FC876424

Overview
NameFC876424
Unique NameFC876424
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10357 contig Ccv1_Contig10357:1..673. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF11_MOUSE (Kinesin-like protein KIF11 OS=Mus musculus GN=Kif11 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 79/193 (40.93%), Postives = 118/193 (61.14%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQKTKS--HLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPA--RKQSDISELFKYKQMAEKLKQD 614
            + GL E  V+  +EV+++L+ GA  R+  +T  N  SSRSH +  VT+   E  I+G++      L LVDLAGSE +G+     +R +E+  IN+SL  LG VI+AL  ++ HIPYR SKLT ILQ SLGG  +T +   ISP+S +L ET  +L +A R + I + P   +K +  + + +Y +  E+LK+D
Sbjct:  195 IKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHIPYRESKLTRILQDSLGGRTRTSIIATISPASFNLEETLSTLEYAHRAKNIMNKPEVNQKLTKKALIKEYTEEIERLKRD 387          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: EG51_XENLA (Kinesin-related motor protein Eg5 1 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 78/193 (40.41%), Postives = 118/193 (61.14%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQKTKS--HLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPA--RKQSDISELFKYKQMAEKLKQD 614
            + GL E  V+  +EV+ +L+ GA  R   ST  N  SSRSH +  VT+   E  ++G++      L LVDLAGSE +G+     +R +E+  IN+SL  LG VI+AL  ++ HIPYR SKLT ILQ SLGG  KT +   +SP+S +L ET  +L++A+R + I + P   +K +  + + +Y +  E+LK++
Sbjct:  189 IKGLEEISVHNKDEVYHILERGAARRKTASTLMNAYSSRSHSVFSVTIHMKETTVDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHIPYRESKLTRILQDSLGGRTKTSIIATVSPASINLEETVSTLDYANRAKSIMNKPEVNQKLTKKALIKEYTEEIERLKRE 381          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIFC1_CRIGR (Kinesin-like protein KIFC1 OS=Cricetulus griseus PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.696e-29
Identity = 84/184 (45.65%), Postives = 110/184 (59.78%), Query Frame = 3
Query:   15 EIKQAAEGGTQ-EVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSHLWLVDLAGSERV--GKIEVDGER--LKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPAR 551
            EI++A  G  +  V       V    EV  LL    + R+V  T  NE SSRSH + ++ + GE+   G +  + L LVDLAGSER+  G     GER  L+E+Q IN SLS LG VI AL++K  H+PYRNSKLT++LQ+SLGG  K LMFV ISP   ++ E+  SL FAS+V     G A+
Sbjct:  435 EIRRARPGSEELTVTNARYVPVSCEREVEALLHLAHQNRAVARTAQNERSSRSHSVFQLQISGEHAARGLQCVAPLNLVDLAGSERLDPGLTLGPGERDRLRETQSINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIGTAQ 618          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF11_HUMAN (Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF11 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.696e-29
Identity = 78/193 (40.41%), Postives = 118/193 (61.14%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQKTKS--HLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPA--RKQSDISELFKYKQMAEKLKQD 614
            + GL E  V+  +EV+++L+ GA  R+  +T  N  SSRSH +  VT+   E  I+G++      L LVDLAGSE +G+     +R +E+  IN+SL  LG VI+AL  ++ H+PYR SKLT ILQ SLGG  +T +   ISP+S +L ET  +L +A R + I + P   +K +  + + +Y +  E+LK+D
Sbjct:  196 IKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQKLTKKALIKEYTEEIERLKRD 388          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KLP5_SCHPO (Kinesin-like protein 5 OS=Schizosaccharomyces pombe GN=klp5 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.827e-29
Identity = 78/209 (37.32%), Postives = 120/209 (57.42%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENL---INGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS--KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLKQDEKETKKLQDNLQSVQL 662
