FC876438
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_RHOE4 (S-adenosylmethionine synthetase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=metK PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.309e-30 Identity = 70/128 (54.69%), Postives = 83/128 (64.84%), Query Frame = 2
Query: 92 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV-HGHLSK----RPEEI---GAGDSG 451
LFTSESV EGHPDK+CD ISD+ILDA L QDP ++VA ET T V V GE+TT A + KIVRDT IG+ S G D ++C V V I QSP+IAQGV H H ++ +EI GAGD G
Sbjct: 8 LFTSESVTEGHPDKICDAISDSILDALLTQDPRARVAVETLVTTGQVHVAGEVTTTAYADIPKIVRDTVLEIGYDSSAKGFDGNSCGVNVAIGAQSPEIAQGVDHSHEARVDGISDDEIDRQGAGDQG 135 HSP 2 Score: 27.7202 bits (60), Expect = 3.309e-30 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query: 447 QGHMFGYATDETPEFI 494
QG MFGYAT +TPE +
Sbjct: 134 QGLMFGYATTDTPELM 149 HSP 3 Score: 25.409 bits (54), Expect = 3.309e-30 Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 1
Query: 511 LATQLGAKLTEVRKNGTCTWMR 576
LA +L +LTEVRK+G ++R
Sbjct: 155 LAHRLSRRLTEVRKSGVLPYLR 176
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_PSEPF (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf0-1) GN=metK PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.311e-30 Identity = 68/123 (55.28%), Postives = 85/123 (69.11%), Query Frame = 2
Query: 83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
E LFTSESV+EGHPDK+ DQISDA+LDA + QD ++VA ET KT + +V GE+TT A V+ E+IVRD +IG+ S DVG D C V+ I +QSPDI QGV +PE+ GAGD G
Sbjct: 3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQGAGDQG 122 HSP 2 Score: 23.0978 bits (48), Expect = 3.311e-30 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 447 QGHMFGYATDET 482
QG MFGYA++ET
Sbjct: 121 QGLMFGYASNET 132 HSP 3 Score: 20.7866 bits (42), Expect = 3.311e-30 Identity = 8/19 (42.11%), Postives = 11/19 (57.89%), Query Frame = 1
Query: 520 QLGAKLTEVRKNGTCTWMR 576
QL + E RK+G W+R
Sbjct: 145 QLVQRQAEARKSGLLPWLR 163
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_PSEF5 (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metK PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.311e-30 Identity = 68/123 (55.28%), Postives = 85/123 (69.11%), Query Frame = 2
Query: 83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
E LFTSESV+EGHPDK+ DQISDA+LDA + QD ++VA ET KT + +V GE+TT A V+ E+IVRD +IG+ S DVG D C V+ I +QSPDI QGV +PE+ GAGD G
Sbjct: 3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQGAGDQG 122 HSP 2 Score: 23.0978 bits (48), Expect = 3.311e-30 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3
Query: 447 QGHMFGYATDET 482
QG MFGYA++ET
Sbjct: 121 QGLMFGYASNET 132 HSP 3 Score: 20.7866 bits (42), Expect = 3.311e-30 Identity = 8/19 (42.11%), Postives = 11/19 (57.89%), Query Frame = 1
Query: 520 QLGAKLTEVRKNGTCTWMR 576
QL + E RK+G W+R
Sbjct: 145 QLVQRQAEARKSGLLPWLR 163
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_AZOVD (S-adenosylmethionine synthetase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=metK PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.311e-30 Identity = 64/123 (52.03%), Postives = 84/123 (68.29%), Query Frame = 2
Query: 83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
E LFTSESV+EGHPDK+ DQISDA+LDA + +D ++VACET KT + +V GEITT A ++ E++VR +IG+ S DVG D C ++ I +QS DI QGV +PE+ GAGD G
Sbjct: 3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAEDKHARVACETLVKTGVAIVAGEITTSAWIDLEELVRKVIVDIGYDSSDVGYDGHTCGIINIIGKQSVDINQGVD---RAKPEDQGAGDQG 122 HSP 2 Score: 28.4906 bits (62), Expect = 3.311e-30 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 3
Query: 447 QGHMFGYATDETPEFIASESCSCH 518
QG MFGYA+DET + + C H
Sbjct: 121 QGLMFGYASDETEVLMPAPICFSH 144 HSP 3 Score: 21.1718 bits (43), Expect = 3.311e-30 Identity = 8/19 (42.11%), Postives = 12/19 (63.16%), Query Frame = 1
Query: 520 QLGAKLTEVRKNGTCTWMR 576
+L + TE RK+G W+R
Sbjct: 145 RLVERQTEARKSGLLPWLR 163
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_STRS7 (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=metK PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.713e-30 Identity = 68/129 (52.71%), Postives = 85/129 (65.89%), Query Frame = 2
Query: 83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDSG 451
E LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ETC T V VFGEI+T A V+ ++VRDT IG+ + G A++ V + +QSPDIAQGV+ L R + IGAGD G
Sbjct: 3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETCVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEAREGQSDDFNVIGAGDQG 131 HSP 2 Score: 27.7202 bits (60), Expect = 3.713e-30 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query: 447 QGHMFGYATDETPEFI 494
