FC876429

Overview
NameFC876429
Unique NameFC876429
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length639
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: PCAF_PSEPU (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.347e-14
Identity = 71/223 (31.84%), Postives = 102/223 (45.74%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPS----EVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV------NPKVEIFTQARDCLLP----------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEK 610
            V I  A RT I +   G      ADDL A  LKA+IE    NP+    +V ++  G     G       RMA   AG PE++P  T+NR C+SG+ A+     AI +G  ++ IA G+ESM+  +  V+G+       N K+E  T     + P          M  T++NVA  + V+R +QD                G F +EI+PV       +T VE+
Sbjct:    4 VFICDAIRTPIGRFG-GALAGVRADDLAAVPLKALIEP---NPAVQWDQVDEVFFGCANQAGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTAFRAIASGEMELAIAGGVESMS-RAPFVMGKAESGYSRNMKLEDTTIGWRFINPLMKSQYGVDSMPETADNVADDYQVSRADQDAFALRSQQKAAAAQAAGFFAEEIVPVRIAHKKGETIVER 221          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ENT38 (3-ketoacyl-CoA thiolase OS=Enterobacter sp. (strain 638) GN=fadA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.347e-14
Identity = 59/197 (29.95%), Postives = 92/197 (46.70%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVD 589
            VVIV A RT + ++K G F+   A+DL A ++++++ +   L  S + DI  G V           R A+  A  P +VP  TVNR C S +QA+ D A  I  G   + +  G+E M    +S     +P +            MG+T+E +++  G++R+ QD                G FK+EI+P     VD
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRHVRAEDLSAHLMRSLLARNPALEASAIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCMVGGVEHMGHVPMSHGVDFHPGMS--RNVAKAAGMMGLTAEMLSRMHGISREMQDQFAARSHARAWAATQSGAFKNEILPTGGHDVD 198          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIL_RAT (Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.066e-14
Identity = 63/208 (30.29%), Postives = 97/208 (46.63%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADD----LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT----VNSISVVGQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKI 583
            VVIV+A RT I     G F  +LA      L    ++  IEK  +   EV ++ +G V+  G  +A   R A   AG P   P  TVN+ C+SG++A+   + ++  G  D+ +A G+ESM+    V S         K+E     +D L      + MG  +EN A++  ++R+EQD                GKF +EI P+   +
Sbjct:   39 VVIVSATRTPI-----GSFLGSLASQPATKLGTIAIQGAIEKAGIPKEEVKEVYMGNVIQGGEGQA-PTRQATLGAGLPIATPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMSRGATPYGGVKLEDLI-VKDGLTDVYNKIHMGNCAENTAKKLSISREEQDKYAIGSYTRSKEAWDAGKFANEITPITISV 239          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIC_HUMAN (Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.066e-14
Identity = 64/204 (31.37%), Postives = 95/204 (46.57%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLA----DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLP----------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571
            VVIV+A RT I     G F   LA     DL + V+K V+++  + P +V +++ G VLA G  +    R A+  AG P +VP  +    C SGL+AV     +I  G   I +A G+E+M+        +   K+         L            MGIT+ENVA+++ V+R++QD                G F  EI+PV
Sbjct:    8 VVIVSAARTII-----GSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQN-PVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPV 205          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.066e-14
Identity = 63/221 (28.51%), Postives = 100/221 (45.25%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622
            VVIV A RT + ++K G F++  A+DL A ++++++ +   L  + + DI  G V           R AA  A  P +VP  TVNR C S +QA+ D A  I  G     +  G+E M    +S     +P +            MG+T+E +A+  G++R+ QD                G FK+EIIP                +++ P+T +E   T+
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTMEALATL 222          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ENTCL (3-ketoacyl-CoA thiolase OS=Enterobacter cloacae GN=fadA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.066e-14
Identity = 62/221 (28.05%), Postives = 102/221 (46.15%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622
            VVIV A RT + ++K G F++  A+DL A ++++++ +   L+P+ + DI  G +           R A+  A  P +VP  TVNR C S +QA+ D A  I  G     +  G+E M    +S     +P +            MG+T+E +++  G++R+ QD                G FK+EIIP                +++ P+T VE   T+
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAALDDIYWGCLHQTLEQGFNLARNASLLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVHFHPGMS--RNVAKAAGMMGLTAEMLSRLHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFSYDEVIRPETTVEALSTL 222          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_CITK8 (3-ketoacyl-CoA thiolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.066e-14
