FC876441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.904e-36 Identity = 82/174 (47.13%), Postives = 117/174 (67.24%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ ITNDGATIL++MD+ + AK+MVE++++QD E GDGTT VV+AG LL++AE+LL++ IHP I +GY +AS+ A E L+ IA+ E +D E L++ MT + K + LA Sbjct: 6 GQPILIL--PEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYTLASQKAQEILDSIAK--EVKPDDEEVLLKAAMTAITGKAAEEEREYLA 175
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 5.904e-36 Identity = 79/151 (52.32%), Postives = 111/151 (73.51%), Query Frame = 2 Query: 164 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 +N+SA KAVA +RTSLGPKGMDKM+Q GDVTITNDGATIL+QM V + A+++VELS++QD E GDGTT VV++AGSLL+ KLL++GIHP I+E ++ A +E L +++ + L+D E L+ + T+LNSK+V++ L+ Sbjct: 36 SNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQ--LSDRETLLNSATTSLNSKVVSQYSSLLS 184
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 5.904e-36 Identity = 79/151 (52.32%), Postives = 111/151 (73.51%), Query Frame = 2 Query: 164 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 +N+SA KAVA +RTSLGPKGMDKM+Q GDVTITNDGATIL+QM V + A+++VELS++QD E GDGTT VV++AGSLL+ KLL++GIHP I+E ++ A +E L +++ + L+D E L+ + T+LNSK+V++ L+ Sbjct: 36 SNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQ--LSDRETLLNSATTSLNSKVVSQYSSLLS 184
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 7.711e-36 Identity = 80/162 (49.38%), Postives = 116/162 (71.60%), Query Frame = 2 Query: 131 KSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 K+R + + +KAN+ A +AVA +RTSLGPKGMDKM+++ GD+ I+NDG TIL+QM + + +AK++VE+S +QD E GDGTT VV+M G+LL AEKLL +GIHP IAE ++ A+ +VE L ++ K L+D E LV+ T+L+SK+V++ LA Sbjct: 14 KNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTSRGDIIISNDGHTILKQMAILHPVAKMLVEVSGAQDVEAGDGTTSVVIMTGALLGAAEKLLNKGIHPTIIAESFQRAAERSVEILLNMSTK--ISLDDKEALVRAASTSLSSKIVSQHSSFLA 173
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.930e-35 Identity = 80/174 (45.98%), Postives = 116/174 (66.67%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ ITNDGATIL++MD+ + AK+MVE++++QD E GDGTT VV+AG LL++AE+LL++ IHP + +GY +A+ A E L+ IA+ E +D E L++ MT + K + LA Sbjct: 6 GQPILIL--PEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIVIKGYMLAAEKAQEILDSIAK--EVKPDDEEVLLKAAMTAITGKAAEEEREYLA 175
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.930e-35 Identity = 78/164 (47.56%), Postives = 112/164 (68.29%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSK 586 G P ++L+ E R G DAQ+ N+ A + +A ++++LGPKGMDKML GDV ITNDG TIL++MDV++ AK+++E++++QD E+GDGTT VV+AG LL++AE+LL++ IHP IA GY MA+ AVE LE IA + + D E L + T + K Sbjct: 6 GTPVLILK--EGTQRTVGRDAQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTILKEMDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRMAANKAVEILESIA--MDIDVEDEETLKKIAATAITGK 165
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.930e-35 Identity = 81/167 (48.50%), Postives = 116/167 (69.46%), Query Frame = 2 Query: 116 RQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 R++ K + + + +N+ A KAVA +RTSLGP+GMDKM+QS +GDVTITNDGATIL QM V + AK++VELS++QD E GDGTT VVVMAG+LL+ A+ LL +GIHP I+E ++ A+ A + L+ ++ + + L L + T+LNSK+V++ LA Sbjct: 19 RERNFKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDAL--LNKMATTSLNSKVVSQHSWLLA 183
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THSB_THEK8 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.827e-35 Identity = 80/174 (45.98%), Postives = 114/174 (65.52%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ ITNDGATIL++MD+ + AK+MVE++++QD E GDGTT VV+AG LL +AE+LL++ IHP I +GY +A+ A E L+ IA+ + + D E L + MT + K + LA Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDSIAR--DVDVEDREILKKAAMTAITGKAAEEEREYLA 175
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 3.827e-35 Identity = 78/173 (45.09%), Postives = 116/173 (67.05%), Query Frame = 2 Query: 98 RPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 +P +L Q + SR G +AQ+ N+ AGK +A +RT+LGPKGMDKML GD+ ITNDG TIL +MD+ + AK++VE++++Q+ E+GDGTT V++AG LL++AEKL+E G+HP IA GY A+ A E LE I+ + +D + L++ +T + K R + +LA Sbjct: 6 QPIFILPQ--DTSRYVGREAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVITNDGVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHPTIIALGYRNAALKAQEILEEISME----ASDRDTLMKVAITAMTGKGSERAKEKLA 172
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 4.998e-35 Identity = 81/166 (48.80%), Postives = 116/166 (69.88%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMV 592 G P I+L++ ++S G +A +AN+ A +A+A+IL+T+ GPKGMDKML GD+TITN+GATIL++MDV + AK++V++S+ Q+ E GDGT V+ AG LL++AEKLL+ IHP I EGY+ A R A E +E IA+ + +D+E L T+LNSK V Sbjct: 13 GIPVIILKEGTQRSY--GREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKASEVIESIAEPVSY--DDVEKLKLIAKTSLNSKAV 174 The following BLAST results are available for this feature:
BLAST of FC876441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 430
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876441 ID=FC876441; Name=FC876441; organism=Citrus clementina; type=EST; length=616bpback to top |