FC876430

Overview
NameFC876430
Unique NameFC876430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC876430_ssr13 microsatellite FC876430_ssr13:13..24. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig82 contig Ccv1_Contig82:145..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB2 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS223) GN=sfcA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 68/159 (42.77%), Postives = 107/159 (67.30%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIG 171
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34
Identity = 68/159 (42.77%), Postives = 112/159 (70.44%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+++ER+   L GLLP  + + + Q  +    +  ++  L K++ +  +++ NE LF+ L+ +++EE++P++YTPTVG AC+++  I+RR +GL++S  E+ KI ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   12 AGPALLESPLLNKGSAFSQEERNNFNLTGLLPHNIETIESQSTRAYQQLSSFKSDLDKHIYLRNIQDTNETLFHHLIENHLEEVMPLIYTPTVGLACEQFSKIYRRKRGLFVSYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIG 170
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_VIBPA (NAD-dependent malic enzyme OS=Vibrio parahaemolyticus GN=sfcA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.128e-34
Identity = 67/159 (42.14%), Postives = 107/159 (67.30%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  L+  P  NKG AF+ +ER +  L GLLP    + Q Q ++     + +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPALMATPLLNKGSAFSAEERSSFNLEGLLPETTETIQEQVERAYQQYKSFESDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYPNRDRIDDLLNNAANHNVKVIVVTDGERILGLGDQGIGGMGIPIG 171
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SALG2 (NAD-dependent malic enzyme OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sfcA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.128e-34
Identity = 70/159 (44.03%), Postives = 109/159 (68.55%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPVLLEFPLLNKGSAFSAEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIG 174
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO12_VIBVY (NAD-dependent malic enzyme 2 OS=Vibrio vulnificus (strain YJ016) GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.128e-34
Identity = 67/159 (42.14%), Postives = 106/159 (66.67%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AFT +ER    L GLLP  + +   Q  +       +   ++K++ +  +++ NE L+++L+  ++EE++P++YTPTVGEACQK+  I+RR +GL++S +++ ++  +L N P   ++VIV+TDGERILGLGD G  GMGIP+G
Sbjct:   10 AGNTLLNTPLLNKGSAFTLEERKNFNLIGLLPANIETIDEQVSRAYEQFSLFNSAMEKHIYLRNIQDTNETLYFRLINQHIEEMMPIIYTPTVGEACQKFSQIYRRNRGLFLSFEDQDELEAILNNAPNTHVKVIVITDGERILGLGDQGIGGMGIPIG 168
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.128e-34
Identity = 68/159 (42.77%), Postives = 110/159 (69.18%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+ +ER    L GLLP A+ S + Q ++     ++++  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N   ++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPALLETPLLNKGSAFSIEERMFFNLEGLLPEAIESIEEQTERAYQQYQKFDKDMDKHIYLRNIQDTNETLFYRLVENHITEMMPIIYTPTVGAACEDFSNIYRRGRGLFISYPNRDRIEDMLNNASRQNVKVIVVTDGERILGLGDQGIGGMGIPIG 171
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.392e-34
Identity = 70/159 (44.03%), Postives = 109/159 (68.55%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIG 174
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.392e-34
Identity = 70/159 (44.03%), Postives = 109/159 (68.55%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIG 174
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.392e-34
Identity = 70/159 (44.03%), Postives = 109/159 (68.55%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIG 174
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SALPB (NAD-dependent malic enzyme OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.392e-34
Identity = 70/159 (44.03%), Postives = 109/159 (68.55%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIG 174
The following BLAST results are available for this feature:
BLAST of FC876430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHEB23.161e-3442.77NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_PSYIN3.161e-3442.77NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]
MAO1_VIBPA4.128e-3442.14NAD-dependent malic enzyme OS=Vibrio parahaemolyti... [more]
MAO1_SALG24.128e-3444.03NAD-dependent malic enzyme OS=Salmonella gallinaru... [more]
MAO12_VIBVY4.128e-3442.14NAD-dependent malic enzyme 2 OS=Vibrio vulnificus ... [more]
MAO11_PHOPR4.128e-3442.77NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]
MAO1_SALTY5.392e-3444.03NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI5.392e-3444.03NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]
MAO1_SALSV5.392e-3444.03NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]
MAO1_SALPB5.392e-3444.03NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]

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Properties
Property NameValue
Genbank descriptionC32004F11EF DevOvary1 Citrus clementina cDNA clone C32004F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876430 ID=FC876430; Name=FC876430; organism=Citrus clementina; type=EST; length=699bp
GAAGGGAGTGAGTGTTTGTTTGTTTTCGTTTTTGTGAAAAGCAGAAAAAG
TAAAAAGAGTGAGAATGGAGAGCACCATGAAGGAGATGAGAGACGGAGCT
TCGGTTCTCGACTTCGACTCGAAATCCACCGTCGAAGGCGGCGTTGAAGA
CGTCTACGGTGAGGATCGTGCCACCGAGGACCAGCTCGTCACTCCCTGGA
CCATCTCTGTTGCCAGCGGGTACTGTTTGTTGAGGGATCCACGCCATAAC
AAAGGGCTTGCTTTCACTGAGAAAGAGAGGGATGCCCACTACTTGCGCGG
CCTTTTGCCTCCAGCTGTTATAAGTCAACAACTTCAGGAGAAGAAATTGA
TGAACAGCATCAGACAATATGAAGTTCCGCTGCAAAAATATGTGGCCATG
ATGGAACTTGAGGAGAGAAATGAAAGACTGTTCTATAAGCTACTGATTGA
TAATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCAACTGTTGGTGAAG
CTTGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCAGGGTCTATACATA
AGTCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCCTGA
AAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAGCGCATTTTGGGAC
TTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGTTGGGAATTGGCT
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