FC876435

Overview
NameFC876435
Unique NameFC876435
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10210 contig Ccv1_Contig10210:13..753. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876435 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 2
Query:  350 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKA-------FQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 676
            G+G+LG+++AFG  +  + Y   GISGGH NPAV+ GL +A +V     V Y++AQ  GAI    ++         FQ   +   G G +    GYS    L  E++ TF  +  +
Sbjct:   33 GIGLLGVSFAFGLTVLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHS-PGGYSLTAALVTEVVMTFFFLIII 147          
BLAST of FC876435 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 50/155 (32.26%), Postives = 73/155 (47.10%), Query Frame = 2
Query:  212 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 676
            E+   +F +A+ AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+VAQ +GAI+G G++         R     N L +  + G  +  E+I TF L   +
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPG-NARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCI 146          
BLAST of FC876435 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12
Identity = 54/149 (36.24%), Postives = 72/149 (48.32%), Query Frame = 2
Query:  236 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVK--AFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 676
            +A +AEFIA            I Y   T    N       G++ IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  + Y +AQ LGA     L+K     K+  T    G +EL        G+  EI+ TF LVYTV
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLT----NGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVAGISELE-------GVVMEIVITFALVYTV 156          
BLAST of FC876435 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12
Identity = 47/114 (41.23%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  350 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGT--FVLV 667
            G+G LG+A AFG  +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T  F+++
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIII 146          
BLAST of FC876435 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12
Identity = 47/114 (41.23%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  350 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGT--FVLV 667
            G+G LG+A AFG  +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T  F+++
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIII 146          
BLAST of FC876435 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12
Identity = 47/114 (41.23%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  350 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGT--FVLV 667
            G+G LG+A AFG  +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T  F+++
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIII 146          
BLAST of FC876435 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12
Identity = 52/155 (33.55%), Postives = 72/155 (46.45%), Query Frame = 2
Query:  212 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 676
            EL   SF+RA+ AEF A            +G   +  P         + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ YMVAQ LGA++G  ++ +       R     N L  G S G     EI  T   V  +
Sbjct:    3 ELRSASFWRAICAEFFASLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCI 145          
BLAST of FC876435 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12
Identity = 36/116 (31.03%), Postives = 62/116 (53.45%), Query Frame = 2
Query:  350 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLV-------KAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 676
            G+G+LG+A+AFG  +  + +    ISG H+NPAV+FGL +  +      + Y++AQ +GAI   G++         F+ S      G A+    GY+ G G  +E++ T + +  +
Sbjct:   34 GIGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVI 149          
BLAST of FC876435 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12
Identity = 44/120 (36.67%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  350 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYGGGANELAD----GYSTGVGLAAEIIGT--FVLVYTVSRH 685
            G+G+LG+++AFG  +  + Y   GISGGH NPAV+ GL +A ++     V Y++AQ  GAI+   +  V A  K+ +   G  AN   +    GYS    L  E++ T  F+L+   S H
Sbjct:   33 GIGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGSTH 152          
BLAST of FC876435 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12
Identity = 48/155 (30.97%), Postives = 74/155 (47.74%), Query Frame = 2
Query:  212 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 676
            E+   +F++A+ AEF+A            + + S               IL I+ AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+ AQ +GAI+G G++  +      R     N L +  + G  +  E+I TF L   +
Sbjct:    4 EVCSLAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL-YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCI 146          
The following BLAST results are available for this feature:
BLAST of FC876435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
AQPZ2_RHIME1.686e-1234.48Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
AQP5_PIG1.686e-1232.26Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
TIP21_ORYSJ3.756e-1236.24Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
AQPZ_BRUME3.756e-1241.23Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQPZ_BRUAB3.756e-1241.23Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA23.756e-1241.23Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
MIP_BOVIN4.906e-1233.55Lens fiber major intrinsic protein OS=Bos taurus G... [more]
AQPZ_PSEPK4.906e-1231.03Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
AQPZ1_RHIME4.906e-1236.67Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
AQP5_RAT4.906e-1230.97Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32004G04EF DevOvary1 Citrus clementina cDNA clone C32004G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876435 ID=FC876435; Name=FC876435; organism=Citrus clementina; type=EST; length=741bp
GATCCAAAACAACCAAAAAAAAAAAAGAAAAAGAAAAAGGCTTCTCTCTC
GTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTCTCTCCAA
ATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTGGCAGAGCA
CGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGAGCCGCTAT
TCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCTTGATAGCT
GAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTCTTGACTGTCAT
TGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCTGTGCCG
GCGTCGGCATCCTCGGTATCGCCTGGGCCTTCGGTGGCATGATCTTTGTC
CTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCCGGCAGT
GACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTGCTGTGA
TGTACATGGTGGCGCAGTGCCTTGGTGCAATCTCCGGTGTTGGGTTGGTC
AAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGCCAACGA
GCTGGCCGATGGGTACAGCACAGGCGTTGGATTGGCCGCCGAGATCATCG
GCACCTTTGTGTTGGTTTACACTGTCTCTCGGCACTGATCCCAGAGAGCG
CAGAGACTCCCATGTCCCGTTTGCACGCTCCCCATGATTGC
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