FC876445

Overview
NameFC876445
Unique NameFC876445
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14552 contig Ccv1_Contig14552:77..737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876445 vs. ExPASy Swiss-Prot
Match: AMPM_PYRHO (Methionine aminopeptidase OS=Pyrococcus horikoshii GN=map PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14
Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 3
Query:  135 VTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHT 455
            V K   A +IA K  +  V   KPGV +++L EK +S I E  G              AFP+ +S+N    H++P   D+TVL+EGD +KIDLG HIDG+IA  A T
Sbjct:    3 VDKLIEAGKIAKKVREEAVKLAKPGVSLLELAEKIESRIVELGGKP------------AFPANLSLNEVAAHYTPYKGDQTVLKEGDYLKIDLGVHIDGYIADTAVT 97          
BLAST of FC876445 vs. ExPASy Swiss-Prot
Match: AMP2B_ARATH (Methionine aminopeptidase 2B OS=Arabidopsis thaliana GN=MAP2B PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.103e-13
Identity = 49/175 (28.00%), Postives = 85/175 (48.57%), Query Frame = 3
Query:   99 EEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQD--EPVTGRXXXXXXXXXXXXXXXLRLVRPGKKNKDVTEAIQKVAAAYDCKI 617
            E++EL+     +    + AAE+  +  + V S  KPG+ + D+CE  ++ +R+         +  ++ G+AFP+  S+N    H++P + D+TVLQ  D++K+D G HIDG I   A T       +P+                  +RL        D+  AIQ+V  +Y+ +I
Sbjct:  115 EKRELERFEKPIYNSVRRAAEVHRQVRKYVRSIVKPGMLMTDICETLENTVRKLIS------ENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGHIIDCAFTVAFNPMFDPLLAASREATYTGIKEAGIDVRLC-------DIGAAIQEVMESYEVEI 276          
BLAST of FC876445 vs. ExPASy Swiss-Prot
Match: ARX1_CANAL (Probable metalloprotease ARX1 OS=Candida albicans GN=ARX1 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.776e-12
Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 3
Query:  105 KELDLTSPEVVTKYKSAAEIANKALQLVVS--------ECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDET--VLQEGDMIKIDLGCHIDGFIAVVAHTHVL 464
            K+ ++    VV KY+ A +I   AL  + S        +  P + I  LC   DSF+ +     Y N  K  E+G+A P+ ++VN  L  FSP   DE    L +GD++ I LG HIDG+ + V+HT V+
Sbjct:   15 KQKNVLDELVVEKYRVAGQITQTALAYITSLINNSYHLQTSPKLTIQQLCLLTDSFLLKLLSRQYVN--KVNEKGIAHPTTINVNQLLNGFSPEIDDEREFFLNQGDVVTISLGVHIDGYTSQVSHTLVI 142          
BLAST of FC876445 vs. ExPASy Swiss-Prot
Match: AMPM_ARCFU (Methionine aminopeptidase OS=Archaeoglobus fulgidus GN=map PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 51/178 (28.65%), Postives = 83/178 (46.63%), Query Frame = 3
Query:  129 EVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGV--AFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDEPVTGRXXXXXXXXXXXXXXXLRLVRPGKKNKDVTEAIQKVAAAYDCKIVEGVLSHQLKQFV 656
            EV  K   A +I  +A+     +  PGVKI+++ E  ++ I              IE G   AFP+ +S+N+   HF+P  +DE   +EGD++K+D+G HIDG+IA +A T  L D                     + +VR G    ++ +AI+     Y  K +  +  H L  ++
Sbjct:    4 EVREKLIEAGKILKQAVNEAAEKIAPGVKILEVAEFVENRI--------------IELGAKPAFPANISINSDAAHFTPKKNDERTFKEGDVVKLDVGAHIDGYIADMAVTVDLGDN------TELVKAAKEALEAAMEVVRAGVSVSEIGKAIEDAITNYGFKPIVNLTGHGLLPYL 161          
BLAST of FC876445 vs. ExPASy Swiss-Prot
