FC876430

Overview
NameFC876430
Unique NameFC876430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC876430_ssr13 microsatellite FC876430_ssr13:13..24. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig82 contig Ccv1_Contig82:145..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_YERPB (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=sfcA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.197e-34
Identity = 71/159 (44.65%), Postives = 108/159 (67.92%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AFT  ER+   L GLLP AV + + Q ++     + ++    K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIG 174
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_YERPA (NAD-dependent malic enzyme OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=sfcA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.197e-34
Identity = 71/159 (44.65%), Postives = 108/159 (67.92%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AFT  ER+   L GLLP AV + + Q ++     + ++    K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIG 174
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_YERP3 (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=sfcA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.197e-34
Identity = 71/159 (44.65%), Postives = 108/159 (67.92%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AFT  ER+   L GLLP AV + + Q ++     + ++    K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIG 174
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_YERE8 (NAD-dependent malic enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=sfcA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 71/159 (44.65%), Postives = 107/159 (67.30%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AFT  ER    L GLLP AV + + Q ++     + ++    K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERSHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIG 174
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_VIBVU (NAD-dependent malic enzyme OS=Vibrio vulnificus GN=sfcA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 67/159 (42.14%), Postives = 107/159 (67.30%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+ +ER +  L GLLP    + Q Q ++     + +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL++S   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPALLSTPLLNKGSAFSAEERISFNLEGLLPETTETIQEQVERAYMQYKAFESDMDKHIYLRNIQDTNETLFYRLVQNHITEMMPIIYTPTVGAACENFSNIYRRGRGLFVSYANRDRIDDILNNASNHNVKVIVVTDGERILGLGDQGIGGMGIPIG 171
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SHESR (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 67/159 (42.14%), Postives = 107/159 (67.30%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIG 171
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SHESM (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 67/159 (42.14%), Postives = 107/159 (67.30%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIG 171
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SHESA (NAD-dependent malic enzyme OS=Shewanella sp. (strain ANA-3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 67/159 (42.14%), Postives = 107/159 (67.30%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIG 171
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_SHEON (NAD-dependent malic enzyme OS=Shewanella oneidensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 67/159 (42.14%), Postives = 107/159 (67.30%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+G
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIG 171
[Close]
BLAST of FC876430 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 69/159 (43.40%), Postives = 110/159 (69.18%), Query Frame = 2 
Query:  215 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 691
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+G
Sbjct:   16 AGPVLLEFPLLNKGSAFSIEERRNFNLLGLLPEVVESIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLDEMMPVIYTPTVGAACERFSEIYRRARGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIG 174
The following BLAST results are available for this feature:
BLAST of FC876430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_YERPB9.197e-3444.65NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERPA9.197e-3444.65NAD-dependent malic enzyme OS=Yersinia pestis bv. ... [more]
MAO1_YERP39.197e-3444.65NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERE81.201e-3344.65NAD-dependent malic enzyme OS=Yersinia enterocolit... [more]
MAO1_VIBVU1.201e-3342.14NAD-dependent malic enzyme OS=Vibrio vulnificus GN... [more]
MAO1_SHESR1.201e-3342.14NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHESM1.201e-3342.14NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHESA1.201e-3342.14NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEON1.201e-3342.14NAD-dependent malic enzyme OS=Shewanella oneidensi... [more]
MAO1_CITK81.201e-3343.40NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]

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Properties
Property NameValue
Genbank descriptionC32004F11EF DevOvary1 Citrus clementina cDNA clone C32004F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876430 ID=FC876430; Name=FC876430; organism=Citrus clementina; type=EST; length=699bp
GAAGGGAGTGAGTGTTTGTTTGTTTTCGTTTTTGTGAAAAGCAGAAAAAG
TAAAAAGAGTGAGAATGGAGAGCACCATGAAGGAGATGAGAGACGGAGCT
TCGGTTCTCGACTTCGACTCGAAATCCACCGTCGAAGGCGGCGTTGAAGA
CGTCTACGGTGAGGATCGTGCCACCGAGGACCAGCTCGTCACTCCCTGGA
CCATCTCTGTTGCCAGCGGGTACTGTTTGTTGAGGGATCCACGCCATAAC
AAAGGGCTTGCTTTCACTGAGAAAGAGAGGGATGCCCACTACTTGCGCGG
CCTTTTGCCTCCAGCTGTTATAAGTCAACAACTTCAGGAGAAGAAATTGA
TGAACAGCATCAGACAATATGAAGTTCCGCTGCAAAAATATGTGGCCATG
ATGGAACTTGAGGAGAGAAATGAAAGACTGTTCTATAAGCTACTGATTGA
TAATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCAACTGTTGGTGAAG
CTTGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCAGGGTCTATACATA
AGTCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCCTGA
AAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAGCGCATTTTGGGAC
TTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGTTGGGAATTGGCT
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