            VPGLT       EE+ +++  G   R++  T AN  SSRSH +L+VT+  +     IN   T + L ++DLAGSER    ++ G RL E   INKSL ALG+ I+AL    +  H+PYR+SKLT +L+ SLGG+C+T+M V +SPSS    ET  +L +A+R + I++   R    +       Q  + + +  ++  +L++ L  + L
Sbjct:  225 VPGLTSLSPESLEEIIDIIMKGNANRTMSPTEANAASSRSHAVLQVTLIQKPRTAGINEDHTLATLSIIDLAGSERATATKLRGSRLFEGANINKSLLALGNCINALCDPHRRAHVPYRDSKLTRLLKFSLGGNCRTVMIVCVSPSSVHYEETHNTLKYANRAKNIKTEVLRNMISVDR--HVSQYVKAIVELREQISELENRLAQIDL 431          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF4_CHICK (Chromosome-associated kinesin KIF4 OS=Gallus gallus GN=KIF4 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.304e-29
Identity = 80/193 (41.45%), Postives = 111/193 (57.51%), Query Frame = 3
Query:   48 EVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSH--LWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS---KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGP-ARKQSDISELFKYKQMAEKLK 608
            ++ GLTE  V    +    L+ G   R+V ST  N  SSRSH +  + +  +   N + +  H  L LVDLAGSER  K + +G+RLKE   IN+ L  LG+VISAL     K G +PYR+SKLT +LQ SLGG+  TLM   +SP+ S+L ET  +L +A R R I++ P        +EL   KQ  ++L+
Sbjct:  173 KIVGLTERNVASARDTVSCLEQGNNCRTVASTAMNSQSSRSHAIFTICIDQKKK-NDKNSSFHSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGEENKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIKNKPIVNVDPQAAELNHLKQQVQQLQ 364          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF10_DICDI (Kinesin-related protein 10 OS=Dictyostelium discoideum GN=kif10 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.304e-29
Identity = 83/197 (42.13%), Postives = 111/197 (56.35%), Query Frame = 3
Query:   87 EEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTK-SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISAL------------ASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLKQDEKETKKLQ 638
            ++V++LLK G   R    T  N+ SSRSH +L++TVK +NL +  K     L L+DLAGSER  K    G+RLKE   INKSL ALG+ I AL            +S    IPYR+SKLT IL+ SL G CKT+M   ISP+SS   ET  +L +A R + I++    K    S      Q  E +K+  +E K+L+
Sbjct:  213 DQVFKLLKYGNLNRKQSPTQTNQTSSRSHAVLQITVKQQNLQDKSKISFGKLSLIDLAGSERASKTLNTGDRLKEGTSINKSLLALGNCIKALGELCKNQQSQQQSSNPNFIPYRDSKLTRILKDSLTGSCKTIMIANISPNSSSFEETHNTLKYAQRAKSIKT-QITKNVFASSTNLITQYNEIIKEQREEIKQLK 408          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIFC1_MOUSE (Kinesin-like protein KIFC1 OS=Mus musculus GN=Kifc1 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 8.234e-29
Identity = 83/186 (44.62%), Postives = 112/186 (60.22%), Query Frame = 3
Query:   15 EIKQAAEGGTQ-EVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSHLWLVDLAGSERV------GKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPAR 551
            EI++A+ G  +  V       V   +EV  LL    + R+V  T  N+ SSRSH + ++ + GE+   G +  + L LVDLAGSER+      G  E D  RL+E+Q IN SLS LG VI AL++K  H+PYRNSKLT++LQ+SLGG  K LMFV ISP   ++ E+  SL FAS+V     G A+
Sbjct:  487 EIRRASPGSEELTVTNARYVPVSCEKEVEALLHLAHQNRAVAHTAQNKRSSRSHSVFQLQISGEHAARGLQCGAPLNLVDLAGSERLDPGLHLGPGERD--RLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIGTAQ 670          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIF4_DICDI (Kinesin-related protein 4 OS=Dictyostelium discoideum GN=kif4 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.234e-29
Identity = 85/219 (38.81%), Postives = 121/219 (55.25%), Query Frame = 3
