FC876441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_BACP2 (60 kDa chaperonin OS=Bacillus pumilus (strain SAFR-032) GN=groL PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13 Identity = 41/129 (31.78%), Postives = 77/129 (59.69%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 526 +A++A + A+A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++ + K + G +P+ + +G E A ++A+E L I++ E Sbjct: 10 EARRAMLRGVDALADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPVGVRKGIEEAVKVALEGLHEISKPIE 138
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_STAES (60 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=groL PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13 Identity = 41/129 (31.78%), Postives = 76/129 (58.91%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 526 DA++A + +A ++ ++GPKG + +L ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A S++++ K + G +P+ + +G + A ++A+E L I+QK E Sbjct: 10 DARQAMLRGVDKLANAVKVTIGPKGRNVVLDKDYTTPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQSMIQEGLKNVTSGANPVGLRQGIDKAVQVAIEALHEISQKVE 138
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_STAEQ (60 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=groL PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13 Identity = 41/129 (31.78%), Postives = 76/129 (58.91%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 526 DA++A + +A ++ ++GPKG + +L ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A S++++ K + G +P+ + +G + A ++A+E L I+QK E Sbjct: 10 DARQAMLRGVDKLANAVKVTIGPKGRNVVLDKDYTTPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQSMIQEGLKNVTSGANPVGLRQGIDKAVQVAIEALHEISQKVE 138
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_STAEP (60 kDa chaperonin OS=Staphylococcus epidermidis GN=groL PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13 Identity = 41/129 (31.78%), Postives = 76/129 (58.91%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 526 DA++A + +A ++ ++GPKG + +L ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A S++++ K + G +P+ + +G + A ++A+E L I+QK E Sbjct: 10 DARQAMLRGVDKLANAVKVTIGPKGRNVVLDKDYTTPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQSMIQEGLKNVTSGANPVGLRQGIDKAVQVAIEALHEISQKVE 138
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_LISW6 (60 kDa chaperonin OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 41/129 (31.78%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 526 DA++A + +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++++ K + G +P+ + G E A A+E L+ I++ E Sbjct: 10 DARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIE 138
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_LISMO (60 kDa chaperonin OS=Listeria monocytogenes GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 41/129 (31.78%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 526 DA++A + +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++++ K + G +P+ + G E A A+E L+ I++ E Sbjct: 10 DARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIE 138
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_LISMH (60 kDa chaperonin OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 41/129 (31.78%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 526 DA++A + +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++++ K + G +P+ + G E A A+E L+ I++ E Sbjct: 10 DARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIE 138
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_LISMF (60 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain F2365) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 41/129 (31.78%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 526 DA++A + +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++++ K + G +P+ + G E A A+E L+ I++ E Sbjct: 10 DARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIE 138
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_LISMC (60 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 41/129 (31.78%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 526 DA++A + +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++++ K + G +P+ + G E A A+E L+ I++ E Sbjct: 10 DARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIE 138
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: CH60_LISIN (60 kDa chaperonin OS=Listeria innocua GN=groL PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 41/129 (31.78%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 526 DA++A + +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++++ K + G +P+ + G E A A+E L+ I++ E Sbjct: 10 DARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIE 138 The following BLAST results are available for this feature:
BLAST of FC876441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 430
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876441 ID=FC876441; Name=FC876441; organism=Citrus clementina; type=EST; length=616bpback to top |