FC876429

Overview
NameFC876429
Unique NameFC876429
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length639
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THILB_XENLA (Acetyl-CoA acetyltransferase B, mitochondrial OS=Xenopus laevis GN=acat1-B PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11
Identity = 57/205 (27.80%), Postives = 94/205 (45.85%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTL----ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT-----------SENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571
            VVI +A RT I     G F+ TL    A  L +  +KA +E+  +   EV ++ +G VL  G  +A   R A   AG   + P  T+N+ C+SG+++V   A ++  G   + +A G+ESM+     +     P   +  +  D ++  G+T           +EN A++  ++R+EQD                G   +EI PV
Sbjct:   35 VVIASAARTPI-----GSFQGTLSSLPATKLGSIAIKAAVERAGIPADEVKEVYMGNVLQAGQGQAPS-RQATLGAGLAISTPTTTINKVCASGMKSVMLAAQSLMCGHQQVMVAGGMESMSNVPYCMSRGATPYGGV--KLEDIIVKDGLTDVYNKFHMGNCAENTAKKLSISREEQDGFAITSYTRSKAAWDSGLIANEIAPV 231          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11
Identity = 51/190 (26.84%), Postives = 90/190 (47.37%), Query Frame = 2
Query:    5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571
            VIV   RT + ++K G F++  A+ L A ++KA++ +   ++P+ + D++ G V           R A+  AG P+T    TVNR C S ++A+   + AI  G+ D  I  G+E M    + +   V+    +          MG+T+E + +  G++R+ QD                G+F +EI  +
Sbjct:    5 VIVDCIRTPMGRSKGGVFRNVRAETLSAELMKALLLRNPGVDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGVPKTAGAVTVNRLCGSSMEALHQASRAIMTGMGDTFIIGGVEHM--GHVPMNHGVDFHPGLAANVAKASGMMGLTAEMLGKLHGISREMQDQFAVRSHQRAHAASIEGRFANEIYAI 192          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: VRAB_STAAC (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain COL) GN=vraB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.173e-11
Identity = 60/202 (29.70%), Postives = 93/202 (46.04%), Query Frame = 2
Query:    5 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT--------VNSI--SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            VIVAA RTA  K   G  K    + LL P+ +   EK     S++ D+V+G V+  G   A   R A   AG  +++P  T++RQC SGL++V      I+AG   + IA G+ES +         +S+  + + +   +     +  D  +  G  +ENVA+ + V+R  QD                G    EI+P+  K
Sbjct:    5 VIVAAKRTAFGKYG-GTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNGGNIA---RKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAPWKIKRPHSVYETALPEFYERASFAPEMSDPSMIQG--AENVAKMYDVSRGLQDEFAYRSHQLTAENVKNGNISQEILPITVK 200          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIL_YEAST (Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae GN=ERG10 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.173e-11
Identity = 62/206 (30.10%), Postives = 95/206 (46.12%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPS-EVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            V IV+  RT I  + +G      A +L A  LK  + K   L+ S +  +I+ G VL+    +A   R  A  AG    +   TVN+ C+S ++A+   A +IK G  D+ +A G ESMT     + +     +    V +    RD L      L MG+ +E  A+ + +TR++QD                GKF +EI+PV  K
Sbjct:    5 VYIVSTARTPI-GSFQGSLSSKTAVELGAVALKGALAKVPELDASKDFDEIIFGNVLSANLGQA-PARQVALAAGLSNHIVASTVNKVCASAMKAIILGAQSIKCGNADVVVAGGCESMTNAPYYMPAARAGAKFGQTVLVDGVERDGLNDAYDGLAMGVHAEKCARDWDITREQQDNFAIESYQKSQKSQKEGKFDNEIVPVTIK 208          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIL_SCHPO (Acetyl-CoA acetyltransferase OS=Schizosaccharomyces pombe GN=erg10 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11
