FC876447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DDX49_DROME (Probable ATP-dependent RNA helicase Dbp45A OS=Drosophila melanogaster GN=Dbp45A PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.612e-25 Identity = 58/106 (54.72%), Postives = 73/106 (68.87%), Query Frame = 3 Query: 294 FAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMD 611 F LGL W V+ +LG++ TP+Q CIP IL G+D +G A+TGSGKT AFALPIL RL+E+P ALV+TPT ELAYQ++EQF G + +R VV GG D Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERLSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTD 114
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_KLULA (ATP-dependent RNA helicase DBP8 OS=Kluyveromyces lactis GN=DBP8 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.612e-25 Identity = 54/112 (48.21%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 282 STVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 617 S F LG ++W V+ + + +PT +Q CIP+IL+G+D +G A TGSGKT AFA P+L + +EDP G+ +V+TPTRELA Q+AEQF A GS +++R +VVGG ++ Sbjct: 2 SNSEFKSLGCSKWLVEALNAMKIVQPTAIQKACIPEILKGRDCIGGANTGSGKTIAFAAPMLTKWSEDPQGMFGIVLTPTRELAMQIAEQFTAFGSAMNIRVAIVVGGESIV 113
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: RRP3_CANGA (ATP-dependent rRNA helicase RRP3 OS=Candida glabrata GN=RRP3 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.105e-25 Identity = 62/131 (47.33%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 225 KTAQLEKFTNPDPNSTTTDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 617 K A+ EK P+ T +FA L L +Q C+ L +PTP+Q IP L G DV+GLAQTGSGKTAAFA+PIL++L ED A V+ PTRELA Q+ E F +LGS + +R +VGGM+++ Sbjct: 56 KQAKDEKVEEPEEEVTFE----SFAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGLAQTGSGKTAAFAIPILNKLWEDQQPYYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMM 182
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_MAGGR (ATP-dependent RNA helicase DBP8 OS=Magnaporthe grisea GN=DBP8 PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.105e-25 Identity = 54/113 (47.79%), Postives = 79/113 (69.91%), Query Frame = 3 Query: 276 TDSTVTFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 TD TF LG+ W VQ+ L ++RPT +Q CI +IL+G+D +G ++TGSGKT AFA+PIL + A+DP + A+V+T TR+LA Q+ EQFKA+ S L+ +++GG D+ Sbjct: 132 TDQNTTFESLGVEPWLVQSLANLAVKRPTGIQKGCIGEILKGRDCIGGSRTGSGKTIAFAVPILQKYAQDPSAIFAVVLTATRQLALQIYEQFKAVSSPHVLKAALIIGGSDM 244
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_ASPTN (ATP-dependent RNA helicase dbp8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dbp8 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.749e-25 Identity = 51/108 (47.22%), Postives = 79/108 (73.15%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDL 614 +F L +A W + + + +R+PT +Q CIP+IL+G+D +G ++TGSGKT AFA+PIL + AEDP+G+ A+V+TPTRELA Q+ EQFKA+ + ++ ++ GG D+ Sbjct: 87 SFKALNVAPWLIGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFAVPILQKWAEDPFGIFAVVLTPTRELALQIYEQFKAISAPQSMKPVLITGGTDM 194
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: RRP3_DEBHA (ATP-dependent rRNA helicase RRP3 OS=Debaryomyces hansenii GN=RRP3 PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.590e-25 Identity = 70/163 (42.94%), Postives = 91/163 (55.83%), Query Frame = 3 Query: 162 KSKTRSKXXXXXXXXXX-SKNAKTAQLEKFTNPDPN-----STTTDSTV-----TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 617 KSKT SK KNA Q ++ + N T D T +F L L ++ +++ +PTP+Q+ IP LEGKD++GLAQTGSGKTAAFA+PIL L E LV+ PTRELAYQ+ E F ALGS + LR +VGGMD++ Sbjct: 12 KSKTHSKKLDARALAEKIKKNALKQQAQEEPAKEENVAENFDTVVDPTAELKFKSFNELKLIPELLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQALWEAQAAYYGLVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMM 174
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: RH10_ORYSJ (DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica GN=Os03g0669000 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.590e-25 Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRL--AEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMD 611 TFA LG+ V C +G + PT +Q IP LEG+D++GL QTGSGKT AFALPI+ L + P + A V++PTRELA+Q+ +QF+ALGS + L C V+VGG+D Sbjct: 42 TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVD 150
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_USTMA (ATP-dependent RNA helicase DBP8 OS=Ustilago maydis GN=DBP8 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.998e-25 Identity = 55/111 (49.55%), Postives = 82/111 (73.87%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSG--LHLRCEVVVGGMDLL 617 +F+ +G++ +++ L ++ PTP+Q+ IP +LEG+D++G AQTGSGKT FALPIL++L +D G A+V+TPTREL QL EQF A+G G + LRC +V+GGMD++ Sbjct: 110 SFSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCFALPILNKLIKDMVGGFAVVLTPTRELGVQLHEQFVAVGEGARMGLRCALVLGGMDMM 220
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: RRP3_CANAL (ATP-dependent rRNA helicase RRP3 OS=Candida albicans GN=RRP3 PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.045e-24 Identity = 63/146 (43.15%), Postives = 89/146 (60.96%), Query Frame = 3 Query: 216 KNAKTAQLEKFTNPDPNSTTTDSTV----------TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRL--AEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 617 +NA Q E + ++T++ T TF L L +++ + + +PTP+Q+ IP LEGKD++GLAQTGSGKTAAFA+PIL L A+ PY ALV+ PTREL +Q+ + F ALGS + LR +VGGMD++ Sbjct: 89 ENANHNQTESSLSSSSSTTSSSITTIDPDAELKFKTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWHAQQPY--FALVLAPTRELTFQIKDTFDALGSSMGLRSSCIVGGMDMM 232
BLAST of FC876447 vs. ExPASy Swiss-Prot
Match: DBP8_LODEL (ATP-dependent RNA helicase DBP8 OS=Lodderomyces elongisporus GN=DBP8 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.364e-24 Identity = 52/109 (47.71%), Postives = 82/109 (75.23%), Query Frame = 3 Query: 291 TFAGLGLAEWAVQTCKELGMRRPTPVQTHCIPKILEGKDVLGLAQTGSGKTAAFALPILHRLAEDPYGVLALVITPTRELAYQLAEQFKALGSGLHLRCEVVVGGMDLL 617 +F LG+A+W ++ + + + PT +Q+ CIP+IL+G+D +G A+TGSGKT AFA +L + ++DP+G+ L++TPTRELA Q+AEQF ALG+ ++++ VVVGG D + Sbjct: 4 SFKELGVAKWLSESLEAMKIHSPTSIQSACIPEILKGRDCIGGAKTGSGKTIAFAALMLTQWSQDPFGIFGLILTPTRELALQIAEQFAALGALMNIKVCVVVGGEDFV 112 The following BLAST results are available for this feature:
BLAST of FC876447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876447 ID=FC876447; Name=FC876447; organism=Citrus clementina; type=EST; length=617bpback to top |