 87/188 (46.28%), Postives = 118/188 (62.77%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-------GENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS-KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP 545
            K+LE+K+  + G   V  L+       +E+  ++  G + RSVG+TN NE SSRSH +  +T++       GEN I   K    L LVDLAGSER  K    GERLKE+  IN SLSALG+VISAL   KS HIPYR+SKLT +LQ SLGG+ KT+M   + P+S ++ ET  +L +A+R + I++ P
Sbjct:  162 KRLELKERPDTGVY-VKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGK----LNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKP 344          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF27_RAT (Kinesin-like protein KIF27 OS=Rattus norvegicus GN=Kif27 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32
Identity = 95/235 (40.43%), Postives = 128/235 (54.47%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTV-----KGENLINGQKTK-----SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS---KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLKQDEKETKKLQDNLQSVQLRLA 671
            K L I++  +G T  V G  E QV   E+V  LL+ G   R  G+T  NE SSRSH +  ++V       E   +G+        S    VDLAGSERV K    GER KES  IN  L ALG+VISAL     KS H+PYR++K+T +L+ SLGG  KT+M   +SPSSSD  E+  SL +A+R R I + P            +   A+++ + E E K L++ LQS Q  ++
Sbjct:  154 KDLHIREDEKGNTVIV-GAKECQVDSVEDVMGLLQVGNAARHTGTTQMNEHSSRSHAIFTISVCQVGKSAEATEDGEWCSHRHIVSKFHFVDLAGSERVTKTGNTGERFKESIQINSGLLALGNVISALGDPRRKSSHVPYRDAKITRLLKDSLGGSAKTVMITCVSPSSSDFDESLNSLKYANRARNIRNKPT---------LNFSPQADRMDEMEFEIKLLREALQSHQASIS 378          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KINH_STRPU (Kinesin heavy chain OS=Strongylocentrotus purpuratus PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.094e-32
Identity = 83/196 (42.35%), Postives = 116/196 (59.18%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLKQDEKETKKL 635
            V G TE      EEV ++++ G   R +  TN NE SSRSH +  + VK EN+   +K    L+LVDLAGSE+V K   +G  L E++ INKSLSALG+VISALA  K  HIPYR+SK+T ILQ SLGG+ +T + +  SPSS +  E+  +L F  R + I++         +E ++ +   EK K    + + L
Sbjct:  164 VKGATERFASSPEEVMDVIEEGKSNRHIAVTNMNEHSSRSHSIFLIQVKQENMETKKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGKKSHIPYRDSKMTRILQESLGGNARTTIVICCSPSSFNESESKSTLMFGQRAKTIKNTVTVNMELTAEEWRNRYEKEKEKNGRLKAQLL 359          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF7_HUMAN (Kinesin-like protein KIF7 OS=Homo sapiens GN=KIF7 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32
Identity = 86/180 (47.78%), Postives = 107/180 (59.44%), Query Frame = 3
Query:   33 EGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLIN--------GQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS---KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIES 539
            E G   + G+ E  V G +EV  LL+ G   R  G+T+ N LSSRSH +  VT++              GQ   S    VDLAGSERV K    GERLKES  IN SL ALG+VISAL     +  HIPYR+SK+T IL+ SLGG+ KT+M   +SPSSSD  ET  +LN+ASR + I +
Sbjct:  172 ERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNYASRAQNIRN 351          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF3_DICDI (Kinesin-related protein 3 OS=Dictyostelium discoideum GN=kif3 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32
Identity = 77/204 (37.75%), Postives = 123/204 (60.29%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLKQDEKETKKLQDNLQSVQ 659
            V G +E  +Y  E++ +++ +G   R++  T  N  SSRSH +  +T++ +NL  G      L+LVDLAGSE++ K    G  L E++ INKSLS+LG+VI+AL   KS HIPYR+SKLT +LQ SLGG+ +T + +  SPSS +  ET  +L F SR + I     + ++ I++     ++   L + E E + L+  ++ ++
Sbjct:  168 VEGTSEVYIYREEDILDVINTGISNRAIAETRMNAESSRSHSIFILTIQQKNLKVGSIKTGKLYLVDLAGSEKISKTGAQGTTLDEAKMINKSLSSLGNVINALTDGKSTHIPYRDSKLTRVLQESLGGNSRTTLIINCSPSSYNEAETISTLRFGSRAKNI-----KNKAKINQERSAAELKILLSKAENEIENLKGYIKELE 366          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: OSM3_CAEEL (Osmotic avoidance abnormal protein 3 OS=Caenorhabditis elegans GN=osm-3 PE=2 SV=4)

HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31
