FC876427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: NAD1_CAEEL (Sodium-dependent low-affinity dicarboxylate transporter 1 OS=Caenorhabditis elegans GN=nac-1 PE=2 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 70/272 (25.74%), Postives = 116/272 (42.65%), Query Frame = 3 Query: 18 PPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNLPEVPLQSTLV------------------------------------------RKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANP-ISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMXTLLFIIP----------SMKQKGEKLMDW 671 P ++ G G T F+SMW+ N A +M+P+ ++ L LV +K K ++L V +SA +GG +T+TGT NL+LVG FP A+ ++F +W F FP+ + W +L L Y ++ + L+++ + L +FAE V+ F +L+ LW+ R +PGWG +F D D T+++ + LLF +P ++ L+DW Sbjct: 127 PARVMAGFMGVTGFLSMWISNTATTALMVPILQSVITELVSNHRMEDLVALCEAHHNSSRKHSVGMRRLSLPNENNEIKREEMDTAMSPREQKMAKGLMLSVCFSANIGGAATITGTASNLVLVGQLNELFPGADTGVNFLSWLIFAFPMVFCCLIYCWCVLYLLYLRDAPKGSI---IVTRKLQQKYNELHAFSFAEMAVIFCFALLLVLWILRE-PQVVPGWGEMFKDEFVSDATSAMFIVILLFTLPEKLPSSRGSSEQRKASSGLLDW 394
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: NAD3_CAEEL (Sodium-dependent high-affinity dicarboxylate transporter 3 OS=Caenorhabditis elegans GN=nac-3 PE=2 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 7.640e-23 Identity = 73/247 (29.55%), Postives = 121/247 (48.99%), Query Frame = 3 Query: 18 PPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL----PEVPLQSTLVRKYCK----AVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEAN-PISFSTWFCFGFPLALVIFVALWAILCLFYCSRGSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRA-GDGTASVVMXTLLFIIPS-------------MKQKGEKLMDWNNAEAT 689 P ++LG TA +S ++ N A +M+P+ ++Q L P R CK +VL + ++A +GG T TGT NL+++G FP+ + +++ TW F +PL L+ W L F+ P E + + LK + L M +AEK V F +L++LW+ R+ +PG+G F A D T+++++ LLF++PS +K++G LMDW + T Sbjct: 160 PKWIMLGFMTVTALLSSFISNTATTAMMVPIGQSVVQQLISSFQHHPTNGERGRLGCKKMATGLVLSICFAANIGGTGTATGTPSNLVMLGQLSALFPKVDGSLNYVTWIFFAYPLMLLCLFVAWMTLVSFFLR--DAPEKDEAVTEM-LKTRYNELPRMTYAEKSVFVCFCILLSLWVFRN-PGVVPGFGVFFKKGAYTDATSAMIVAFLLFVLPSERPDLATYIKKEDLKKRG-CLMDWKTMQET 401
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A5_MOUSE (Solute carrier family 13 member 5 OS=Mus musculus GN=Slc13a5 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.702e-22 Identity = 76/261 (29.12%), Postives = 118/261 (45.21%), Query Frame = 3 Query: 18 PPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL----------------------PEVPLQSTL-------------VRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPI-SFSTWFCFGFPLALVIFVALWAILCLFYCSR---------GSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALF-----NDRAGDGTASVVMXTLLFIIPSMKQK 650 P L+LG TAF+SMW+ N AA +M+P+ +LQ + E+P + + KA+ L V YSA++GG +TLTGTG N++L+G + FP++ + ++++WF F FP +++ V W L Y G +E + L E LG +++ E VL F +L+ LW +R +PGW + D T ++ + LLFIIPS K K Sbjct: 121 PSRLMLGFMFVTAFLSMWISNTAATAMMIPIVEAMLQQMIAANTAVEASLGTLELLDKNKTSELPGSQVVFEDPNVQEQEDEETKNMYKAMHLCVCYSASIGGTATLTGTGPNVVLLGQMQELFPDSKDVLNYASWFGFAFPNMVMMLVLAWLWLQCLYMRHNLKKTCICCGEKKRDTEKIAYKVLNEEYQKLGSLSYPECNVLFCFTLLVILWFSRD-PGFMPGWLSFAWVEGNTVHITDATVAIFVAILLFIIPSQKPK 380
