FC876430

Overview
NameFC876430
Unique NameFC876430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC876430_ssr13 microsatellite FC876430_ssr13:13..24. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig82 contig Ccv1_Contig82:145..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.256e-47
Identity = 86/158 (54.43%), Postives = 117/158 (74.05%), Query Frame = 2
Query:  218 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            GY +LRDP  NKG+AFT +ER    + GLLPP  + Q +Q   ++ +  +    L +Y+ +M L++RNE+LFYK+L  ++E  +P+VYTPTVG ACQ+YG  FRRP+GL+I++ ++G I  +LK+WPE  I+ IVVTDGERILGLGDLGC GMGIPVG
Sbjct:    4 GYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDVQVFSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQQYGLAFRRPRGLFITIHDRGHIATMLKSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 161          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 4.252e-47
Identity = 85/158 (53.80%), Postives = 117/158 (74.05%), Query Frame = 2
Query:  218 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            GY L RDP  NK LAFT +ER    + GLLPP +++Q++Q  +++ +  +      +Y+ +M+L++RNE+LFY +L+ NVE+ +P+VYTPTVG ACQ+Y   FR+P+GL+IS+ +KG I  VL  WPE  ++ IVVTDGERILGLGDLGC GMGIPVG
Sbjct:   15 GYLLTRDPHLNKDLAFTLEERQQLKIHGLLPPCIVNQEIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFYSVLMSNVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDVVKAIVVTDGERILGLGDLGCNGMGIPVG 172          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.252e-47
Identity = 84/158 (53.16%), Postives = 121/158 (76.58%), Query Frame = 2
Query:  218 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            G  L+ +PR NKG+AFT +ER    L+GLLPP + +Q +Q  +   ++++   PL+KY+ +M ++ERNE+LFY++L D++E L+P+VYTPTVG AC +YG IFRRP+GL+IS+ ++G +  ++ NWPE  ++ +VVTDGERILGLGDLG  GMGIPVG
Sbjct:   25 GKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 182          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.473e-47
Identity = 84/158 (53.16%), Postives = 121/158 (76.58%), Query Frame = 2
Query:  218 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            G  L+ +PR NKG+AFT +ER    L+GLLPP + +Q +Q  +   ++++   PL+KY+ +M ++ERNE+LFY++L D++E L+P+VYTPTVG AC +YG IFRRP+GL+IS+ ++G +  ++ NWPE  ++ +VVTDGERILGLGDLG  GMGIPVG
Sbjct:   25 GKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 182          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.110e-46
Identity = 85/158 (53.80%), Postives = 115/158 (72.78%), Query Frame = 2
Query:  218 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            GY +LRDP  NKG+AFT +ER    + GLLPP  + Q  Q   ++ +  +    L +Y+ +M L++RNE+LFYK+L  ++E  +P+VYTPTVG ACQ YG  FRRP+GL+I++ ++G I  +L++WPE  I+ IVVTDGERILGLGDLGC GMGIPVG
Sbjct:    4 GYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 161          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 8.019e-46
Identity = 84/158 (53.16%), Postives = 118/158 (74.68%), Query Frame = 2
Query:  218 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            GY + R+P  NKG+AFT +ER    + GL+PP  +SQ +Q  ++M    + +  L KY+ +M L++RNE+LFY++L  +VE+ +P+VYTPTVG ACQ YG  FRRP+GL+I++ +KG +  +L +WPE +I+ +VVTDGERILGLGDLGC GMGIPVG
Sbjct:   50 GYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVG 207          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.980e-45
Identity = 84/158 (53.16%), Postives = 116/158 (73.42%), Query Frame = 2
Query:  218 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            GY + R+P  NKG+AFT +ER    + GL+PP  +SQ +Q  ++M      +  L KY+ +M  ++RNE+LFY++L  +VE+ +P+VYTPTVG ACQ YG  FRRP+GL+I++ +KG I  +L +WPE +I+ +VVTDGERILGLGDLGC GMGIPVG
Sbjct:   50 GYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYENQQSDLDKYIILMTHQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHIATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVG 207          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45
Identity = 83/158 (52.53%), Postives = 115/158 (72.78%), Query Frame = 2
Query:  218 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            GY L R P  NK LAFT +ER    + GLLPP  ISQ +Q  +++ +  +      +Y+ +M+L++RNE+LFYK+L+ ++E+ +P+VYTPTVG ACQ+Y   FR+P+GL+IS+ ++G +  VL  WPE  I+ +VVTDGERILGLGDLGC GMGIPVG
Sbjct:    1 GYGLTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVG 158          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.789e-45
Identity = 82/158 (51.90%), Postives = 116/158 (73.42%), Query Frame = 2
Query:  218 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            GY L R+P  NK LAFT +ER    + GLLPP+  SQ++Q  +++ +         +Y+ +M+L++RNE+LFY++L  ++E+ +P+VYTPTVG ACQ+Y  +FR+P+GL+I++ ++G I  VL  WPE  I+ IVVTDGERILGLGDLGC GMGIPVG
Sbjct:   15 GYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVG 172          
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.119e-42
Identity = 80/157 (50.96%), Postives = 117/157 (74.52%), Query Frame = 2
Query:  227 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            LL++PR NKG+ F+  ER    L GLLPPA ++Q+ Q  +++  +R+    L +Y+ +  L++RNE+LFY+++ D+V+EL+P+VYTPTVG ACQ +G I+R+P+GLYI++ +    KI ++L NW E  ++ IVVTDGERILGLGDLG  G+GIPVG
Sbjct:   80 LLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVG 236          
The following BLAST results are available for this feature:
BLAST of FC876430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_ANAPL3.256e-4754.43NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAOX_RAT4.252e-4753.80NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAOM_HUMAN4.252e-4753.16NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]
MAOM_MOUSE9.473e-4753.16NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAOX_COLLI2.110e-4653.80NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAON_HUMAN8.019e-4653.16NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAON_MOUSE3.980e-4553.16NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]
MAOX_PIG5.198e-4552.53NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]
MAOX_HUMAN6.789e-4551.90NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOM_ASCSU4.119e-4250.96NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]

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Properties
Property NameValue
Genbank descriptionC32004F11EF DevOvary1 Citrus clementina cDNA clone C32004F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876430 ID=FC876430; Name=FC876430; organism=Citrus clementina; type=EST; length=699bp
GAAGGGAGTGAGTGTTTGTTTGTTTTCGTTTTTGTGAAAAGCAGAAAAAG
TAAAAAGAGTGAGAATGGAGAGCACCATGAAGGAGATGAGAGACGGAGCT
TCGGTTCTCGACTTCGACTCGAAATCCACCGTCGAAGGCGGCGTTGAAGA
CGTCTACGGTGAGGATCGTGCCACCGAGGACCAGCTCGTCACTCCCTGGA
CCATCTCTGTTGCCAGCGGGTACTGTTTGTTGAGGGATCCACGCCATAAC
AAAGGGCTTGCTTTCACTGAGAAAGAGAGGGATGCCCACTACTTGCGCGG
CCTTTTGCCTCCAGCTGTTATAAGTCAACAACTTCAGGAGAAGAAATTGA
TGAACAGCATCAGACAATATGAAGTTCCGCTGCAAAAATATGTGGCCATG
ATGGAACTTGAGGAGAGAAATGAAAGACTGTTCTATAAGCTACTGATTGA
TAATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCAACTGTTGGTGAAG
CTTGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCAGGGTCTATACATA
AGTCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCCTGA
AAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAGCGCATTTTGGGAC
TTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGTTGGGAATTGGCT
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