Identity = 90/203 (44.33%), Postives = 120/203 (59.11%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS-KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFK-YKQMAEKLK 608
            +KLEIK+  + G   V GL+    +      EL+  G   R VG+T  N+ SSRSH +  V V+G     G      L LVDLAGSER  K    G+RLKE+  IN SLSALG+VISAL   KS HIPYR+SKLT +LQ SLGG+ KT+M   +SPSS +  ET  +L +A+R + I++ P   +     L + Y++   +LK
Sbjct:  153 QKLEIKEQPDRGVY-VAGLSMHVCHDVPACKELMTRGFNNRHVGATLMNKDSSRSHSIFTVYVEGMTE-TGSIRMGKLNLVDLAGSERQSKTGATGDRLKEATKINLSLSALGNVISALVDGKSKHIPYRDSKLTRLLQDSLGGNTKTIMIACVSPSSDNYDETLSTLRYANRAKNIKNKPTINEDPKDALLREYQEEIARLK 353          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF3A_PONAB (Kinesin-like protein KIF3A OS=Pongo abelii GN=KIF3A PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31
Identity = 88/216 (40.74%), Postives = 133/216 (61.57%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS-KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISE--LFKYKQMAEKLKQDEKETKKL 635
            ++LE+K+  + G   +  L+   V   +++  ++  G + RSVG+TN NE SSRSH +  +T++  E  I+G        L LVDLAGSER  K    G+RLKE+  IN SLS LG+VISAL   KS H+PYRNSKLT +LQ SLGG+ KT+M   I P+  +  ET  +L +A+R + I++  AR   D  +  L ++++  E+LK+  +E +++
Sbjct:  167 QRLEVKERPDVGVY-IKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKN-KARINEDPKDALLRQFQKEIEELKKKLEEGEEI 380          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF3A_MACFA (Kinesin-like protein KIF3A OS=Macaca fascicularis GN=KIF3A PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31
Identity = 88/216 (40.74%), Postives = 133/216 (61.57%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS-KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISE--LFKYKQMAEKLKQDEKETKKL 635
            ++LE+K+  + G   +  L+   V   +++  ++  G + RSVG+TN NE SSRSH +  +T++  E  I+G        L LVDLAGSER  K    G+RLKE+  IN SLS LG+VISAL   KS H+PYRNSKLT +LQ SLGG+ KT+M   I P+  +  ET  +L +A+R + I++  AR   D  +  L ++++  E+LK+  +E +++
Sbjct:  167 QRLEVKERPDVGVY-IKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKN-KARINEDPKDALLRQFQKEIEELKKKLEEGEEI 380          
The following BLAST results are available for this feature:
BLAST of FC876424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
KRP95_STRPU1.228e-3242.65Kinesin-II 95 kDa subunit OS=Strongylocentrotus pu... [more]
KIF3B_MOUSE1.228e-3246.28Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3... [more]
KIF3B_HUMAN1.228e-3246.28Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3... [more]
KIF27_RAT1.603e-3240.43Kinesin-like protein KIF27 OS=Rattus norvegicus GN... [more]
KINH_STRPU2.094e-3242.35Kinesin heavy chain OS=Strongylocentrotus purpurat... [more]
KIF7_HUMAN4.665e-3247.78Kinesin-like protein KIF7 OS=Homo sapiens GN=KIF7 ... [more]
KIF3_DICDI7.957e-3237.75Kinesin-related protein 3 OS=Dictyostelium discoid... [more]
OSM3_CAEEL1.357e-3144.33Osmotic avoidance abnormal protein 3 OS=Caenorhabd... [more]
KIF3A_PONAB1.357e-3140.74Kinesin-like protein KIF3A OS=Pongo abelii GN=KIF3... [more]
KIF3A_MACFA1.357e-3140.74Kinesin-like protein KIF3A OS=Macaca fascicularis ... [more]

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Properties
Property NameValue
Genbank descriptionC32004F03EF DevOvary1 Citrus clementina cDNA clone C32004F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876424 ID=FC876424; Name=FC876424; organism=Citrus clementina; type=EST; length=673bp
CTCCTAAGAAGTTGGAGATAAAGCAAGCAGCAGAAGGTGGTACCCAAGAA
GTGCCAGGACTCACTGAAGCTCAAGTATATGGTACAGAGGAAGTGTGGGA
GCTACTTAAGTCTGGAGCCAGAGTTAGATCTGTTGGATCCACCAATGCCA
ATGAGCTCAGTAGCCGGTCTCACTGCTTGTTGCGAGTAACTGTGAAGGGG
GAGAATCTGATAAATGGGCAGAAGACTAAGAGTCACCTCTGGCTGGTAGA
CTTGGCAGGCAGTGAACGTGTGGGGAAGATTGAAGTTGATGGTGAGAGGT
TGAAGGAATCTCAGTTTATAAATAAATCTCTCTCTGCACTTGGTGATGTT
ATATCTGCTCTGGCATCTAAATCAGGCCACATTCCGTACAGGAACTCGAA
GCTCACTCATATTTTGCAGAGCTCTCTAGGTGGAGATTGCAAGACTCTGA
TGTTTGTCCAGATCAGCCCAAGTTCTTCAGACCTTGGAGAGACCCCTTGT
TCACTGAATTTTGCCAGCCGAGTTCGGGGAATTGAAAGTGGTCCTGCTCG
GAAACAATCAGACATTTCTGAACTTTTTAAGTACAAGCAAATGGCAGAAA
AGTTAAAGCAGGATGAGAAGGAGACGAAGAAGTTGCAGGACAATTTGCAG
TCTGTACAATTAAGGCTCGCTGC
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