FC876441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.582e-33 Identity = 75/162 (46.30%), Postives = 112/162 (69.14%), Query Frame = 2 Query: 101 PFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSK 586 P ++L+ E R +G +AQ+ N+ A KA+A +RT+LGPKGMDKML GD+ I+NDGATIL++MDV++ AK++VE+S++QD +GDGTT VV++G LL+QAE LL++G+HP I+ GY +A A + ++ IA+K D L + +T L+ K Sbjct: 7 PILVLK--EGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK----STDDATLRKIALTALSGK 162
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 3.582e-33 Identity = 74/163 (45.40%), Postives = 107/163 (65.64%), Query Frame = 2 Query: 98 RPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSK 586 +P I+L E+ R G DAQ N++AGKAVA +RT+LGPKGMDKML G+V +TNDG TIL++MD+++ A ++VE++ +Q+ E+GDGTT VV++G LL +AE LLE+ IH +A+GY A+ A E L+ A + +D E L + T + K Sbjct: 8 QPLIVL--SEDSQRTSGEDAQSMNITAGKAVAESVRTTLGPKGMDKMLVDSSGEVVVTNDGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHATTLAQGYRQAAEKAKELLDDAA--IDVSADDTETLEKIAATAMTGK 166
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 4.678e-33 Identity = 72/162 (44.44%), Postives = 116/162 (71.60%), Query Frame = 2 Query: 131 KSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 K++ + + +KAN+ A ++VA +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +A+++VE+S +QD E GDGTT VV++ G+LL AE+LL +GIHP IA+ ++ A++ +V+ L + K L+D E LV+ T+L+SK+V++ LA Sbjct: 12 KNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHK--VSLSDREQLVRAASTSLSSKIVSQYSSFLA 171
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.678e-33 Identity = 71/156 (45.51%), Postives = 113/156 (72.44%), Query Frame = 2 Query: 131 KSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNR 598 K++ + + ++AN+ A +AVA +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +AK++V++S +QD E GDGTT VV++ G+LL A++LL +GIHP IAE ++ A+R +VE L I L+D E L++ T+L+SK+V++ Sbjct: 13 KNKEKPQEVRRANIVAARAVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVAKMLVDVSAAQDSEAGDGTTSVVILTGALLGAADRLLNKGIHPTIIAESFQKAARRSVETLLEICH--PVSLDDREDLIRAASTSLSSKIVSQ 166
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 7.980e-33 Identity = 75/168 (44.64%), Postives = 117/168 (69.64%), Query Frame = 2 Query: 101 PFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEF-GLNDL---EPLVQTCMTTLNSKMV 592 P +LL++ ++S G DA K N+ A +A +L++SLGP+G+DKML GDVTITNDGATI+++M++ + AKL+VE +++QD E+GDGTT VV+AG LL++A+ LL++ IHP I EGY+ A ++E ++++A K + LN L + L + TT++SK + Sbjct: 5 PVLLLKEGTQRSS--GRDALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYKKALNKSLEIIDQLATKIDVSNLNSLATRDQLKKIVYTTMSSKFI 170
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.361e-32 Identity = 70/172 (40.70%), Postives = 115/172 (66.86%), Query Frame = 2 Query: 98 RPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRL 613 +P ++L E R G DAQ+ N+ AG+ + +R++LGPKGMDKML GD+ +TNDG TIL++M V++ AK+++E++++Q+ E+GDGTT VV+AG LL +AE+LL++ +HP + +GY++A + A E L+ IA + +D E L + MT++ K + + +L Sbjct: 5 QPVVVL--PENVKRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQEVLKEIA--MDVKADDKEILHKIAMTSITGKGAEKAKEKL 172
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.361e-32 Identity = 76/174 (43.68%), Postives = 113/174 (64.94%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 G P I+L+ E SR G +A +AN++A KA+ L+++ GP+GMDKML GD+TITNDGATIL++MD+ + KL+V++++ QD E DGT V++AG L ++AE LL + IHP I GY+ A IA++ ++ IAQ +ND + L + +T+L SK V + LA Sbjct: 12 GIPVIILK--EGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQEIAQPVT--INDTDVLRKVALTSLGSKAVAGAREYLA 181
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.778e-32 Identity = 70/153 (45.75%), Postives = 108/153 (70.59%), Query Frame = 2 Query: 137 RLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVN 595 R G DA + N+ A +A++ +++T+ GPKGMDKML GDVTITNDGATIL++ ++ + AK++V++++SQD E+GDGT V++AG LL+ AE+LL++ IHP I GY MA A++ L+++A+ + LN+ E L + T+L SK V+ Sbjct: 2 RTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQHPAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKILDQMAEPID--LNNEELLRKVARTSLTSKAVH 152
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.032e-32 Identity = 73/163 (44.79%), Postives = 113/163 (69.33%), Query Frame = 2 Query: 122 QEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLE------PLVQTCMTTLNSKMV 592 +E SR G DA + N+ A +A +L++SLGP+G+DKML GDVTITNDGATI+++M++ + AKL+VE +++QD E+GDGTT VV+AG LL++AE+LLE+ +HP I +GY+ A A+E +++++ K + +NDL L + TT++SK + Sbjct: 9 KEGTSRSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALEIIDQLSLKID--VNDLSSPTAKAQLKKIVSTTMSSKFI 169
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.172e-32 Identity = 75/174 (43.10%), Postives = 112/174 (64.37%), Query Frame = 2 Query: 95 GRPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 G P I+L+ E SR G +A +AN++A KA+ L+++ GP+GMDKM GD+TITNDGATIL++MD+ + KL+V++++ QD E DGT V++AG L ++AE LL + IHP I GY+ A IA++ ++ IAQ +ND + L + +T+L SK V + LA Sbjct: 12 GIPVIILK--EGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQDIAQ--PVSINDTDVLRKVALTSLGSKAVAGAREYLA 181 The following BLAST results are available for this feature:
BLAST of FC876441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 430
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876441 ID=FC876441; Name=FC876441; organism=Citrus clementina; type=EST; length=616bpback to top |