FC876429

Overview
NameFC876429
Unique NameFC876429
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length639
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIC_MOUSE (Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus GN=Acat2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 8.920e-14
Identity = 63/200 (31.50%), Postives = 97/200 (48.50%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-------VNSISVVGQVNPKVEIFTQA-RDCL--LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571
            VVIV+A RTAI  +  G        ++   V+K V+++ ++ P EV +++ G VL  G  +    R A+  AG P +VP  +    C SGL+AV   A +I  G   I +A G+E+M+       + +   +G+V     I      D      MGIT+ENVA+++ V+R+ QD                G F  EI+PV
Sbjct:    8 VVIVSAARTAI-GSFNGALSTVPVHEMGTTVIKEVLQRAKVAPEEVSEVIFGHVLTAGCGQN-PTRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQSIAMGDSTIVVAGGMENMSKAPHLTHLRTGVRMGEVPLADSILCDGLTDAFHNYHMGITAENVAKKWQVSREAQDKVAVLSQNRAEHAQKAGHFDKEIVPV 205          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: PCAF_PSESB (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (strain B13) GN=pcaF PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.920e-14
Identity = 65/210 (30.95%), Postives = 103/210 (49.05%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN------PKVEIFT----------QARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            V I  A RT I +   G      ADDL A  +KA++E+  +++ S++ ++ +G     G       RMA   AG P++VP  T+NR C+SG+ AV     AI +G  ++ IA G+ESM+  +  V+G+ +       K+E  T          +A+  +  M  T++NVA  + V+R +QD                G F +EI+PV  K
Sbjct:    5 VYICDAVRTPIGRFG-GSLAAVRADDLAAVPVKALVERNPQVDWSQLDEVYLGCANQAGEDNRNVARMALLLAGLPDSVPGVTLNRLCASGMDAVGTAFRAIASGEAELVIAGGVESMS-RAPYVMGKADSAFGRGQKIEDTTIGWRFINPLMKAQYGVDAMPETADNVADDYKVSRADQDAFALRSQQLAGRAQAAGYFAEEIVPVVIK 212          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIL_HUMAN (Acetyl-CoA acetyltransferase, mitochondrial OS=Homo sapiens GN=ACAT1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.165e-13
Identity = 63/208 (30.29%), Postives = 97/208 (46.63%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTL----ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT----VNSISVVGQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKI 583
            VVIV+A RT I     G F  +L    A  L +  ++  IEK  +   EV +  +G VL  G  +A   R A   AG P + P  T+N+ C+SG++A+   + ++  G  D+ +A G+ESM+    V +         K+E     +D L      + MG  +EN A++  + R EQD                GKF +E+IPV   +
Sbjct:   42 VVIVSATRTPI-----GSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQA-PTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLI-VKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTV 242          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.165e-13
Identity = 63/205 (30.73%), Postives = 97/205 (47.32%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKR 613
            VVI+ A RT + ++K G F+   A+DL A +++ V+ +   LN +E+ DI  G V           R A+  A  P +VP  TVNR C S +QA+ D A AI  G   + +  G+E M    ++     +P +   T A+   + MG+T+E +A+   ++RQ QD                  F  EI+  N    D   G+ KR
Sbjct:    4 VVIIDAVRTPMGRSKGGAFRQVRAEDLSAHLMREVLSRNPELNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAQVSLIGGVEHMGHVPMNHGVDFHPGMG-RTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAVRSHQRAYAATQADHFAKEIVATNGHDAD---GILKR 203          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIB_CANTR (Acetyl-CoA acetyltransferase IB OS=Candida tropicalis GN=PACTB PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.522e-13
Identity = 66/209 (31.58%), Postives = 97/209 (46.41%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLAD----DLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARDCLLP------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            V IV+  RT I     G F+ +L+     DL A  +KA + K  ++ P +V +IV G VL     +A   R  A  AG P+++   T+N+ C+SG++AV   A  I  G  DI +  G ESM+     + S     +    V +    +D LL       MG+ +E  A+  G +R++QD                GKFK EI PV  K
Sbjct:    6 VYIVSTARTPI-----GSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVGQA-PARQVALKAGLPDSIIASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSNTPYYLPSARSGARYGDAVMVDGVQKDGLLDVYEEKLMGVAAEKCAKDHGFSREDQDNFAINSYKKAGKALSEGKFKSEIAPVTIK 208          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIA_CANTR (Acetyl-CoA acetyltransferase IA OS=Candida tropicalis GN=PACTA PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.522e-13
Identity = 65/209 (31.10%), Postives = 97/209 (46.41%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLAD----DLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARDCLLP------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            V IV+  RT I     G F+ +L+     DL A  +KA + K  ++ P +V +IV G VL     +A   R  A  AG P+++   T+N+ C+SG++AV   A  I  G  DI +  G ESM+     + S     +    + +    +D LL       MG+ +E  A+  G +R++QD                GKFK EI PV  K