QG MFG+A DETPE +
Sbjct: 130 QGLMFGFAIDETPELM 145
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_STREM (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=metK PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.713e-30 Identity = 68/129 (52.71%), Postives = 85/129 (65.89%), Query Frame = 2
Query: 83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDSG 451
E LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ETC T V VFGEI+T A V+ ++VRDT IG+ + G A++ V + +QSPDIAQGV+ L R + IGAGD G
Sbjct: 3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETCVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEAREGQSDDFNVIGAGDQG 131 HSP 2 Score: 27.7202 bits (60), Expect = 3.713e-30 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query: 447 QGHMFGYATDETPEFI 494
QG MFG+A DETPE +
Sbjct: 130 QGLMFGFAIDETPELM 145
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_STRE4 (S-adenosylmethionine synthetase OS=Streptococcus equi subsp. equi (strain 4047) GN=metK PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.713e-30 Identity = 68/129 (52.71%), Postives = 85/129 (65.89%), Query Frame = 2
Query: 83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDSG 451
E LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ETC T V VFGEI+T A V+ ++VRDT IG+ + G A++ V + +QSPDIAQGV+ L R + IGAGD G
Sbjct: 3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETCVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEAREGQSDDFNAIGAGDQG 131 HSP 2 Score: 27.7202 bits (60), Expect = 3.713e-30 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query: 447 QGHMFGYATDETPEFI 494
QG MFG+A DETPE +
Sbjct: 130 QGLMFGFAIDETPELM 145
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_PSEPK (S-adenosylmethionine synthetase OS=Pseudomonas putida (strain KT2440) GN=metK PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.714e-30 Identity = 66/123 (53.66%), Postives = 84/123 (68.29%), Query Frame = 2
Query: 83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
E LFTSESV+EGHPDK+ DQISDA+LDA + QD ++VACET KT + ++ GE+TT A V+ E +VR +IG+ S DVG D C V+ I +QS DIAQGV +PE+ GAGD G
Sbjct: 3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKYARVACETLVKTGVAIIAGEVTTSAWVDLEDLVRKVIIDIGYNSSDVGFDGATCAVMNIIGKQSVDIAQGVD---RSKPEDQGAGDQG 122 HSP 2 Score: 26.5646 bits (57), Expect = 3.714e-30 Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 3
Query: 447 QGHMFGYATDETPEFIASESCSCH 518
QG MFGYA++ET + + C H
Sbjct: 121 QGLMFGYASNETEVLMPAPICFSH 144
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_PSEPG (S-adenosylmethionine synthetase OS=Pseudomonas putida (strain GB-1) GN=metK PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.714e-30 Identity = 66/123 (53.66%), Postives = 84/123 (68.29%), Query Frame = 2
Query: 83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
E LFTSESV+EGHPDK+ DQISDA+LDA + QD ++VACET KT + ++ GE+TT A V+ E +VR +IG+ S DVG D C V+ I +QS DIAQGV +PE+ GAGD G
Sbjct: 3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKYARVACETLVKTGVAIIAGEVTTSAWVDLEDLVRKVIIDIGYNSSDVGFDGATCAVMNIIGKQSVDIAQGVD---RSKPEDQGAGDQG 122 HSP 2 Score: 26.5646 bits (57), Expect = 3.714e-30 Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 3
Query: 447 QGHMFGYATDETPEFIASESCSCH 518
QG MFGYA++ET + + C H
Sbjct: 121 QGLMFGYASNETEVLMPAPICFSH 144
BLAST of FC876438 vs. ExPASy Swiss-Prot
Match: METK_PSEP1 (S-adenosylmethionine synthetase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=metK PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.714e-30 Identity = 66/123 (53.66%), Postives = 84/123 (68.29%), Query Frame = 2
Query: 83 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDSG 451
E LFTSESV+EGHPDK+ DQISDA+LDA + QD ++VACET KT + ++ GE+TT A V+ E +VR +IG+ S DVG D C V+ I +QS DIAQGV +PE+ GAGD G
Sbjct: 3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAQDKYARVACETLVKTGVAIIAGEVTTSAWVDLEDLVRKVIIDIGYNSSDVGFDGATCAVMNIIGKQSVDIAQGVD---RSKPEDQGAGDQG 122 HSP 2 Score: 26.5646 bits (57), Expect = 3.714e-30 Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 3
Query: 447 QGHMFGYATDETPEFIASESCSCH 518
QG MFGYA++ET + + C H
Sbjct: 121 QGLMFGYASNETEVLMPAPICFSH 144 The following BLAST results are available for this feature:
BLAST of FC876438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876438 ID=FC876438; Name=FC876438; organism=Citrus clementina; type=EST; length=576bpback to top |