FC876429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_HAHCH (3-ketoacyl-CoA thiolase OS=Hahella chejuensis (strain KCTC 2396) GN=fadA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.376e-14 Identity = 52/191 (27.23%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571 VV++ R+ + +AK G F++ A+ L A ++ A+ ++ +++P+EV D++ G V R + P T +TVNR C S + A+ A AI G D+ + G+E M ++ NP ++ + MG+T+E +A+ G++RQ+QD G+F++EII + Sbjct: 8 VVVIDCVRSPMGRAKAGCFRNVRAETLSATLIDALFDRNDKVDPAEVEDLIWGCVNQTLEQGFNVARQISLLTRIPHTSSAQTVNRLCGSAMSAIHTAAQAIMTGNGDVFVVGGVEHMGHVPMTQGFDHNPAASKYSAKASNM--MGLTAEMLAKMHGISRQQQDEFGARSHRLAHEATLEGRFRNEIISI 196
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.376e-14 Identity = 64/221 (28.96%), Postives = 100/221 (45.25%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622 VVIV A RT + ++K G F++ A+DL A ++++++ + L + + DI G V R AA A P +VP TVNR C S +QA+ D A I G + G+E M +S +P + MG+T+E +A+ G++R+ QD G FK+EIIP +++ P+T VE T+ Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTTEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATL 222
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ECOL6 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6 GN=fadA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.376e-14 Identity = 64/221 (28.96%), Postives = 100/221 (45.25%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622 VVIV A RT + ++K G F++ A+DL A ++++++ + L + + DI G V R AA A P +VP TVNR C S +QA+ D A I G + G+E M +S +P + MG+T+E +A+ G++R+ QD G FK+EIIP +++ P+T VE T+ Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATL 222
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.376e-14 Identity = 64/221 (28.96%), Postives = 100/221 (45.25%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622 VVIV A RT + ++K G F++ A+DL A ++++++ + L + + DI G V R AA A P +VP TVNR C S +QA+ D A I G + G+E M +S +P + MG+T+E +A+ G++R+ QD G FK+EIIP +++ P+T VE T+ Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATL 222
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.376e-14 Identity = 64/221 (28.96%), Postives = 100/221 (45.25%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622 VVIV A RT + ++K G F++ A+DL A ++++++ + L + + DI G V R AA A P +VP TVNR C S +QA+ D A I G + G+E M +S +P + MG+T+E +A+ G++R+ QD G FK+EIIP +++ P+T VE T+ Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATL 222
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ECO57 (3-ketoacyl-CoA thiolase OS=Escherichia coli O157:H7 GN=fadA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.376e-14 Identity = 64/221 (28.96%), Postives = 100/221 (45.25%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622 VVIV A RT + ++K G F++ A+DL A ++++++ + L + + DI G V R AA A P +VP TVNR C S +QA+ D A I G + G+E M +S +P + MG+T+E +A+ G++R+ QD G FK+EIIP +++ P+T VE T+ Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATL 222
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIL_MYCTU (Probable acetyl-CoA acetyltransferase OS=Mycobacterium tuberculosis GN=fadA4 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.797e-14 Identity = 69/206 (33.50%), Postives = 93/206 (45.15%), Query Frame = 2 Query: 5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT------VNSISVVGQVNPKV----------EIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN 574 +IVA RT I K G KD A +L A +K +EK + S V +++G VL G+ + M R AA AG VP T+N+ C SG+ A+A I+A +D+ +A G ESMT +NS S + V ++FT PMG +E TR EQD G F DE+IPVN Sbjct: 1 MIVAGARTPIGKLM-GSLKDFSASELGAIAIKGALEKANVPASLVEYVIMGQVLTAGAGQ-MPARQAAVAAGIGWDVPALTINKMCLSGIDAIALADQLIRAREFDVVVAGGQESMTKAPHLLMNSRSGYKYGDVTVLDHMAYDGLHDVFTDQ-----PMGALTEQRNDVDMFTRSEQDEYAAASHQKAAAAWKDGVFADEVIPVN 199
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIL_MYCBO (Probable acetyl-CoA acetyltransferase OS=Mycobacterium bovis GN=fadA4 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.797e-14 Identity = 69/206 (33.50%), Postives = 93/206 (45.15%), Query Frame = 2 Query: 5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT------VNSISVVGQVNPKV----------EIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN 574 +IVA RT I K G KD A +L A +K +EK + S V +++G VL G+ + M R AA AG VP T+N+ C SG+ A+A I+A +D+ +A G ESMT +NS S + V ++FT PMG +E TR EQD G F DE+IPVN Sbjct: 1 MIVAGARTPIGKLM-GSLKDFSASELGAIAIKGALEKANVPASLVEYVIMGQVLTAGAGQ-MPARQAAVAAGIGWDVPALTINKMCLSGIDAIALADQLIRAREFDVVVAGGQESMTKAPHLLMNSRSGYKYGDVTVLDHMAYDGLHDVFTDQ-----PMGALTEQRNDVDMFTRSEQDEYAAASHQKAAAAWKDGVFADEVIPVN 199
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: PCAF_PSEAE (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa GN=pcaF PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.797e-14 Identity = 65/210 (30.95%), Postives = 100/210 (47.62%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN------PKVEIFT----------QARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580 V I A RT I + G ADDL A LKA++E+ ++ S + ++ +G G RMA AG PE+VP T+NR C+SG+ A+ AI G ++ IA G+ESM+ + V+G+ + K+E T + + + PM T++NVA + V+R +QD G F +EI+PV + Sbjct: 5 VFICDAVRTPIGRFG-GSLSAVRADDLAAVPLKALVERNPGVDWSALDEVFLGCANQAGEDNRNVARMALLLAGLPESVPGVTLNRLCASGMDAIGTAFRAIACGEMELAIAGGVESMS-RAPYVMGKADSAFGRGQKIEDTTIGWRFVNPLMKEQYGIDPMPQTADNVADDYRVSRADQDAFALRSQQRAGRAQEAGFFAEEIVPVTIR 212
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIC_RAT (Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus GN=Acat2 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.347e-14 Identity = 64/201 (31.84%), Postives = 98/201 (48.76%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-------VNSISVVGQVNPKVEIFTQA-RDCL--LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN 574 VVI++A RTAI + G +L V+K V+++ ++ P EV +++ G VL G + R A+ AG P +VP + C SGL+AV A +I G I +A G+E+M+ + S +G+V I D MGIT+ENVA+++ V+R+ QD G F EI+PV+ Sbjct: 8 VVIISAARTAI-GSFNGALSTVPVHNLGTTVIKEVLQRAKVAPEEVSEVIFGHVLTAGCGQN-PTRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQSIAMGDSTIVVAGGMENMSKAPHLAHLRSGVKMGEVPLADSILCDGLTDAFHNYHMGITAENVAKKWQVSREAQDKVAVVSQNRAEHAQKAGHFDKEIVPVH 206 The following BLAST results are available for this feature:
BLAST of FC876429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876429 ID=FC876429; Name=FC876429; organism=Citrus clementina; type=EST; length=639bpback to top |