FC876444

Overview
NameFC876444
Unique NameFC876444
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10210 contig Ccv1_Contig10210:14..756. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.286e-52
Identity = 117/200 (58.50%), Postives = 131/200 (65.50%), Query Frame = 1
Query:  115 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV-*LSSRPLIPESARDS 711
            FP  +  G A      +KDY +PPP P F+  EL  WSFYRA IAEFIA            +G K     A N+  CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEI+GTFVLV  + S      SARDS
Sbjct:   15 FPERQPIGTA--AQTESKDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDS 206          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.864e-52
Identity = 109/184 (59.24%), Postives = 126/184 (68.48%), Query Frame = 1
Query:  115 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            FP  +  G +   + S KDY +PPP P F+  EL+ WSF+RA IAEFIA            +G K      ++ + CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEIIGTFVLV
Sbjct:   15 FPERQPIGTS---AQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLV 189          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.864e-52
Identity = 109/184 (59.24%), Postives = 126/184 (68.48%), Query Frame = 1
Query:  115 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            FP  +  G +   + S KDY +PPP P F+  EL+ WSF+RA IAEFIA            +G K      ++ + CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEIIGTFVLV
Sbjct:   15 FPERQPIGTS---AQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLV 189          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.381e-52
Identity = 106/187 (56.68%), Postives = 126/187 (67.38%), Query Frame = 1
Query:  115 FPMAKDTGVAEHGSYSA---KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            F   +  G A  G+ +    KDY +PPP PLF+  EL  WSFYRA IAEF+A            +G       +K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAI G G+VK FQ+  Y   GGGAN +A GY+ G GL AEI+GTF+LV
Sbjct:   15 FSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGV------SKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILV 195          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.422e-51
Identity = 106/177 (59.89%), Postives = 120/177 (67.80%), Query Frame = 1
Query:  136 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            G A  G+   KDY +PP  P+F+  ELT WSFYRA IAEF+A            +G        K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM  QCLGAI G G+VK FQ+  Y   GGGAN +  GY+ G GL AEI+GTFVLV
Sbjct:   22 GTAAQGA-EEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVN------KSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLV 191          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.857e-51
Identity = 105/167 (62.87%), Postives = 118/167 (70.66%), Query Frame = 1
Query:  166 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            KDY +PPP PLF+  EL+ WSFYRA IAEF+A            +G K      ++   C+ VGI G+AWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YMV QCLGAI G G+VK F    Y R GGGAN +  GY+ G GL AEIIGTFVLV
Sbjct:   30 KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLK------RSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLV 190          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 9.215e-51
Identity = 112/201 (55.72%), Postives = 129/201 (64.18%), Query Frame = 1
Query:  115 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQ-KSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV-*LSSRPLIPESARDS 711
            FP  +  G+A       KDY +PPP PLF+  ELT WSFYRA IAEFIA            +G   ++        C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV Q LGAI G G+VK F+ K  +    GGAN +A GY+ G GL AEI+GTF+LV  + S      SARDS
Sbjct:   15 FPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSK------CKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDS 209          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.018e-50
Identity = 101/168 (60.12%), Postives = 116/168 (69.05%), Query Frame = 1
Query:  166 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQ-KSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            KDY DPPP PL D  EL KWS YRA IAEF A            IG K Q+       G  G G+LGIAWAFGG+IFVLVYCTAGISGGH+NPAVTF + LAR+VSL RA +Y +AQC+GA+ G GL +A      Y R+GGGANELA GYS G G+ AE++GTFVLV
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQS-------GEGGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLV 172          

HSP 2 Score: 25.409 bits (54), Expect = 1.018e-50
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  669 TVFSATDPRERQR-LHVP 719
            TVFSATDP+ + R  HVP
Sbjct:  174 TVFSATDPKRKARDSHVP 191          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.053e-50
Identity = 104/191 (54.45%), Postives = 128/191 (67.02%), Query Frame = 1
Query:   94 LQIIVTGFPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            +++ V  FP  +  G A       +DY++PP  PLF+A EL+ WSFYRA IAEF+A            +G       +K+   C  VGI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RAV Y+V QCLGA+ G G+VKAF  + Y   GGGAN ++ GY+ G GL AE++GTFVLV
Sbjct:   15 VRVGVDRFPERQPIGTAADDL--GRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGV------SKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLV 197          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.698e-47
Identity = 101/177 (57.06%), Postives = 118/177 (66.67%), Query Frame = 1
Query:  136 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            G A  G+   KDY +PPP PLF+  EL  WSFYR  IAEF+A            +G       +K+   CA VGI GIAW+FGGMI  LVYCTAGISG HINPAVTFGLFLARK+SL RAV Y++ QCLGAI G G+VK FQ+  Y   GG  N +A GY+ G GL AEI+GTF+LV
Sbjct:   22 GTAAQGT-DDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGV------SKSTSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILV 190          

HSP 2 Score: 23.483 bits (49), Expect = 1.698e-47
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  669 TVFSATDPRERQR-LHVP 719
            TVFSATD + R R  HVP
Sbjct:  192 TVFSATDAKRRARDSHVP 209          
The following BLAST results are available for this feature:
BLAST of FC876444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
PIP15_ARATH1.286e-5258.50Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP11_VICFA2.864e-5259.24Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH2.864e-5259.24Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP13_MAIZE6.381e-5256.68Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP13_ORYSJ1.422e-5159.89Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP1_SOLLC1.857e-5162.87Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP2_PEA9.215e-5155.72Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP28_ORYSJ1.018e-5060.12Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP16_MAIZE2.053e-5054.45Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP11_MAIZE1.698e-4757.06Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32004H03EF DevOvary1 Citrus clementina cDNA clone C32004H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876444 ID=FC876444; Name=FC876444; organism=Citrus clementina; type=EST; length=742bp
GATCCAAAACAACCAAAAAAAACAAGAAAAAGAAAAAGGCTTCTCTCTCG
TTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTCTCTCCAAA
TCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTGGCAGAGCAC
GGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGAGCCGCTATT
CGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCTTGATAGCTG
AGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTCTTGACTGTCATT
GGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCTGTGCCGG
CGTCGGCATCCTCGGTATCGCCTGGGCCTTCGGTGGCATGATCTTTGTCC
TCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCCGGCAGTG
ACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTGCTGTGAT
GTACATGGTGGCGCAGTGCCTTGGTGCAATCTCCGGTGTTGGGTTGGTCA
AGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGCCAACGAG
CTGGCCGATGGGTACAGCATAGGCGTTGGATTGGCCGCCGAGATCATCGG
CACCTTTGTGTTGGTTTAACTGTCTTCTCGGCCACTGATCCCAGAGAGCG
CCAGAGACTCCATGTCCCGTTTTGCACGCTCCCATGGATTGC
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