FC876448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_TOLAT (Diaminopimelate epimerase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=dapF PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.195e-15 Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD + E ++L DR+FGIG D ++ P + D+ RIFN+DGSE + CGNG RCFARF+ L+ L K V T Sbjct: 3 IQFSKMHGLGNDFVVVDGVTQ-KVFFNAETLKRLGDRHFGIGFDQLLLVEPPYDPDLDFHYRIFNADGSEVQQCGNGARCFARFV-RLKGLTNKDRIAVST 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_PSEPK (Diaminopimelate epimerase OS=Pseudomonas putida (strain KT2440) GN=dapF PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.195e-15 Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F K HGLGNDF+++D S I P+ A++ DR+ G+G D ++ P D+ RIFN+DGSE E CGNG RCFARF+ + + L K+ V T Sbjct: 3 LRFTKMHGLGNDFMVLD-LVSQHAHIQPKHAKQWGDRHTGVGFDQLLIVEAPNNPEVDFRYRIFNADGSEVEQCGNGARCFARFVLD-KRLTAKKRIRVET 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_PASMU (Diaminopimelate epimerase OS=Pasteurella multocida GN=dapF PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.195e-15 Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD + +PE ++L DR+ GIG D ++ P + D+ RIFN+DGSE CGNG RCFARF+ L+ L K+ V T Sbjct: 1 MQFSKMHGLGNDFVVVD-AITQNLYFSPETIKRLADRHRGIGFDQMLIVEPPYDPDLDFHYRIFNADGSEVSQCGNGARCFARFVT-LKGLTDKKDIAVST 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_ALKOO (Diaminopimelate epimerase OS=Alkaliphilus oremlandii (strain OhILAs) GN=dapF PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.195e-15 Identity = 45/100 (45.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K G GNDFI+V + + AEK+CDR+FGIGADG++ P + D M +NSDGS MCGNG+RCF++F+ + L KQ F+V T Sbjct: 3 VQFKKMQGTGNDFIVVKYDDFPFEEKLSQLAEKICDRHFGIGADGLLIVNPS-SIADIRMDYYNSDGSIAAMCGNGIRCFSKFVFDEGFLRTKQ-FSVET 100
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_ALISL (Diaminopimelate epimerase OS=Aliivibrio salmonicida (strain LFI1238) GN=dapF PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.195e-15 Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 329 HFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 HF K HGLGNDF++VD +P+ +L DRN GIG D ++ P TD+ RIFNSDG+E E CGNG RCFARF+ ++ L + + V T Sbjct: 4 HFSKMHGLGNDFMVVDCLTQNI-FFSPDLIRRLADRNRGIGFDQLLVVEAPYDPETDFHYRIFNSDGTEVEQCGNGARCFARFV-RMKGLTNRTTILVST 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_VIBVY (Diaminopimelate epimerase OS=Vibrio vulnificus (strain YJ016) GN=dapF PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.561e-15 Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 329 HFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 HF K HGLGNDF++VD + E +L DR+ G+G D ++ P TD+ RIFN+DGSE E CGNG RCFARF+ ++ L K S +V T Sbjct: 4 HFSKMHGLGNDFMVVDCITQNV-YFSQELIRRLADRHTGVGFDQLLVVEAPYDPETDFHYRIFNADGSEVEQCGNGARCFARFV-RMKGLTNKYSISVST 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_VIBVU (Diaminopimelate epimerase OS=Vibrio vulnificus GN=dapF PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.561e-15 Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 329 HFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 HF K HGLGNDF++VD + E +L DR+ G+G D ++ P TD+ RIFN+DGSE E CGNG RCFARF+ ++ L K S +V T Sbjct: 4 HFSKMHGLGNDFMVVDCITQNV-YFSQELIRRLADRHTGVGFDQLLVVEAPYDPETDFHYRIFNADGSEVEQCGNGARCFARFV-RMKGLTNKYSISVST 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_SODGM (Diaminopimelate epimerase OS=Sodalis glossinidius (strain morsitans) GN=dapF PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.038e-15 Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD + +PE +L DR+ G+G D ++ P + D+ RIFN+DGSE CGNG RCFARF+ ++NL K+ V T Sbjct: 1 MQFSKMHGLGNDFMVVD-AVTQNVYFSPEMIRRLSDRHCGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFV-RMKNLTNKRDIHVST 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RALEJ (Diaminopimelate epimerase OS=Ralstonia eutropha (strain JMP134) GN=dapF PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.038e-15 Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDF+++D + + +T EQ L R+FG+GAD ++ P D+ RIFN+DGSE E CGNG RCF RF+ + + + K+S V Sbjct: 3 LQFTKMHGAGNDFVVLDGIHQ-KLDLTTEQWRALASRHFGVGADQMLIVEKPTREDVDFRYRIFNADGSEVEHCGNGARCFVRFVTD-KGMTDKRSVRV 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_METPP (Diaminopimelate epimerase OS=Methylibium petroleiphilum (strain PM1) GN=dapF PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.038e-15 Identity = 47/102 (46.08%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEP-RITPEQAEKLCDRNFGIGADGV-IFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 L F K G GNDF+++D + EP ++P Q L DR FG+GAD V I G D+T RI N+DGSE E CGNG RCF R++ E L K + V T Sbjct: 3 LRFTKMQGAGNDFVVLDA--TREPLTLSPAQYRYLADRRFGVGADQVLIVGASDEPGIDFTYRIVNADGSEVEQCGNGARCFVRYVRE-AGLTKKSAIRVRT 101 The following BLAST results are available for this feature:
BLAST of FC876448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876448 ID=FC876448; Name=FC876448; organism=Citrus clementina; type=EST; length=625bpback to top |