FC876441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPQ_CANAL (T-complex protein 1 subunit theta OS=Candida albicans GN=CCT8 PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 8.565e-19 Identity = 46/127 (36.22%), Postives = 82/127 (64.57%), Query Frame = 2 Query: 167 NVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL-ERIAQKFEFGLNDL 544 NV A + +A IL TS+GP G +K++ + G ITND AT+L ++++ + + K++++ S+ Q++E+GD T V+++AG L AEKLL G++ I +G+ +A++ ++ L E + +K E DL Sbjct: 31 NVEAVREIASILLTSMGPSGRNKIIVNKLGKKFITNDAATMLNELEIVHPVVKILIQASKQQEFEMGDNTNLVIILAGEFLNVAEKLLTLGLNVSEIIQGFNLANKFVMKTLDELVVEKVESFETDL 157
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPQ_CAEEL (T-complex protein 1 subunit theta OS=Caenorhabditis elegans GN=Y55F3AR.3 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.119e-18 Identity = 50/156 (32.05%), Postives = 91/156 (58.33%), Query Frame = 2 Query: 122 QEEKSRLRGPD-AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSK 586 +E +G D A + N+ A +A +R++ GP GM+KM+ + + +TND ATIL+++++ + A++++ + Q+ +IGD T VV++A +LLE A L+ G+ P +A GYE A+ A+E L + K + ++E + Q + + SK Sbjct: 15 KEGAQHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTLVVKEATDMKNIEEVRQYIRSAITSK 170
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPG_PIG (T-complex protein 1 subunit gamma (Fragment) OS=Sus scrofa GN=CCT3 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.237e-17 Identity = 42/82 (51.22%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 173 SAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQA 418 +A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+GDGTT V+++AG +L A Sbjct: 1 NAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVA 82
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPH_ENCCU (T-complex protein 1 subunit eta OS=Encephalitozoon cuniculi GN=CCT7 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17 Identity = 49/139 (35.25%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 164 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLN 580 +NV +A L ++LGP GMDK+ + + +TNDGATIL+ M++ + + +L+V LS SQD E+GDGTT VV++ +L + L++ I E + +EHLE++ + + + L L TC+T+ N Sbjct: 23 SNVDVCTKIAEFLESTLGPYGMDKLFAGKE--IVVTNDGATILKHMNIRHPVGRLLVALSESQDSEVGDGTTSVVILTTEILSCLKPLIKDNFDLGCIKGCLEELRMMCIEHLEKMGMELDDEV--LYKLAGTCITSKN 157
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPQ_YEAST (T-complex protein 1 subunit theta OS=Saccharomyces cerevisiae GN=CCT8 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.017e-17 Identity = 43/140 (30.71%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 167 NVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSK 586 +++A + + ++ TS+GP G +K++ + G + ITND AT+L ++D+ + K++V + Q ++GDGT V+++AG LL +EKL+ G+ + I +GY MA + ++ L+ + ND L++ ++SK Sbjct: 31 SIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSK 170
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPH_TETTH (T-complex protein 1 subunit eta (Fragment) OS=Tetrahymena thermophila PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16 Identity = 44/111 (39.64%), Postives = 74/111 (66.67%), Query Frame = 2 Query: 272 NDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLER----IAQKFEFGLNDLEPLVQTCMTTLNSKMV 592 NDGATIL +D+ + AK +V+++++QD E+GDGTT V ++AG LL++++ +E G+HP I +GY+ A ++A++ L +A K E E L++ T+LNSK++ Sbjct: 1 NDGATILNLLDIVHPAAKTLVDIAKAQDDEVGDGTTSVCLLAGELLKESKYFIEEGMHPQIITKGYKEALKLALQFLHENAHSVADKNE--TEKREMLIKCAQTSLNSKLL 109
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPZ_PIG (T-complex protein 1 subunit zeta (Fragment) OS=Sus scrofa GN=CCT6 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.787e-16 Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 2 Query: 155 AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHP 448 A N+SA + + +LRT+LGPKG KML S GD+ +T DG +L +M + + A L+ +++ +QD GDG T V++ G LL+QA+ + G+HP Sbjct: 4 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGXTSNVLIIGELLKQADLYISEGLHP 101
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_LACZE (60 kDa chaperonin OS=Lactobacillus zeae GN=groL PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 520 DA+ A + +A ++T+LGPKG + +L G ITNDG TI + +D++ N AKL+ E++ + GDGTT V+A S++ + K + G +P+ I G E A++ AV+ L +I+ K Sbjct: 10 DARAAMLRGVDQLANTVKTTLGPKGRNVVLDKSYGSPEITNDGVTIAKSIDLEDHYENMGAKLVAEVASKTNDIAGDGTTTATVLAQSIIREGMKNVTAGANPVGIRTGIEKATKAAVDELHKISHK 136
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_LACCB (60 kDa chaperonin OS=Lactobacillus casei (strain BL23) GN=groL PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 520 DA+ A + +A ++T+LGPKG + +L G ITNDG TI + +D++ N AKL+ E++ + GDGTT V+A S++ + K + G +P+ I G E A++ AV+ L +I+ K Sbjct: 10 DARAAMLRGVDQLANTVKTTLGPKGRNVVLDKSYGSPEITNDGVTIAKSIDLEDHYENMGAKLVAEVASKTNDIAGDGTTTATVLAQSIIREGMKNVTAGANPVGIRTGIEKATKAAVDELHKISHK 136
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_LACC3 (60 kDa chaperonin OS=Lactobacillus casei (strain ATCC 334) GN=groL PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 520 DA+ A + +A ++T+LGPKG + +L G ITNDG TI + +D++ N AKL+ E++ + GDGTT V+A S++ + K + G +P+ I G E A++ AV+ L +I+ K Sbjct: 10 DARAAMLRGVDQLANTVKTTLGPKGRNVVLDKSYGSPEITNDGVTIAKSIDLEDHYENMGAKLVAEVASKTNDIAGDGTTTATVLAQSIIREGMKNVTAGANPVGIRTGIEKATKAAVDELHKISHK 136 The following BLAST results are available for this feature:
BLAST of FC876441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 430
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876441 ID=FC876441; Name=FC876441; organism=Citrus clementina; type=EST; length=616bpback to top |