FC876429

Overview
NameFC876429
Unique NameFC876429
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length639
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THILA_XENLA (Acetyl-CoA acetyltransferase A, mitochondrial OS=Xenopus laevis GN=acat1-A PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12
Identity = 61/204 (29.90%), Postives = 96/204 (47.06%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTL----ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP----KVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571
            VVI +A RT I     G F+ TL    A  L +  +KA +E+  +   EV ++ +G VL  G  +A   R A   AG   + P  T+N+ C+SG+++V   A ++  G   + +A G+ESM+     +     P    K+E     +D L      + MG  +EN A++F ++R+EQD                G   +EI PV
Sbjct:   35 VVIASAARTPI-----GSFQGTLSSLPATKLGSIAIKAAVERAGIPADEVKEVYMGNVLQAGQGQAPS-RQATLGAGLAISTPTTTINKVCASGMKSVMLAAQSLMCGHQQVMVAGGMESMSNVPYCMSRGATPYGGVKLEDLI-VKDGLTDVYNKIHMGNCAENTAKKFSISREEQDSFAIHSYTRSKAAWDSGLIANEIAPV 231          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADI_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadI PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.870e-12
Identity = 63/242 (26.03%), Postives = 105/242 (43.39%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL----APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-------------VGQVNPKVEIFTQAR--DCL------------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEI----IPVNTKIVDPKTGVEKRVTI 622
            + IV+  RT   K +   F    A D+   V+  ++E+   N SE+  +V G V+    AP   R +         G P +V   +V+R C++  QA+A+VA +I AG   +GIA G +S +V  I V                +  +++IF++ R  D L            L MG T+E +A+   ++R++QD                GK KDE+    +P     ++    + K  T+
Sbjct:   15 IAIVSGLRTPFAK-QATAFHHVPALDMGKLVVNEMLERLNFNKSEIDQLVFGQVVQMPEAPNIAREI-----VLGTGMPVSVDAYSVSRACATSFQAIANVAESIMAGSVTVGIAGGADSSSVLPIGVSKKLAGSLVDLNKARTLGQRLKIFSKLRLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTHNISREDQDALAHRSHSLATQAWADGKLKDEVMTAHLPPYKSFIEEDNNIRKNSTV 250          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIM_BOVIN (3-ketoacyl-CoA thiolase, mitochondrial OS=Bos taurus GN=ACAA2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.349e-12
Identity = 56/204 (27.45%), Postives = 90/204 (44.12%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVE----IFTQARD--CLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            V IVAA RT    A  G  KD    D+     +A +   R++P  V  +VVG V+   S      R      G P+  P  T+NR C SG Q++      I +   ++ +  G ESM+     V +I    ++  +++    ++T   D    +PM IT+EN+A +  ++R++ D                G F +E+ PV  K
Sbjct:    7 VFIVAAKRTPF-GAYGGLLKDFTPTDMAEFAARAALSAGRVSPETVDSVVVGNVMQSSSDAIYLARHVGLRVGIPKETPAITINRLCGSGFQSIVSGCQEICSRDSEVVLCGGTESMSQAPYCVRNIRFGTKLGSELKLEDTLWTGLTDTHVQMPMAITAENLAVKHQISREDCDRYALQSQQRWKTANDAGYFDNEMAPVEVK 209          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIL1_DICDI (Probable acetyl-CoA acetyltransferase OS=Dictyostelium discoideum GN=DDB_G0271544 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.349e-12
Identity = 60/223 (26.91%), Postives = 101/223 (45.29%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPV-LKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARDCLL------PMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDD 634
            VVIV+A RT I     GG   T+    L+ + ++  +++  + PS+V + ++G V++    +A   R  A  AG  +     T+N+ CSSG++A+   A +I  G     +A G ESM+      + +    +   +  I    RD L        MG+  ++ A ++ +TR++QD                G F DEI+ V      P  G   +VT  V+D
Sbjct:   26 VVIVSAVRTPI--GSIGGSLSTIPGTKLSSITIEEAVKRAGIKPSDVDEAIIGNVISANLGQA-PARQCALGAGLEQKTITTTINKVCSSGMKAIVFGAQSIALGHSKTVVAGGFESMSQVPYYADKMRFGAKYGNQTFIDGLVRDGLADAYNGSAMGVCGDDCADKYKITREQQDKFAVDSYLRALEAQKNGFFNDEIVQV------PIVGRGGKVTYVVED 239          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.349e-12
Identity = 49/165 (29.70%), Postives = 84/165 (50.91%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 493
            VV+V   RT + ++K G F++  A+ L A ++  +IE+   L+P+E+ DI+ G V           R A      P +V   TVNR C S +QA+ D  + I +G  D+ +  G+E M    + +   ++    I   A      MG+T+E + ++ G++R+ QD
Sbjct:    4 VVVVDCIRTPMGRSKGGIFRNVRAETLSAHLMSKLIERNPNLDPNEIEDIIWGCVQQTKEQGFNIARNAQLLTDIPRSVAAVTVNRLCGSSMQALHDATSGIMSGRGDVYMIGGVEHM--GHVPMDFNIDFHPGIAKTAARASGSMGMTAELLGRQNGISREMQD 166          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: VRAB_STAAW (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MW2) GN=vraB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-11
Identity = 60/202 (29.70%), Postives = 94/202 (46.53%), Query Frame = 2
Query:    5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT--------VNSI--SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            VIVAA RTA  K   G  K    + LL P+ +   EK     S++ D+V+G V+  G   A   R A   AG  +++P  T++RQC SGL++V      I+AG   + IA G+ES +         +S+  + + +   +     +  D  +  G  +ENVA+ + V+R+ QD                G    EI+P+  K
Sbjct:    5 VIVAAKRTAFGKYG-GTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNGGNIA---RKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQG--AENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK 200          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: VRAB_STAAS (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MSSA476) GN=vraB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-11