Match: AMPM_PYRFU (Methionine aminopeptidase OS=Pyrococcus furiosus GN=map PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12
Identity = 40/105 (38.10%), Postives = 55/105 (52.38%), Query Frame = 3
Query:  141 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHT 455
            K   A EIA K  +  +   +PG+ +++L E  +  I E  G              AFP  +S+N    H++P   D TVL+EGD +KID+G HIDGFIA  A T
Sbjct:    5 KLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMELGGKP------------AFPVNLSINEIAAHYTPYKGDTTVLKEGDYLKIDVGVHIDGFIADTAVT 97          
BLAST of FC876445 vs. ExPASy Swiss-Prot
Match: AMPM_PYRAB (Methionine aminopeptidase OS=Pyrococcus abyssi GN=map PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.167e-12
Identity = 44/109 (40.37%), Postives = 58/109 (53.21%), Query Frame = 3
Query:  135 VTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGV--AFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHT 455
            V K   A +IA K  +  V   KPGV +++L EK +  I              IE G   AFP  +S+N    H++P   DET L+EGD +KID+G HIDG+IA  A T
Sbjct:    3 VDKLIEAGKIAKKVREEAVKLAKPGVSLLELAEKIEGRI--------------IELGAKPAFPVNLSLNEIAAHYTPYKGDETTLKEGDYLKIDIGVHIDGYIADTAVT 97          
BLAST of FC876445 vs. ExPASy Swiss-Prot
Match: AMPM_METFE (Probable methionine aminopeptidase (Fragment) OS=Methanothermus fervidus PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11
Identity = 44/181 (24.31%), Postives = 82/181 (45.30%), Query Frame = 3
Query:  141 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQ--------DEPVTGRXXXXXXXXXXXXXXXLRLVRPGKKNKDVTEAIQKVAAAYDCKIVEGVLSHQLKQFVI 659
            K+K A +IA+K  +  +   K  +KI+DL E              +N  +K+    AFP  +SVN    H+SP  +D+  +  GD++KID+G H+DGFI   A T +++        ++ +  +               +  +R G +   + E I+     +  K +  +  H + ++V+
Sbjct:    3 KFKKAGKIASKVRKKAIKAVKGEMKILDLAE------------FIENEIEKMGAKPAFPCNISVNEITAHYSPPCNDDRKILPGDLVKIDIGVHVDGFIGDTATTVLVEGYEDLKNYNDELAEKNKKMIEAAESALENAINTIRDGVEIGKIGEVIENTINKFGFKPISNLTGHTIDRWVL 171          
BLAST of FC876445 vs. ExPASy Swiss-Prot
Match: ARX1_YARLI (Probable metalloprotease ARX1 OS=Yarrowia lipolytica GN=ARX1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 56/210 (26.67%), Postives = 94/210 (44.76%), Query Frame = 3
Query:  108 ELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVK---IVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDET---VLQEGDMIKIDLGCHIDGFIAVVAHTHVLQ----------DEPVTGRXXXXXXXXXXXXXXXLRLV------RPGKKNKDVT-----EAIQKVAAAYDCKIVEGVLSHQLKQFV 656
            E +  +  V  KY+ A +I    LQ ++       +   + ++C  GD F+   T  +YK+V    E+G+A P  +     +   SP   D+    +L  GD++KI LG +IDG+ A V  T V++          ++P+TG                +  +       PGK    VT     E ++K+AAAY  KIV G    ++++F+
Sbjct:   12 EKNTLTSSVTDKYRLAGKITQTCLQHIIQTVLTQYETYTVGEMCRMGDEFLERATTAVYKSVA---EKGIAQPVRIEKQEFVGGVSPENGDKFQGGMLAPGDLVKISLGVYIDGYTAQVTQTEVVRHVPNTSAGETEQPLTGSPADAVCASYLASEAVIAYLAQVTDPNPGKAVGVVTGTKIRELVEKIAAAYHVKIVPGSSVRRIRRFL 218          
BLAST of FC876445 vs. ExPASy Swiss-Prot
Match: AMPM_PYRKO (Methionine aminopeptidase OS=Pyrococcus kodakaraensis GN=map PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 48/167 (28.74%), Postives = 75/167 (44.91%), Query Frame = 3