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A1_MOUSE (Solute carrier family 13 member 1 OS=Mus musculus GN=Slc13a1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 56/167 (33.53%), Postives = 88/167 (52.69%), Query Frame = 3 Query: 174 CKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFYC-------SRGSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMXTLLFIIPSMK 644 CK + L V YS+ +GG++T+TGT NLI + T +P+ ++F +WF F FP+AL++ + W L Y G L E +K+E + LGPM + E + L +F ++ LW +R + GW LF++ G D T ++V L F+IP+ K Sbjct: 237 CKLMCLSVAYSSTIGGLTTITGTSTNLIFSEHFNTRYPDCRCLNFGSWFLFSFPVALILLLLSWIWLQWLYLGFDFKMFKCGKTKTLKEKACAKVIKQEYEKLGPMRYQEIVTLVIFIVMALLWFSRD-PGFVTGWSVLFSEYPGYVTDSTVALVAGILFFLIPAKK 402
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A4_HUMAN (Solute carrier family 13 member 4 OS=Homo sapiens GN=SLC13A4 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 65/208 (31.25%), Postives = 103/208 (49.52%), Query Frame = 3 Query: 126 QNLPEVPLQSTLVRKY--------CKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILCLFY--CSRGSGPALS-------EYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRA--GDGTASVVMXTLLFIIPSMKQKGEKLMDWNNAEATL 692 Q L P + L RKY CK + L + YSA +GG++T+ GT +LI + + +P A ++F TWF F FP++L++ V W + + C+ +LS E L + ++ E + LG +++ E + F ++ LW TR +PGW + F + D T SV + LLF+IP+ K K D N E +L Sbjct: 241 QVLTPSPRKQKLNRKYRSHHDQMICKCLSLSISYSATIGGLTTIIGTSTSLIFLEHFNNQYPAAEVVNFGTWFLFSFPISLIMLVVSWFWMHWLFLGCNFKETCSLSKKKKTKREQLSEKRIQEEYEKLGDISYPEMVTGFFFILMTVLWFTRE-PGFVPGWDSFFEKKGYRTDATVSVFLGFLLFLIPAKKPCFGKKNDGENQEHSL 447
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A1_RAT (Solute carrier family 13 member 1 OS=Rattus norvegicus GN=Slc13a1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.151e-21 Identity = 55/170 (32.35%), Postives = 90/170 (52.94%), Query Frame = 3 Query: 174 CKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILC----------LFYCSRGSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMXTLLFIIPSMK 644 CK + L + YS+ +GG++T+TGT NLI + T +P+ ++F +WF F FP+A+++ + W L +F C G L E +K+E + LGPM + E + L +F ++ LW +R + GW LF++ G D T ++V L F+IP+ K Sbjct: 237 CKLMCLCIAYSSTIGGLTTITGTSTNLIFSEHFNTRYPDCRCLNFGSWFLFSFPVAVILLLLSWIWLQWLFLGFNFKEMFKC--GKTKTLKEKACAEVIKQEYEKLGPMRYQEIVTLVIFIVMALLWFSRD-PGFVTGWSVLFSEYPGYVTDSTVALVAGILFFLIPAKK 403
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: S13A1_HUMAN (Solute carrier family 13 member 1 OS=Homo sapiens GN=SLC13A1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20 Identity = 76/287 (26.48%), Postives = 121/287 (42.16%), Query Frame = 3 Query: 12 MNPPLLLLGICGTTAFVSMWMHN---------VAAAVIMM-------------------------------------------PVA-----TGILQNLPEVPLQSTLVRKYC--------KAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEANPISFSTWFCFGFPLALVIFVALWAILC----------LFYCSRGSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMXTLLFIIPS 638 +NP L LG +TAF+SMW+ N +A AV+ PV TG + + E+ S + KY K L + YS+ +GG++T+TGT NLI + T +P+ ++F +WF F FP AL+I + W L +F C G + + +K+E LGP+ + E + L +F ++ LW +R +PGW ALF++ G D T ++++ L F+IP+ Sbjct: 118 VNPAWLTLGFMSSTAFLSMWLSNTSTAAMVMPIAEAVVQQIINAEAEVEATQMTYFNGSTNHGLEIDESVNGHEINERKEKTKPVPGYNNDTGKISSKVELEKNSGMRTKYRTKKGHVTRKLTCLCIAYSSTIGGLTTITGTSTNLIFAEYFNTRYPDCRCLNFGSWFTFSFPAALIILLLSWIWLQWLFLGFNFKEMFKC--GKTKTVQQKACAEVIKQEYQKLGPIRYQEIVTLVLFIIMALLWFSRD-PGFVPGWSALFSEYPGFATDSTVALLIGLLFFLIPA 401