Identity = 60/202 (29.70%), Postives = 94/202 (46.53%), Query Frame = 2
Query:    5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT--------VNSI--SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            VIVAA RTA  K   G  K    + LL P+ +   EK     S++ D+V+G V+  G   A   R A   AG  +++P  T++RQC SGL++V      I+AG   + IA G+ES +         +S+  + + +   +     +  D  +  G  +ENVA+ + V+R+ QD                G    EI+P+  K
Sbjct:    5 VIVAAKRTAFGKYG-GTLKHLEPEQLLKPLFQHFKEKYLEVISKIDDVVLGNVVGNGGNIA---RKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQG--AENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK 200          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: VRAB_STAAN (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain N315) GN=vraB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-11
Identity = 60/202 (29.70%), Postives = 94/202 (46.53%), Query Frame = 2
Query:    5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT--------VNSI--SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            VIVAA RTA  K   G  K    + LL P+ +   EK     S++ D+V+G V+  G   A   R A   AG  +++P  T++RQC SGL++V      I+AG   + IA G+ES +         +S+  + + +   +     +  D  +  G  +ENVA+ + V+R+ QD                G    EI+P+  K
Sbjct:    5 VIVAAKRTAFGKYG-GTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNGGNIA---RKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQG--AENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK 200          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: VRAB_STAAM (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=vraB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-11
Identity = 60/202 (29.70%), Postives = 94/202 (46.53%), Query Frame = 2
Query:    5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT--------VNSI--SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            VIVAA RTA  K   G  K    + LL P+ +   EK     S++ D+V+G V+  G   A   R A   AG  +++P  T++RQC SGL++V      I+AG   + IA G+ES +         +S+  + + +   +     +  D  +  G  +ENVA+ + V+R+ QD                G    EI+P+  K
Sbjct:    5 VIVAAKRTAFGKYG-GTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNGGNIA---RKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQG--AENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK 200          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: VRAB_STAA1 (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=vraB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-11
Identity = 60/202 (29.70%), Postives = 94/202 (46.53%), Query Frame = 2
Query:    5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT--------VNSI--SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            VIVAA RTA  K   G  K    + LL P+ +   EK     S++ D+V+G V+  G   A   R A   AG  +++P  T++RQC SGL++V      I+AG   + IA G+ES +         +S+  + + +   +     +  D  +  G  +ENVA+ + V+R+ QD                G    EI+P+  K
Sbjct:    5 VIVAAKRTAFGKYG-GTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNGGNIA---RKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQG--AENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITVK 200          
The following BLAST results are available for this feature:
BLAST of FC876429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
THILA_XENLA1.682e-1229.90Acetyl-CoA acetyltransferase A, mitochondrial OS=X... [more]
FADI_PSEHT2.870e-1226.033-ketoacyl-CoA thiolase OS=Pseudoalteromonas halop... [more]
THIM_BOVIN8.349e-1227.453-ketoacyl-CoA thiolase, mitochondrial OS=Bos taur... [more]
THIL1_DICDI8.349e-1226.91Probable acetyl-CoA acetyltransferase OS=Dictyoste... [more]
FADA_PSEA68.349e-1229.703-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlan... [more]
VRAB_STAAW1.090e-1129.70Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAAS1.090e-1129.70Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAAN1.090e-1129.70Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAAM1.090e-1129.70Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAA11.090e-1129.70Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]

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Properties
Property NameValue
Genbank descriptionC32004F09EF DevOvary1 Citrus clementina cDNA clone C32004F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876429 ID=FC876429; Name=FC876429; organism=Citrus clementina; type=EST; length=639bp
CGTCGTAATTGTGGCTGCATACCGTACTGCAATTTGCAAGGCGAAACGTG
GAGGCTTCAAGGATACTCTTGCCGATGATCTGCTTGCACCTGTTCTGAAG
GCAGTGATAGAGAAAACGAGGTTGAATCCCAGCGAAGTAGGGGATATAGT
TGTTGGTACAGTCTTGGCACCTGGCTCAACAAGAGCCATGGAGTGTAGGA
TGGCAGCGTTCTATGCTGGTTTCCCTGAAACGGTGCCCCTCAGAACTGTC
AACAGGCAGTGTTCATCTGGCTTGCAGGCGGTTGCTGATGTTGCAACTGC
TATAAAAGCTGGATTGTATGACATTGGTATTGCTGCTGGATTGGAAAGCA
TGACTGTGAATTCTATTAGCGTTGTTGGCCAAGTTAACCCCAAAGTGGAG
ATCTTTACTCAAGCTCGGGACTGTCTTCTTCCTATGGGTATCACTTCTGA
AAATGTTGCACAAAGATTTGGTGTGACACGACAAGAGCAAGACCTGGCTG
CCATTGAATCTCATAGGCGTGCTGCTGCTGCAACTGCATCTGGCAAGTTT
AAAGATGAAATTATTCCAGTGAATACCAAGATTGTGGACCCAAAAACTGG
AGTGGAGAAGCGTGTCACAATTTCTGTGGATGATGGAAT
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