FC876429

Overview
NameFC876429
Unique NameFC876429
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length639
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THLA_STAAS (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0330 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.916e-24
Identity = 76/225 (33.78%), Postives = 120/225 (53.33%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARDCLLP------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK-------IVDPKTGVEKRVTI 622
            VV+ AAYRT I     G FKD  A DL A +++ +I++T LNPSE+ ++++G VL  G  +    R+AA   G PETVP  TVN+ C SGL+++     +I  G  DI +A G+E+M+     VN+     ++  +  + +   D L        MGIT+EN+ +++G++R+EQD                G+F  EI+PV+         +V    GV + V++
Sbjct:    4 VVLAAAYRTPI-GVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQN-PARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLVEQYGISREEQDTFAVNSQQKAVRAQQNGEFDSEIVPVSIPQRKGEPILVTKDEGVRENVSV 226          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THLA_STAAN (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain N315) GN=SA0342 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.916e-24
Identity = 76/225 (33.78%), Postives = 120/225 (53.33%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARDCLLP------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK-------IVDPKTGVEKRVTI 622
            VV+ AAYRT I     G FKD  A DL A +++ +I++T LNPSE+ ++++G VL  G  +    R+AA   G PETVP  TVN+ C SGL+++     +I  G  DI +A G+E+M+     VN+     ++  +  + +   D L        MGIT+EN+ +++G++R+EQD                G+F  EI+PV+         +V    GV + V++
Sbjct:    4 VVLAAAYRTPI-GVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQN-PARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLVEQYGISREEQDTFAVNSQHKAVRAQQNGEFDSEIVPVSIPQRKGEPILVTKDEGVRENVSV 226          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THLA_STAAM (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0354 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.916e-24
Identity = 76/225 (33.78%), Postives = 120/225 (53.33%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARDCLLP------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK-------IVDPKTGVEKRVTI 622
            VV+ AAYRT I     G FKD  A DL A +++ +I++T LNPSE+ ++++G VL  G  +    R+AA   G PETVP  TVN+ C SGL+++     +I  G  DI +A G+E+M+     VN+     ++  +  + +   D L        MGIT+EN+ +++G++R+EQD                G+F  EI+PV+         +V    GV + V++
Sbjct:    4 VVLAAAYRTPI-GVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQN-PARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLVEQYGISREEQDTFAVNSQHKAVRAQQNGEFDSEIVPVSIPQRKGEPILVTKDEGVRENVSV 226          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIL_RALEH (Acetyl-CoA acetyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.218e-22
Identity = 74/201 (36.82%), Postives = 105/201 (52.24%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-----QVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571
            VVIV+A RTA+ K   G      A +L A V+KA +E+  + P +V ++++G VL  GS +    R AA  AG P  VP  T+N+ C SGL+AV   A AI AG  +I +A G E+M+     + G     ++     + T   D L        MGIT+ENVA+ +G+TR+ QD                GKF +EI+PV
