FC876441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.755e-32 Identity = 69/155 (44.52%), Postives = 110/155 (70.97%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 + +K+N+ A +AV+ +RTSLGPKGMDKM+++ +G++ I+NDGATIL+ M V + A+++V++S +QD E GDGTT V ++ GSLL AEKLL +GIHP I+E ++ A+ + E L ++ K L+D E L++ T+L+SK+V++ L+ Sbjct: 24 EVRKSNILAARAVSDAIRTSLGPKGMDKMIKTKNGEIIISNDGATILKHMAVLHPAARMLVDVSAAQDVEAGDGTTSVAILTGSLLGAAEKLLNKGIHPTLISESFQRAATRSAEVLLEMSHK--ISLDDKEALIRAASTSLSSKIVSQHSSLLS 176
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.152e-31 Identity = 69/149 (46.31%), Postives = 100/149 (67.11%), Query Frame = 2 Query: 125 EEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMT 571 E +R G AQ +N+ AGKAVA +RT+LGP+GMDKML G+V ITNDGATILE+MD+++ A+++VE+S++Q+ E+GDGTT V+ G LL AE LL+ +HP I EGY A+RIA + ++ + + L + ++ MT Sbjct: 14 EGTNRTHGRSAQDSNIRAGKAVAEAVRTTLGPRGMDKMLVDSSGEVVITNDGATILEKMDIEHPAAQMLVEVSQTQEEEVGDGTTTAAVLTGELLAHAEDLLDDDLHPTVIVEGYTEAARIAQDAIDDMVLDVTLDDDLLRKVAESSMT 162
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.274e-30 Identity = 68/149 (45.64%), Postives = 104/149 (69.80%), Query Frame = 2 Query: 152 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNR 598 D + +N+ A +AVA +RTSLGPKGMDKM+ SP+ +V I+NDGATIL+ +++ + AK++ EL+++QD E GDGTT V V+AGSLL +L+ +GIHP I+E + +A ++E L ++ L D LV++ T+LNSK+V++ Sbjct: 26 DVRTSNIVAARAVADAIRTSLGPKGMDKMIISPNNEVLISNDGATILQNLELRHPAAKMLAELAKAQDIEAGDGTTSVCVIAGSLLGAVSQLMAKGIHPSIISEAFNLALNKSLEVL--VSMSVPVSLTDRVSLVKSATTSLNSKVVSQ 172
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.258e-30 Identity = 66/155 (42.58%), Postives = 103/155 (66.45%), Query Frame = 2 Query: 137 RLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPLVQTCMTTLNSKMVN 595 R G +K NV A + A ++TSLGP G+DKML GDVTITNDGATIL+ +DV++ AK++V+L++ QD E+GDGTT VV++A +LL+ A++L+ R +HP + GY +A R A ++++ + + +N L L+ T ++SK++N Sbjct: 8 RTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQ---EHMAYDVNKLGKAGLINVARTAMSSKLIN 159
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.409e-29 Identity = 67/154 (43.51%), Postives = 106/154 (68.83%), Query Frame = 2 Query: 137 RLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPLVQTCMTTLNSKMV 592 R +G D + NV+A A+A I+++SLGP+G+DKML GDVTITNDGATIL Q++V + AK++VELS+ QD E+GDGTT VV++A LL++A +L++ +HP I G+++A++ A + I + + +L E L+ T+++SK++ Sbjct: 11 RDQGQDVRTNNVTAVMAIANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILRQLEVQHPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKIAAKEACTY---IKEHLAISVEELGREALINAAKTSMSSKLI 161
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.409e-29 Identity = 70/154 (45.45%), Postives = 104/154 (67.53%), Query Frame = 2 Query: 137 RLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL-ERIAQKFEFGLNDLEPLVQTCMTTLNSKMVN 595 R G D + NV A +AV+ I++TSLGP G+DKML GDVTITNDGATIL ++V++ AK++VEL+ QD E+GDGTT VV++A LL++A L+ IHP I GY +A R + +++ E++ K E L + PL+ T+++SK+++ Sbjct: 14 RQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKVE-KLGKV-PLINCAKTSMSSKLIS 165
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.352e-29 Identity = 65/152 (42.76%), Postives = 99/152 (65.13%), Query Frame = 2 Query: 137 RLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMV 592 ++ G D + NV A A+A ++++SLGP G+DKML GDVT+TNDGATIL +DV++ K++VEL++ QD E+GDGTT VV++A LL +A +L++ IHP I GY +A R AV+ + + L E L+ T+++SK++ Sbjct: 16 KISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLGK-ESLINVAKTSMSSKII 166
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.557e-28 Identity = 72/168 (42.86%), Postives = 100/168 (59.52%), Query Frame = 2 Query: 98 RPFILLRQQEEKSRLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEF-GLNDLEPLVQTCM-TTLNSKMVN 595 R + + Q K R +G AQ AN+ A +AV+ I+RT+LGPK M KML P G + +TNDG IL ++DV + AK M+EL+R+QD E+GDGTT V+++AG +L E LER IHP I Y A V E + + NDL+ +V +C+ T +SK N Sbjct: 4 RAAVFILNQNAK-REQGRKAQTANIKAARAVSDIVRTTLGPKSMLKMLLDPMGGIVLTNDGNAILREIDVAHPAAKSMIELARAQDEEVGDGTTSVIILAGEILSAVESFLERDIHPTVIVGAYFQALEEIVRLTESYGEPIDIENENDLQKIVSSCIGTKFSSKWGN 170
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.557e-28 Identity = 63/154 (40.91%), Postives = 106/154 (68.83%), Query Frame = 2 Query: 137 RLRGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPLVQTCMTTLNSKMV 592 R G + NV+A A+A I+++SLGP G+DKML GDV +TNDGATIL+Q++V++ K++VEL++ QD E+GDGTT VV++A LL++A++L+++ +HP I GY +A + AV++ I++ F + + + +V T+++SK++ Sbjct: 15 RTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKY---ISENISFTSDSIGRQSVVNAAKTSMSSKII 165
BLAST of FC876441 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 3.469e-28 Identity = 68/162 (41.98%), Postives = 105/162 (64.81%), Query Frame = 2 Query: 143 RGPDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPD----GDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRXQRRLA 616 RG A+ ++ A+ +++++LGPKGMDK+L S + G + +TNDGATIL+ + VDN AK++V++S +QD+E+GDGTT V V+A LL++AEKL+ + IHP I GY A IA E L++ E G N + L++ TTL SK++++ + A Sbjct: 15 RGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKK--SSIESGDNIRDDLLKIARTTLGSKILSQHKEHFA 174 The following BLAST results are available for this feature:
BLAST of FC876441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 430
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876441 ID=FC876441; Name=FC876441; organism=Citrus clementina; type=EST; length=616bpback to top |