Identity = 59/207 (28.50%), Postives = 92/207 (44.44%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAP--GSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT----VNSISVVGQVNPKVEIFT-QARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKI 583
            V IV+A RT +  +  G F    A  L +  +K  +E+  + PS+V ++ +G V++   G   A +C + A   G P ++   TVN+ C+SG++A    A  I  G  +I +A G ESM+        +  G     VE+     RD L      LPMG  +E  A+   + R  QD                  F+ EI+PV   +
Sbjct:    6 VYIVSAVRTPM-GSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVSANLGQNPARQCALGA---GLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGTESMSNAPYYAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRASQDAFAISSYKRAQNAQATKAFEQEIVPVEVPV 208          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIL_SACBA (Acetyl-CoA acetyltransferase OS=Saccharomyces bayanus GN=ERG10 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.068e-11
Identity = 63/206 (30.58%), Postives = 94/206 (45.63%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPS-EVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            V IV+  RT I  + +G      A +L A  LK  + K   L+ S +  +I+ G VL+    +A   R  A  AG    +   TVN+ C+S ++A+   A +IK G  D+ +A G ESMT     + +     +    V I    RD L      L MG+ +E  A+ + +TR +QD                GKF +EI+PV  K
Sbjct:    5 VYIVSTARTPI-GSFQGSLSSKTAVELGAAALKGALAKVPELDASKDFDEIIFGNVLSANLGQA-PARQVALTAGLGNHIVATTVNKVCASAMKAIILGAQSIKCGNADVVVAGGCESMTNAPYYMPAARGGAKFGQTVLIDGVERDGLNDAYDGLAMGVHAEKCARDWDITRDQQDSFAIESYQKSQQSQKEGKFDNEIVPVTIK 208          
The following BLAST results are available for this feature:
BLAST of FC876429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
THILB_XENLA1.860e-1127.80Acetyl-CoA acetyltransferase B, mitochondrial OS=X... [more]
FADA_SHEAM1.860e-1126.843-ketoacyl-CoA thiolase OS=Shewanella amazonensis ... [more]
VRAB_STAAC3.173e-1129.70Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
THIL_YEAST3.173e-1130.10Acetyl-CoA acetyltransferase OS=Saccharomyces cere... [more]
THIL_SCHPO7.068e-1128.50Acetyl-CoA acetyltransferase OS=Schizosaccharomyce... [more]
THIL_SACBA7.068e-1130.58Acetyl-CoA acetyltransferase OS=Saccharomyces baya... [more]

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Properties
Property NameValue
Genbank descriptionC32004F09EF DevOvary1 Citrus clementina cDNA clone C32004F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876429 ID=FC876429; Name=FC876429; organism=Citrus clementina; type=EST; length=639bp
CGTCGTAATTGTGGCTGCATACCGTACTGCAATTTGCAAGGCGAAACGTG
GAGGCTTCAAGGATACTCTTGCCGATGATCTGCTTGCACCTGTTCTGAAG
GCAGTGATAGAGAAAACGAGGTTGAATCCCAGCGAAGTAGGGGATATAGT
TGTTGGTACAGTCTTGGCACCTGGCTCAACAAGAGCCATGGAGTGTAGGA
TGGCAGCGTTCTATGCTGGTTTCCCTGAAACGGTGCCCCTCAGAACTGTC
AACAGGCAGTGTTCATCTGGCTTGCAGGCGGTTGCTGATGTTGCAACTGC
TATAAAAGCTGGATTGTATGACATTGGTATTGCTGCTGGATTGGAAAGCA
TGACTGTGAATTCTATTAGCGTTGTTGGCCAAGTTAACCCCAAAGTGGAG
ATCTTTACTCAAGCTCGGGACTGTCTTCTTCCTATGGGTATCACTTCTGA
AAATGTTGCACAAAGATTTGGTGTGACACGACAAGAGCAAGACCTGGCTG
CCATTGAATCTCATAGGCGTGCTGCTGCTGCAACTGCATCTGGCAAGTTT
AAAGATGAAATTATTCCAGTGAATACCAAGATTGTGGACCCAAAAACTGG
AGTGGAGAAGCGTGTCACAATTTCTGTGGATGATGGAAT
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