Sbjct:    4 VVIVSAARTAVGKFG-GSLAKIPAPELGAVVIKAALERAGVKPEQVSEVIMGQVLTAGSGQN-PARQAAIKAGLPAMVPAMTINKVCGSGLKAVMLAANAIMAGDAEIVVAGGQENMSAAPHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGITAENVAKEYGITREAQDEFAVGSQNKAEAAQKAGKFDEEIVPV 202          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THLA_CLOAB (Acetyl-CoA acetyltransferase OS=Clostridium acetobutylicum GN=thlA PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.900e-22
Identity = 71/204 (34.80%), Postives = 106/204 (51.96%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----VNSISVVGQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK 580
            VVI +A RTAI    +   KD  A DL A  +K  ++K  + P +V ++++G VL  G  +    R A+F AG P  +P  T+N+ C SGL+ V+  A  IKAG  D+ IA G+E+M+      N+     ++     +     D L        MGIT+EN+A+R+ ++R+EQD                G+FKDEI+PV  K
Sbjct:    4 VVIASAVRTAIGSYGKS-LKDVPAVDLGATAIKEAVKKAGIKPEDVNEVILGNVLQAGLGQN-PARQASFKAGLPVEIPAMTINKVCGSGLRTVSLAAQIIKAGDADVIIAGGMENMSRAPYLANNARWGYRMGNAKFVDEMITDGLWDAFNDYHMGITAENIAERWNISREEQDEFALASQKKAEEAIKSGQFKDEIVPVVIK 205          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.589e-21
Identity = 65/205 (31.71%), Postives = 103/205 (50.24%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIP--VNTKIVDPKTGVEK 610
            VV+V A RT I +A RG  +    D+L+   ++ +IEKT ++P  + ++++G  L+      +  RM    AG P   P+  +NR C SGL++V  +A  I++G  +IG+A G ESMT   +     ++ +      A DC+L +G  SE + +  GVTR E D                G F  EIIP  V  + V+   G+ +
Sbjct:    7 VVVVGALRTPIGRATRGKLRSLRNDELVTAAIRGIIEKTGIDPRLIEEVILGHCLSSMEGN-VAARMGVLRAGVPVETPVMIINRLCGSGLESVGLIAEKIRSGRIEIGLAGGFESMTSYGLPKEYTLS-RGGACEDAEDCMLTLGEVSEMLGKTHGVTRSEADEYAVTSQKRALEATKKGHFLAEIIPMRVGDETVERDEGIRE 209          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_CHRSD (3-ketoacyl-CoA thiolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fadA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.769e-21
Identity = 66/191 (34.55%), Postives = 97/191 (50.79%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571
            +V+V A RTA+ KAK G F++  A++L A V++A+ ++   L P+EV D++ G V           R AA   G P TVP +TVNR C S + A+      IKAG+ D  I  G+E M    ++    VNP    +  A    + MG+T+E + +  GV R+EQD                G F +EI+ V
Sbjct:    8 IVVVDAVRTAMAKAKHGAFRNVRAENLSAAVMQALFDRNANLVPAEVDDVIWGCVNQTLEQSMNIARNAAIMTGIPRTVPAQTVNRLCGSSMSALHIATANIKAGMGDFYIIGGVEHMEHVPMTHGVDVNPAASKY--AAKAAMMMGLTAELLGKMHGVGREEQDAFGVRSHQRAQAANENGYFDNEIVGV 196          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: ATOB_PSEAE (Acetyl-CoA acetyltransferase OS=Pseudomonas aeruginosa GN=atoB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.678e-20
Identity = 70/205 (34.15%), Postives = 112/205 (54.63%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLAD----DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-----QVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 571
            VVIVAA RTA+     G F+ +LA     +L A V++ ++E+T L+  +V ++++G VL  GS +    R AA  AG P  VP  T+N+ C SGL+A+   A AI+ G  ++ +A G E+M++    + G     ++     + +   D L        MGIT+EN+A+++G+TR+EQD                G+F+DEI P+
Sbjct:    4 VVIVAATRTAV-----GSFQGSLAGIPAPELGAAVIRRLLEQTGLDAGQVDEVILGQVLTAGSGQN-PARQAAIKAGLPVGVPAMTLNKVCGSGLKALHLGAQAIRCGDAEVIVAGGQENMSLAPYVMPGARTGLRMGHAKLVDSMIEDGLWDAFNDYHMGITAENLAEKYGLTREEQDAFAAASQQKAIAAIEGGRFRDEITPI 202          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THIL_THIVI (Acetyl-CoA acetyltransferase OS=Thiocystis violacea GN=phbA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.863e-20