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: YKG6_CAEEL (Uncharacterized transporter B0285.6 OS=Caenorhabditis elegans GN=B0285.6 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16 Identity = 73/277 (26.35%), Postives = 115/277 (41.52%), Query Frame = 3 Query: 18 PPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNL------------------------PEVPLQSTLV--------RKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFP-EANPISFSTWFCFGFPLALVIFVALWAILCLFY------CSRGSGPALSEYLDKANLKREL----DMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALF-NDRAGDGTASVVMXTLLFIIPSMKQ--------------KGEKLMDWN 674 P L+ G T+F+S+W+ + A +M P+A +L+ + PE + L R CK ++L V +++ +GG T+ TG NLI + FP E + IS+ +W F P + + W I+ L + P +E ++ KR + D LGPM +AEK L +F + + W++ S IPGW LF D + +V LLFI P K + E L+DW+ Sbjct: 125 PHWLMAGFMIITSFISLWISDTACCALMAPIAYALLEEIMIPKMRPEEKENEIEVMKIFDKEDPEEKEKKKLDTSRLSVRDRGICKCMMLLVAHASLIGGTGTINSTGPNLIFRDNIEKNFPNEDHGISYLSWMAFAIPPMIFYMFSSWFIVQLQFLGPRHLMGMFREPTETEKQEEEVAKRAVWKSYDQLGPMTWAEKSTLVIFVLAVLSWVS-SDPKVIPGWSDLFRKGYVTDSCSGLVAVFLLFIWPKKKPDFRIFRKDKSRPSVRQEPLIDWD 400
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: NAD2_CAEEL (Sodium-dependent high-affinity dicarboxylate transporter 2 OS=Caenorhabditis elegans GN=nac-2 PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15 Identity = 60/244 (24.59%), Postives = 109/244 (44.67%), Query Frame = 3 Query: 21 PLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNLPEV--------------PLQSTLVRK------------YCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEAN-PISFSTWFCFGFPLALVIFVALWAILCLFYCSRGS------GPALSE----YLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR--AGDGTASVVMXTLLFIIP 635 P++LLG T+F+S ++ + A +M P A +L ++ + P +T+ K +CKA++L +++ +GG + +T TG NL+ +PE +++ W F P V +A + IL ++ + P+ E L + N++ + LG +++ EK V F +LI W++R PGWG L R D + V++ +LF+ P Sbjct: 118 PVMLLGFMCITSFISFFVSDTACTALMCPTAVALLMSMSDAVQHLKEDHRKPKPPPDDATVAEKLRIDDMTPQDAGFCKALILACAHASLIGGTAIITSTGPNLVFRENIHKRYPEGQVTMTYLQWMVFAIPPMFVYLLASYIILVCYFMGPSTFARWFERPSKEEAHLKKLIEKNIQTMYEDLGDVSWGEKSVFVFFILLIGSWISRD-PGFTPGWGDLLPHRNFISDSVSGVLISCILFVWP 360
BLAST of FC876427 vs. ExPASy Swiss-Prot
Match: INDY2_DROME (Protein I'm not dead yet 2 OS=Drosophila melanogaster GN=Indy-2 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 60/237 (25.32%), Postives = 110/237 (46.41%), Query Frame = 3 Query: 15 NPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNLP------------EVPLQS---TLVRKYCKAVVLGVIYSAAVGGMSTLTGTGVNLILVGMWKTYFPEAN-PISFSTWFCFGFPLALVIFVALWAI------LCLFYCSRGSGPALSE------YLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMXTLLFIIPS 638 +P L +G+ + F+ +W+ N A +M P+ ++ L E P++ K A G+ Y++++GG+ TL GTG NL+ G++ FP + I+F+ + + PL +++ V L I + LF + +G ++E ++ +R +D LGPM+ E + F +I L +TR +PGW L N + G + + L+F +P+ Sbjct: 131 SPRRLFVGLMSVSTFMGLWISNSAGTAMMCPIVKALVNELDTNKIFPVYMTQEEEPVEEGEPPHPSKITVAFYAGIAYASSIGGLGTLIGTGTNLVFRGIYTERFPTSTVEITFANFMFYSIPLMVIVNVTLVIIAFLITHMGLFRPNSKTGKIIAEANTNRKLMEDVLRQRHID-LGPMSCHEIQMAIAFAFMIVLLITRK-PGFVPGWSDLINRKVVGSASGLSFIVLLIFALPT 365 The following BLAST results are available for this feature:
BLAST of FC876427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876427 ID=FC876427; Name=FC876427; organism=Citrus clementina; type=EST; length=721bpback to top |