FC876427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: SDCS_STAS1 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sdcS PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24 Identity = 72/223 (32.29%), Postives = 120/223 (53.81%), Query Frame = 3 Query: 27 LLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNLPEVPLQST---LVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMXTLLFIIPSM-KQKGEKLMDWNNAE 683 +LLG T F+SM++ N AA +IM+P+ I++ E+ T + K+ +A+VL + Y+ +GG+ TL GT +IL G +++ F E ISF+ W G P +V+ +W I + + L D ++++L LG M + EK+VL VF + LW+TR + W F DGT ++ + LLF+IP+ K+K ++++DW A+ Sbjct: 147 ILLGFMIATGFLSMFVSNTAAVMIMIPIGLAIIKEANELKHGDTKPESISKFEQALVLAIGYAGTIGGLGTLIGTPPLIILKGQYQSAFGE--EISFAKWMIIGVPTVIVLLFLVW-IYIRYIAFKHDMKTLPGGQDL--IRKKLSELGKMKYEEKVVLIVFLLASFLWITREFL--LKHW--TFTSEVADGTIAMFISVLLFLIPAKNKEKHKRIIDWEVAK 360
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: SDCS_STAAR (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MRSA252) GN=sdcS PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24 Identity = 72/225 (32.00%), Postives = 119/225 (52.89%), Query Frame = 3 Query: 27 LLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYL--DKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMXTLLFIIPSMK-QKGEKLMDWNNAE 683 +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL GT +IL G + +F + ISF+ W G P +V+ W L + R +YL + +K++LD LG M + EK+V +F + LW+TR + W DGT ++ + LLFIIP+ +K +++DW A+ Sbjct: 148 ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHF--GHEISFAKWMIVGIPTVIVLLGITWLYL-RYVAFRHD----LKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAK 361
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: SDCS_STAAN (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain N315) GN=sdcS PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24 Identity = 72/225 (32.00%), Postives = 119/225 (52.89%), Query Frame = 3 Query: 27 LLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYL--DKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMXTLLFIIPSMK-QKGEKLMDWNNAE 683 +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL GT +IL G + +F + ISF+ W G P +V+ W L + R +YL + +K++LD LG M + EK+V +F + LW+TR + W DGT ++ + LLFIIP+ +K +++DW A+ Sbjct: 148 ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHF--GHEISFAKWMIVGIPTVIVLLGITWLYL-RYVAFRHD----LKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAK 361
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: SDCS_STAAM (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sdcS PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24 Identity = 72/225 (32.00%), Postives = 119/225 (52.89%), Query Frame = 3 Query: 27 LLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYL--DKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMXTLLFIIPSMK-QKGEKLMDWNNAE 683 +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL GT +IL G + +F + ISF+ W G P +V+ W L + R +YL + +K++LD LG M + EK+V +F + LW+TR + W DGT ++ + LLFIIP+ +K +++DW A+ Sbjct: 148 ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHF--GHEISFAKWMIVGIPTVIVLLGITWLYL-RYVAFRHD----LKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAK 361
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: SDCS_STAAC (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain COL) GN=sdcS PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24 Identity = 72/225 (32.00%), Postives = 119/225 (52.89%), Query Frame = 3 Query: 27 LLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYL--DKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMXTLLFIIPSMK-QKGEKLMDWNNAE 683 +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL GT +IL G + +F + ISF+ W G P +V+ W L + R +YL + +K++LD LG M + EK+V +F + LW+TR + W DGT ++ + LLFIIP+ +K +++DW A+ Sbjct: 148 ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHF--GHEISFAKWMIVGIPTVIVLLGITWLYL-RYVAFRHD----LKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAK 361
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: SDCS_STAA8 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain NCTC 8325) GN=sdcS PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24 Identity = 72/225 (32.00%), Postives = 119/225 (52.89%), Query Frame = 3 Query: 27 LLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYL--DKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMXTLLFIIPSMK-QKGEKLMDWNNAE 683 +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL GT +IL G + +F + ISF+ W G P +V+ W L + R +YL + +K++LD LG M + EK+V +F + LW+TR + W DGT ++ + LLFIIP+ +K +++DW A+ Sbjct: 148 ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHF--GHEISFAKWMIVGIPTVIVLLGITWLYL-RYVAFRHD----LKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAK 361
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: SDCS_STAAW (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MW2) GN=sdcS PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24 Identity = 71/225 (31.56%), Postives = 119/225 (52.89%), Query Frame = 3 Query: 27 LLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYL--DKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMXTLLFIIPSMK-QKGEKLMDWNNAE 683 +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL GT +IL G + +F + ISF+ W G P +V+ W L + R +YL + +K++LD LG M + EK+V +F + LW+TR + W DGT ++ + LLF+IP+ +K +++DW A+ Sbjct: 148 ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHF--GHEISFAKWMIVGIPTVIVLLGITWLYL-RYVAFRHD----LKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAK 361
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: SDCS_STAAS (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MSSA476) GN=sdcS PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24 Identity = 71/225 (31.56%), Postives = 119/225 (52.89%), Query Frame = 3 Query: 27 LLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYL--DKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMXTLLFIIPSMK-QKGEKLMDWNNAE 683 +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL GT +IL G + +F + ISF+ W G P +V+ W L + R +YL + +K++LD LG M + EK+V +F + LW+TR + W DGT ++ + LLF+IP+ +K +++DW A+ Sbjct: 148 ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHF--GHEISFAKWMIVGIPTVIVLLGITWLYL-RYVAFRHD----LKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAK 361
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: SDCS_STAAB (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sdcS PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24 Identity = 71/225 (31.56%), Postives = 119/225 (52.89%), Query Frame = 3 Query: 27 LLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYL--DKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMXTLLFIIPSMK-QKGEKLMDWNNAE 683 +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL GT +IL G + +F + ISF+ W G P +V+ W L + R +YL + +K++LD LG M + EK+V +F + LW+TR + W DGT ++ + LLF+IP+ +K +++DW A+ Sbjct: 148 ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHF--GHEISFAKWMIVGIPTVIVLLGITWLYL-RYVAFRHD----LKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAK 361
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: SDCS_STAA3 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain USA300) GN=sdcS PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23 Identity = 72/225 (32.00%), Postives = 118/225 (52.44%), Query Frame = 3 Query: 27 LLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYL--DKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMXTLLFIIPSMK-QKGEKLMDWNNAE 683 +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL GT +IL G + +F ISF+ W G P +V+ W L + R +YL + +K++LD LG M + EK+V +F + LW+TR + W DGT ++ + LLFIIP+ +K +++DW A+ Sbjct: 148 ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHF--GYEISFAKWMIVGIPTVIVLLGITWLYL-RYVAFRHD----LKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAK 361 The following BLAST results are available for this feature:
BLAST of FC876427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876427 ID=FC876427; Name=FC876427; organism=Citrus clementina; type=EST; length=721bpback to top |