Identity = 75/208 (36.06%), Postives = 104/208 (50.00%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTL-ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNS----ISVVGQ------------VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN 574
            +VIV A RTAI     GG    L A D+   VLKA+IE+T + P +V ++++G VL  G  +    R     AG P TVP  T+N+ C SGL+AV     A+  G  +I IA G ESM+ +S     S  GQ            V+   + F Q       MG+T+EN+A+++  TR+ QD                G+F DEIIPV+
Sbjct:    5 IVIVDAGRTAI--GTFGGALSALQATDIGTTVLKALIERTGIAPEQVSEVILGQVLTAGCGQN-PARQTTLMAGLPHTVPAMTINKVCGSGLKAVHLAMQAVACGDAEIVIAGGQESMSQSSHVLPRSREGQRMGDWPMKDTMIVDGLWDAFNQCH-----MGVTAENIAKKYAFTREAQDAFAAASQQKAEAAIQSGRFADEIIPVS 204          
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: THLA_STAES (Probable acetyl-CoA acyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2384 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.088e-19
Identity = 69/225 (30.67%), Postives = 115/225 (51.11%), Query Frame = 2
Query:    2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-----QVNPKVEIFTQARDCLLP------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTK-------IVDPKTGVEKRVTI 622
            +V+  AYRT I     G FKD  A +L A V++ ++E ++++P+E+ ++++G VL  G  +    R+AA + G PE VP  TVN+ C SGL+A+     +I AG  +I IA G+ESM+ + + +       ++  +    +   D L        MGIT+EN+ +++ ++R+EQD                G F  EI+PV          I+    G+  + TI
Sbjct:    4 IVLAEAYRTPI-GVFGGVFKDIPAYELGATVIRQILEHSQIDPNEINEVILGNVLQAGQGQN-PARIAAIHGGVPEAVPSFTVNKVCGSGLKAIQLAYQSIVAGDNEIVIAGGMESMSQSPMLLKNSRFGFKMGNQTLEDSMIADGLTDKFNDYHMGITAENLVEQYQISRKEQDQFAFDSQQKASRAQQAGVFDAEIVPVEVPQRKGDPLIISQDEGIRPQTTI 226          
The following BLAST results are available for this feature:
BLAST of FC876429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
THLA_STAAS1.916e-2433.78Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAN1.916e-2433.78Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAM1.916e-2433.78Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THIL_RALEH5.218e-2236.82Acetyl-CoA acetyltransferase OS=Ralstonia eutropha... [more]
THLA_CLOAB8.900e-2234.80Acetyl-CoA acetyltransferase OS=Clostridium acetob... [more]
THIK_ENCCU2.589e-2131.713-ketoacyl-CoA thiolase, peroxisomal OS=Encephalit... [more]
FADA_CHRSD5.769e-2134.553-ketoacyl-CoA thiolase OS=Chromohalobacter salexi... [more]
ATOB_PSEAE1.678e-2034.15Acetyl-CoA acetyltransferase OS=Pseudomonas aerugi... [more]
THIL_THIVI2.863e-2036.06Acetyl-CoA acetyltransferase OS=Thiocystis violace... [more]
THLA_STAES1.088e-1930.67Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank descriptionC32004F09EF DevOvary1 Citrus clementina cDNA clone C32004F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876429 ID=FC876429; Name=FC876429; organism=Citrus clementina; type=EST; length=639bp
CGTCGTAATTGTGGCTGCATACCGTACTGCAATTTGCAAGGCGAAACGTG
GAGGCTTCAAGGATACTCTTGCCGATGATCTGCTTGCACCTGTTCTGAAG
GCAGTGATAGAGAAAACGAGGTTGAATCCCAGCGAAGTAGGGGATATAGT
TGTTGGTACAGTCTTGGCACCTGGCTCAACAAGAGCCATGGAGTGTAGGA
TGGCAGCGTTCTATGCTGGTTTCCCTGAAACGGTGCCCCTCAGAACTGTC
AACAGGCAGTGTTCATCTGGCTTGCAGGCGGTTGCTGATGTTGCAACTGC
TATAAAAGCTGGATTGTATGACATTGGTATTGCTGCTGGATTGGAAAGCA
TGACTGTGAATTCTATTAGCGTTGTTGGCCAAGTTAACCCCAAAGTGGAG
ATCTTTACTCAAGCTCGGGACTGTCTTCTTCCTATGGGTATCACTTCTGA
AAATGTTGCACAAAGATTTGGTGTGACACGACAAGAGCAAGACCTGGCTG
CCATTGAATCTCATAGGCGTGCTGCTGCTGCAACTGCATCTGGCAAGTTT
AAAGATGAAATTATTCCAGTGAATACCAAGATTGTGGACCCAAAAACTGG
AGTGGAGAAGCGTGTCACAATTTCTGTGGATGATGGAAT
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