FC876444

Overview
NameFC876444
Unique NameFC876444
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10210 contig Ccv1_Contig10210:14..756. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.448e-19
Identity = 62/159 (38.99%), Postives = 84/159 (52.83%), Query Frame = 1
Query:  205 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYK-----SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            A E  K  F+RA++AEF+A            +G+K     +QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+MY++AQC+GAI    ++     S  T    G N+LADG + G GL  EIIGT  LV
Sbjct:    2 ASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS-LTGNSLGRNDLADGVNSGQGLGIEIIGTLQLV 150          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 61/159 (38.36%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  205 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYK-----SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            A E  K  F+RA++AEF+A            +G+K     +QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+MY++AQC+GAI    ++     S       G N+LADG + G GL  EIIGT  LV
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS-LPGNSLGRNDLADGVNSGQGLGIEIIGTLQLV 150          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.586e-18
Identity = 59/154 (38.31%), Postives = 80/154 (51.95%), Query Frame = 1
Query:  205 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            A E  K  F+RA++AEF+A            +G+        N    A    + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G NELA G + G GL  EIIGT  LV
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMILFVFISIGSALGFNYPV--RNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDN-SLGRNELAPGVNSGQGLGIEIIGTLQLV 152          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 60/159 (37.74%), Postives = 84/159 (52.83%), Query Frame = 1
Query:  205 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGY-----KSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            A E+ K  F+RA++AEF+A            +G+     ++QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N+LA G + G GL  EIIGT  LV
Sbjct:    2 ASEIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDN-SLGRNDLAHGVNSGQGLGIEIIGTLQLV 150          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 91.6633 bits (226), Expect = 4.616e-18
Identity = 60/159 (37.74%), Postives = 84/159 (52.83%), Query Frame = 1
Query:  205 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGY-----KSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            A E+ K  F+RA++AEF+A            +G+     ++QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N+LA G + G GL  EIIGT  LV
Sbjct:    2 ASEIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLEN-SLGRNDLARGVNSGQGLGIEIIGTLQLV 150          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 6.028e-18
Identity = 59/154 (38.31%), Postives = 79/154 (51.30%), Query Frame = 1
Query:  205 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            A E  K  F+RA++AEF+A            +G+  Q     N    A    + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N LA G   G GL  EIIGT  LV
Sbjct:    2 ASEFKKKIFWRAVVAEFLAMTLFIFISIGSALGF--QYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSS-LPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLV 152          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.873e-18
Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = 1
Query:  205 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            A E  K +F+RA+IAEF+A            +G+    +   N        I+ ++ AFG  I  +      +SG H+NPAVT G  L+ ++S+++AVMY++AQCLGA+    ++     S       G N L+ G S G GL  EI+ TF LV
Sbjct:    2 ASEFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGI-TSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLV 154          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 3.908e-17
Identity = 58/155 (37.42%), Postives = 81/155 (52.26%), Query Frame = 1
Query:  205 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGV-GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            A E  K  F+RA++AEF+A            +G+     P K+      V   + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+MY++AQC+GAI    ++     S       G N LA G + G GL  EIIGT  LV
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHY---PIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLV 152          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 6.665e-17
Identity = 58/155 (37.42%), Postives = 81/155 (52.26%), Query Frame = 1
Query:  205 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGV-GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            A E  K  F+RA++AEF+A            +G+     P K+      V   + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+MY++AQC+GAI    ++     S       G N LA G + G GL  EIIGT  LV
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHY---PIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLV 152          
BLAST of FC876444 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14
Identity = 51/147 (34.69%), Postives = 74/147 (50.34%), Query Frame = 1
Query:  226 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSIGVGLAAEIIGTFVLV 666
            +F++A+ AEF+A            I +    +P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y++AQCLGAI G G++           G G   +    + G GL  E+I TF LV
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLV 171          
The following BLAST results are available for this feature:
BLAST of FC876444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
AQP1_HUMAN2.448e-1938.99Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB1.215e-1838.36Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_CANFA1.586e-1838.31Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE2.072e-1837.74Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_RAT4.616e-1837.74Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_PIG6.028e-1838.31Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQPA_RANES7.873e-1835.06Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP1_BOVIN3.908e-1737.42Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP6.665e-1737.42Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP4_MOUSE1.390e-1434.69Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32004H03EF DevOvary1 Citrus clementina cDNA clone C32004H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876444 ID=FC876444; Name=FC876444; organism=Citrus clementina; type=EST; length=742bp
GATCCAAAACAACCAAAAAAAACAAGAAAAAGAAAAAGGCTTCTCTCTCG
TTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTCTCTCCAAA
TCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTGGCAGAGCAC
GGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGAGCCGCTATT
CGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCTTGATAGCTG
AGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTCTTGACTGTCATT
GGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCTGTGCCGG
CGTCGGCATCCTCGGTATCGCCTGGGCCTTCGGTGGCATGATCTTTGTCC
TCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCCGGCAGTG
ACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTGCTGTGAT
GTACATGGTGGCGCAGTGCCTTGGTGCAATCTCCGGTGTTGGGTTGGTCA
AGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGCCAACGAG
CTGGCCGATGGGTACAGCATAGGCGTTGGATTGGCCGCCGAGATCATCGG
CACCTTTGTGTTGGTTTAACTGTCTTCTCGGCCACTGATCCCAGAGAGCG
CCAGAGACTCCATGTCCCGTTTTGCACGCTCCCATGGATTGC
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