Sbjct:    6 VYIVSTARTPI-----GSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVGQA-PARQVALKAGLPDSIVASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSNTPYYLPSARSGARYGDAIMVDGVQKDGLLDVYEEKLMGVAAEKCAKDHGFSREDQDNFAINSYKKAGKALSEGKFKSEIAPVTIK 208          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SHIFL (3-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fadA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.522e-13
Identity = 61/221 (27.60%), Postives = 99/221 (44.80%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622
            VVIV A RT + ++K G F++  A+DL A ++++++ +   L  + + DI  G V           R AA  A  P +VP  TVNR C S +QA+ D A  I  G     +  G+E   +  + +   V+    +          MG+T+E +A+  G++R+ QD                  FK+EIIP                +++ P+T VE   T+
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEH--IGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATL 222          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SHIF8 (3-ketoacyl-CoA thiolase OS=Shigella flexneri serotype 5b (strain 8401) GN=fadA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.522e-13
Identity = 61/221 (27.60%), Postives = 99/221 (44.80%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622
            VVIV A RT + ++K G F++  A+DL A ++++++ +   L  + + DI  G V           R AA  A  P +VP  TVNR C S +QA+ D A  I  G     +  G+E   +  + +   V+    +          MG+T+E +A+  G++R+ QD                  FK+EIIP                +++ P+T VE   T+
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEH--IGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATL 222          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.522e-13
Identity = 55/187 (29.41%), Postives = 89/187 (47.59%), Query Frame = 2
Query:    5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAV-IEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEI 562
            VIV   RT + ++K G F++  A+ L A ++KA+ I   +L+PS + D++ G V           R A+  AG P+T    TVNR C S + A+   A AI  G+ D  I  G+E M    + +   V+    +  +       MG+T+E + +  G++R++QD                G+F  EI
Sbjct:    5 VIVDCIRTPMGRSKAGVFRNVRAETLSAELMKALLIRNPQLDPSLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHM--GHVPMNHGVDFHPGLANRVAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQRAHAATVEGRFAKEI 189          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.522e-13
Identity = 58/191 (30.37%), Postives = 90/191 (47.12%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571
            VVIV A RT + ++K G F+   A+DL A ++++++ +   ++P+ + DI  G V           R AA  A  P +VP  TVNR C S +QA+ D A AI  G     +  G+E M    +S     +P +            MG+T+E +A+  G++R+ QD                G F  EI+ V
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRHVRAEDLSAHLMRSLLSRNPSVDPATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPATTVNRLCGSSMQALHDAARAIMVGDARTCLIGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLARMHGISREMQDRFAARSHQRAAAATQAGHFAAEIVAV 192          
The following BLAST results are available for this feature:
BLAST of FC876429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
THIC_MOUSE8.920e-1431.50Acetyl-CoA acetyltransferase, cytosolic OS=Mus mus... [more]
PCAF_PSESB8.920e-1430.95Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (s... [more]
THIL_HUMAN1.165e-1330.29Acetyl-CoA acetyltransferase, mitochondrial OS=Hom... [more]
FADA_YERE81.165e-1330.733-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
THIB_CANTR1.522e-1331.58Acetyl-CoA acetyltransferase IB OS=Candida tropica... [more]
THIA_CANTR1.522e-1331.10Acetyl-CoA acetyltransferase IA OS=Candida tropica... [more]
FADA_SHIFL1.522e-1327.603-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fa... [more]
FADA_SHIF81.522e-1327.603-ketoacyl-CoA thiolase OS=Shigella flexneri serot... [more]
FADA_SHEDO1.522e-1329.413-ketoacyl-CoA thiolase OS=Shewanella denitrifican... [more]
FADA_ERWT91.522e-1330.373-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (s... [more]

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Properties
Property NameValue
Genbank descriptionC32004F09EF DevOvary1 Citrus clementina cDNA clone C32004F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876429 ID=FC876429; Name=FC876429; organism=Citrus clementina; type=EST; length=639bp
CGTCGTAATTGTGGCTGCATACCGTACTGCAATTTGCAAGGCGAAACGTG
GAGGCTTCAAGGATACTCTTGCCGATGATCTGCTTGCACCTGTTCTGAAG
GCAGTGATAGAGAAAACGAGGTTGAATCCCAGCGAAGTAGGGGATATAGT
TGTTGGTACAGTCTTGGCACCTGGCTCAACAAGAGCCATGGAGTGTAGGA
TGGCAGCGTTCTATGCTGGTTTCCCTGAAACGGTGCCCCTCAGAACTGTC
AACAGGCAGTGTTCATCTGGCTTGCAGGCGGTTGCTGATGTTGCAACTGC
TATAAAAGCTGGATTGTATGACATTGGTATTGCTGCTGGATTGGAAAGCA
TGACTGTGAATTCTATTAGCGTTGTTGGCCAAGTTAACCCCAAAGTGGAG
ATCTTTACTCAAGCTCGGGACTGTCTTCTTCCTATGGGTATCACTTCTGA
AAATGTTGCACAAAGATTTGGTGTGACACGACAAGAGCAAGACCTGGCTG
CCATTGAATCTCATAGGCGTGCTGCTGCTGCAACTGCATCTGGCAAGTTT
AAAGATGAAATTATTCCAGTGAATACCAAGATTGTGGACCCAAAAACTGG
AGTGGAGAAGCGTGTCACAATTTCTGTGGATGATGGAAT
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