Query:    6 KKLEIKQAAEGGTQEVPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASK--SGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISELFKYKQMAE---KLKQDEKETKKLQDNL 647
            KKL+I +    G   V  L E  V   ++++ L+  G   R +GST  N+ SSRSH + R+ ++     NG    S L LVDLAGSERV     +G RLKE   INKSL  L  VIS L+ +    H+PYR+SKLT ILQ SLGG+ KT +   I+P+++   E+  +L FA R + +++            +K  Q+A+    LK+ E E  +LQ+ L
Sbjct:  167 KKLKIHEDIYKGVV-VANLKEEIVISPDQIFALMNFGEERRHIGSTMMNDSSSRSHTIFRMQIQSTCKQNGTIQMSTLTLVDLAGSERVSSTGAEGVRLKEGTHINKSLMTLSKVISKLSEEKTQQHVPYRDSKLTRILQPSLGGNSKTAILCTITPATTHQEESISTLQFAKRAKRVKTN-----------YKINQVADANTMLKKYESEILELQNQL 373          
BLAST of FC876424 vs. ExPASy Swiss-Prot
Match: KIP1_ASHGO (Kinesin-like protein KIP1 OS=Ashbya gossypii GN=KIP1 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.075e-28
Identity = 76/194 (39.18%), Postives = 112/194 (57.73%), Query Frame = 3
Query:   51 VPGLTEAQVYGTEEVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENL--INGQK--TKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETPCSLNFASRVRGIESGPARKQSDISE--LFKYKQMAEKLKQD 614
            V G+ E  +   +E  +LL  G+  R V +T  N+LSSRSH +  +T     +  I+G++      L LVDLAGSE + +   + +R +E+  INKSL  LG VI+AL   S HIPYR SKLT +LQ SLGG  KT +   ISP+   + ET  +L +A+R + I++ P   Q    E  + +Y Q  E+L+++
Sbjct:  253 VKGMEEMYIRSAQEGLKLLMDGSLKRKVAATKCNDLSSRSHTIFTITTNVTKIHPISGEQYVKVGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSQHIPYRESKLTRLLQDSLGGKTKTCIIATISPAKISMEETVSTLEYATRAKSIKNTPQVNQLMAKESCIIEYIQEIERLRKE 446          
The following BLAST results are available for this feature:
BLAST of FC876424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
KIF11_MOUSE2.167e-2940.93Kinesin-like protein KIF11 OS=Mus musculus GN=Kif1... [more]
EG51_XENLA2.167e-2940.41Kinesin-related motor protein Eg5 1 OS=Xenopus lae... [more]
KIFC1_CRIGR3.696e-2945.65Kinesin-like protein KIFC1 OS=Cricetulus griseus P... [more]
KIF11_HUMAN3.696e-2940.41Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF1... [more]
KLP5_SCHPO4.827e-2937.32Kinesin-like protein 5 OS=Schizosaccharomyces pomb... [more]
KIF4_CHICK6.304e-2941.45Chromosome-associated kinesin KIF4 OS=Gallus gallu... [more]
KIF10_DICDI6.304e-2942.13Kinesin-related protein 10 OS=Dictyostelium discoi... [more]
KIFC1_MOUSE8.234e-2944.62Kinesin-like protein KIFC1 OS=Mus musculus GN=Kifc... [more]
KIF4_DICDI8.234e-2938.81Kinesin-related protein 4 OS=Dictyostelium discoid... [more]
KIP1_ASHGO1.075e-2839.18Kinesin-like protein KIP1 OS=Ashbya gossypii GN=KI... [more]

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Properties
Property NameValue
Genbank descriptionC32004F03EF DevOvary1 Citrus clementina cDNA clone C32004F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876424 ID=FC876424; Name=FC876424; organism=Citrus clementina; type=EST; length=673bp
CTCCTAAGAAGTTGGAGATAAAGCAAGCAGCAGAAGGTGGTACCCAAGAA
GTGCCAGGACTCACTGAAGCTCAAGTATATGGTACAGAGGAAGTGTGGGA
GCTACTTAAGTCTGGAGCCAGAGTTAGATCTGTTGGATCCACCAATGCCA
ATGAGCTCAGTAGCCGGTCTCACTGCTTGTTGCGAGTAACTGTGAAGGGG
GAGAATCTGATAAATGGGCAGAAGACTAAGAGTCACCTCTGGCTGGTAGA
CTTGGCAGGCAGTGAACGTGTGGGGAAGATTGAAGTTGATGGTGAGAGGT
TGAAGGAATCTCAGTTTATAAATAAATCTCTCTCTGCACTTGGTGATGTT
ATATCTGCTCTGGCATCTAAATCAGGCCACATTCCGTACAGGAACTCGAA
GCTCACTCATATTTTGCAGAGCTCTCTAGGTGGAGATTGCAAGACTCTGA
TGTTTGTCCAGATCAGCCCAAGTTCTTCAGACCTTGGAGAGACCCCTTGT
TCACTGAATTTTGCCAGCCGAGTTCGGGGAATTGAAAGTGGTCCTGCTCG
GAAACAATCAGACATTTCTGAACTTTTTAAGTACAAGCAAATGGCAGAAA
AGTTAAAGCAGGATGAGAAGGAGACGAAGAAGTTGCAGGACAATTTGCAG
TCTGTACAATTAAGGCTCGCTGC
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