Identity = 63/221 (28.51%), Postives = 100/221 (45.25%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622
            VVIV A RT + ++K G F++  A+DL A ++++++ +   L  + + DI  G V           R AA  A  P +VP  TVNR C S +QA+ D A  I  G     +  G+E M    +S     +P +            MG+T+E +++  G++R+ QD                G FK+EIIP                +++ P+T VE   T+
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEATAIDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQTCLIGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLSRMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFSYDEVIRPETTVEALSTL 222          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SALTY (3-ketoacyl-CoA thiolase OS=Salmonella typhimurium GN=fadA PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.004e-14
Identity = 63/221 (28.51%), Postives = 100/221 (45.25%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622
            VVIV A RT + ++K G F++  A+DL A ++++++ +   L  + + DI  G V           R AA  A  P +VP  TVNR C S +QA+ D A  I  G   + +  G+E M    +S     +P +            MG+T+E +++  G++R+ QD                G FK EIIP                +++ P+T VE   T+
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTL 222          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SALTI (3-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fadA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.004e-14
Identity = 63/221 (28.51%), Postives = 100/221 (45.25%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622
            VVIV A RT + ++K G F++  A+DL A ++++++ +   L  + + DI  G V           R AA  A  P +VP  TVNR C S +QA+ D A  I  G   + +  G+E M    +S     +P +            MG+T+E +++  G++R+ QD                G FK EIIP                +++ P+T VE   T+
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTL 222          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SALPA (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A GN=fadA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.004e-14
Identity = 63/221 (28.51%), Postives = 100/221 (45.25%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622
            VVIV A RT + ++K G F++  A+DL A ++++++ +   L  + + DI  G V           R AA  A  P +VP  TVNR C S +QA+ D A  I  G   + +  G+E M    +S     +P +            MG+T+E +++  G++R+ QD                G FK EIIP                +++ P+T VE   T+
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTL 222          
The following BLAST results are available for this feature:
BLAST of FC876429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
PCAF_PSEPU2.347e-1431.84Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida... [more]
FADA_ENT382.347e-1429.953-ketoacyl-CoA thiolase OS=Enterobacter sp. (strai... [more]
THIL_RAT3.066e-1430.29Acetyl-CoA acetyltransferase, mitochondrial OS=Rat... [more]
THIC_HUMAN3.066e-1431.37Acetyl-CoA acetyltransferase, cytosolic OS=Homo sa... [more]
FADA_ESCF33.066e-1428.513-ketoacyl-CoA thiolase OS=Escherichia fergusonii ... [more]
FADA_ENTCL3.066e-1428.053-ketoacyl-CoA thiolase OS=Enterobacter cloacae GN... [more]
FADA_CITK83.066e-1428.513-ketoacyl-CoA thiolase OS=Citrobacter koseri (str... [more]
FADA_SALTY4.004e-1428.513-ketoacyl-CoA thiolase OS=Salmonella typhimurium ... [more]
FADA_SALTI4.004e-1428.513-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fad... [more]
FADA_SALPA4.004e-1428.513-ketoacyl-CoA thiolase OS=Salmonella paratyphi A ... [more]

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Properties
Property NameValue
Genbank descriptionC32004F09EF DevOvary1 Citrus clementina cDNA clone C32004F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876429 ID=FC876429; Name=FC876429; organism=Citrus clementina; type=EST; length=639bp
CGTCGTAATTGTGGCTGCATACCGTACTGCAATTTGCAAGGCGAAACGTG
GAGGCTTCAAGGATACTCTTGCCGATGATCTGCTTGCACCTGTTCTGAAG
GCAGTGATAGAGAAAACGAGGTTGAATCCCAGCGAAGTAGGGGATATAGT
TGTTGGTACAGTCTTGGCACCTGGCTCAACAAGAGCCATGGAGTGTAGGA
TGGCAGCGTTCTATGCTGGTTTCCCTGAAACGGTGCCCCTCAGAACTGTC
AACAGGCAGTGTTCATCTGGCTTGCAGGCGGTTGCTGATGTTGCAACTGC
TATAAAAGCTGGATTGTATGACATTGGTATTGCTGCTGGATTGGAAAGCA
TGACTGTGAATTCTATTAGCGTTGTTGGCCAAGTTAACCCCAAAGTGGAG
ATCTTTACTCAAGCTCGGGACTGTCTTCTTCCTATGGGTATCACTTCTGA
AAATGTTGCACAAAGATTTGGTGTGACACGACAAGAGCAAGACCTGGCTG
CCATTGAATCTCATAGGCGTGCTGCTGCTGCAACTGCATCTGGCAAGTTT
AAAGATGAAATTATTCCAGTGAATACCAAGATTGTGGACCCAAAAACTGG
AGTGGAGAAGCGTGTCACAATTTCTGTGGATGATGGAAT
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