FC876429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.178e-15 Identity = 60/190 (31.58%), Postives = 96/190 (50.53%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIP 568 VVIV A RT + ++K G F+ A+DL A ++++++ + T L+ E+ DI G V R AA A P +VP TVNR C S +QA+ D A AI G ++ + G+E M ++ +P + T A+ + MG+T+E +A+ ++R+ QD G F+ EI+P Sbjct: 4 VVIVDAVRTPMGRSKGGAFRQVRAEDLSAHLMRSLLSRNTALDAREIDDIYWGCVQQALEQGFNVARNAALLAEIPVSVPATTVNRLCGSSMQALHDAARAIMVGDANVCLIGGVEHMGHVPMNHGVDFHPGLS-RTIAKAAGM-MGLTAEMLARMHNISREMQDQFAARSHQRAYHATQSGAFRHEIVP 191
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.178e-15 Identity = 64/221 (28.96%), Postives = 101/221 (45.70%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622 VVIV A RT + ++K G F++ A+DL A ++++++ + L + + DI G V R AA A P +VP TVNR C S +QA+ D A I +G + G+E M +S +P + MG+T+E +A+ G++R+ QD G FK+EIIP +++ P+T VE T+ Sbjct: 4 VVIVDAIRTPMSRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMSGDAQACLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATL 222
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14 Identity = 63/192 (32.81%), Postives = 94/192 (48.96%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN 574 VVI+ A RT + ++K G F+ A+DL A +++AVI + LN +E+ DI G V R A+ A P +VP TVNR C S +QA+ D A AI G I + G+E M ++ +P + T A+ + MG+T+E +A+ ++RQ QD G F EI+ N Sbjct: 4 VVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHMGHVPMNHGVDFHPGMG-RTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATN 193
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14 Identity = 63/192 (32.81%), Postives = 94/192 (48.96%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN 574 VVI+ A RT + ++K G F+ A+DL A +++AVI + LN +E+ DI G V R A+ A P +VP TVNR C S +QA+ D A AI G I + G+E M ++ +P + T A+ + MG+T+E +A+ ++RQ QD G F EI+ N Sbjct: 4 VVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHMGHVPMNHGVDFHPGMG-RTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATN 193
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14 Identity = 63/192 (32.81%), Postives = 94/192 (48.96%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN 574 VVI+ A RT + ++K G F+ A+DL A +++AVI + LN +E+ DI G V R A+ A P +VP TVNR C S +QA+ D A AI G I + G+E M ++ +P + T A+ + MG+T+E +A+ ++RQ QD G F EI+ N Sbjct: 4 VVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHMGHVPMNHGVDFHPGMG-RTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATN 193
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14 Identity = 63/192 (32.81%), Postives = 94/192 (48.96%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN 574 VVI+ A RT + ++K G F+ A+DL A +++AVI + LN +E+ DI G V R A+ A P +VP TVNR C S +QA+ D A AI G I + G+E M ++ +P + T A+ + MG+T+E +A+ ++RQ QD G F EI+ N Sbjct: 4 VVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHMGHVPMNHGVDFHPGMG-RTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATN 193
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_YERPA (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14 Identity = 63/192 (32.81%), Postives = 94/192 (48.96%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN 574 VVI+ A RT + ++K G F+ A+DL A +++AVI + LN +E+ DI G V R A+ A P +VP TVNR C S +QA+ D A AI G I + G+E M ++ +P + T A+ + MG+T+E +A+ ++RQ QD G F EI+ N Sbjct: 4 VVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHMGHVPMNHGVDFHPGMG-RTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATN 193
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_YERP3 (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14 Identity = 63/192 (32.81%), Postives = 94/192 (48.96%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN 574 VVI+ A RT + ++K G F+ A+DL A +++AVI + LN +E+ DI G V R A+ A P +VP TVNR C S +QA+ D A AI G I + G+E M ++ +P + T A+ + MG+T+E +A+ ++RQ QD G F EI+ N Sbjct: 4 VVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHMGHVPMNHGVDFHPGMG-RTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIVATN 193
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_MARMS (3-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain MWYL1) GN=fadA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14 Identity = 54/212 (25.47%), Postives = 99/212 (46.70%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDD 634 VVI+ A R+ + K K G F++ A++L A ++K + ++ ++ +V D++ G V R + AG P T +TVNR C S + A+ A AI G D+ + G+E M + ++ V+ + + MG+T+E + + GV+R++QD G+F +EI+ + D ++ + VD+ Sbjct: 8 VVIIDAVRSPMGKTKNGVFRNVRAENLSAALVKELFKRNPNVDQKDVEDLIWGCVNQTLEQGFNMARAVSLLAGLPITCAAQTVNRLCGSSMSAIHTAAQAIMTGQGDVFVVGGVEHM--GHVGMMHGVDVNPALSKHMAKASMMMGVTAEMLGKMHGVSREDQDAFAVRSHRLAHEATLQGRFNNEIVSIEGHDAD-----GNKILVEVDE 212
BLAST of FC876429 vs. ExPASy Swiss-Prot
Match: FADA_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.376e-14 Identity = 64/221 (28.96%), Postives = 100/221 (45.25%), Query Frame = 2 Query: 2 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVN-------------TKIVDPKTGVEKRVTI 622 VVIV A RT + ++K G F++ A+DL A ++++++ + L + + DI G V R AA A P +VP TVNR C S +QA+ D A I G + G+E M +S +P + MG+T+E +A+ G++R+ QD G FK+EIIP +++ P+T VE T+ Sbjct: 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATL 222 The following BLAST results are available for this feature:
BLAST of FC876429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876429 ID=FC876429; Name=FC876429; organism=Citrus clementina; type=EST; length=639bpback to top |