Query:  153 AAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDEPVTGRXXXXXXXXXXXXXXXLRLVRPGKKNKDVTEAIQKVAAAYDCKIVEGVLSHQLKQF 653
            A EIA +  + VV   KPG K+ D+ E  +  I E  G              AFP  +S+N    H++P   D TVL+EGD +K+D+G H+DG+IA  A T  +  E                    +  VR G   +DV  AI++         +  +  H+++++
Sbjct:   10 AGEIARQVKKEVVDLIKPGAKLYDIAEFVERRIVELGGKP------------AFPCNLSINEIAAHYTPYKGDGTVLKEGDYLKLDIGVHVDGYIADTAVTFRVGME-----EDELMEAAREALENAIATVRAGVMIRDVARAIEETIRGKGFNPIVNLSGHKVERY 159          
BLAST of FC876445 vs. ExPASy Swiss-Prot
Match: AMPM2_DICDI (Methionine aminopeptidase 2 OS=Dictyostelium discoideum GN=metap2 PE=3 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11
Identity = 41/134 (30.60%), Postives = 72/134 (53.73%), Query Frame = 3
Query:   63 STKIKTMSDDEREEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIR---EQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHT 455
            S   +T S+++R E+ +      +    + AAE+  +  + V    KPG+ + +L E  ++  R   E  G         ++ G+AFP+ VS+N+   HF+P   D+TVL++ D++KID G H++G+I   A T
Sbjct:  105 SNSYRTTSEEKRLEERIHAN---IYNDVRRAAEVHRQVRKYVQGIVKPGLGLTELVESLENASRTLIEADG---------LKAGIAFPTGVSLNHIAAHFTPNTGDKTVLKKDDVLKIDFGTHVNGYIIDCAFT 226          
The following BLAST results are available for this feature:
BLAST of FC876445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
AMPM_PYRHO9.416e-1442.06Methionine aminopeptidase OS=Pyrococcus horikoshii... [more]
AMP2B_ARATH6.103e-1328.00Methionine aminopeptidase 2B OS=Arabidopsis thalia... [more]
ARX1_CANAL1.776e-1235.38Probable metalloprotease ARX1 OS=Candida albicans ... [more]
AMPM_ARCFU2.319e-1228.65Methionine aminopeptidase OS=Archaeoglobus fulgidu... [more]
AMPM_PYRFU3.956e-1238.10Methionine aminopeptidase OS=Pyrococcus furiosus G... [more]
AMPM_PYRAB5.167e-1240.37Methionine aminopeptidase OS=Pyrococcus abyssi GN=... [more]
AMPM_METFE1.503e-1124.31Probable methionine aminopeptidase (Fragment) OS=M... [more]
ARX1_YARLI2.564e-1126.67Probable metalloprotease ARX1 OS=Yarrowia lipolyti... [more]
AMPM_PYRKO2.564e-1128.74Methionine aminopeptidase OS=Pyrococcus kodakaraen... [more]
AMPM2_DICDI4.374e-1130.60Methionine aminopeptidase 2 OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionC32004H04EF DevOvary1 Citrus clementina cDNA clone C32004H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876445 ID=FC876445; Name=FC876445; organism=Citrus clementina; type=EST; length=661bp
GGATTAGACTTTAACAGAACTCTCATTTCCCGTTTCTTTTACAGATTGTT
TGGTAGATTTTTTCTACAAAAATCAAAACGATGTCGGACGATGAAAGGGA
GGAGAAGGAGTTGGATCTCACTTCTCCTGAAGTTGTCACCAAATACAAAA
GCGCTGCTGAGATCGCCAATAAGGCGTTGCAGTTGGTAGTATCAGAATGC
AAACCCGGTGTTAAGATTGTTGACCTTTGTGAGAAGGGAGATTCATTTAT
TAGAGAACAAACCGGCAACATGTACAAGAATGTAAAGAAGAAGATCGAGA
GGGGCGTTGCATTCCCAAGTTGTGTTTCTGTTAACAACACACTCTGTCAT
TTTTCACCACTTGCAAGTGATGAGACAGTCTTGCAAGAAGGAGACATGAT
CAAGATTGATTTGGGATGTCACATAGATGGGTTTATTGCTGTAGTTGCAC
ACACTCATGTCCTCCAGGATGAGCCTGTAACAGGCAGGGCAGCTGATGTT
ATTGCTGCAGCAAATACTGCTGCTGAGGTTGCCTTGAGGCTTGTAAGGCC
AGGAAAGAAGAACAAAGATGTAACAGAAGCCATTCAGAAGGTAGCTGCTG
CATATGATTGCAAGATTGTTGAAGGTGTTCTCAGCCACCAGCTGAAGCAG
TTTGTGATTGA
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