FC876448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_CUPTR (Diaminopimelate epimerase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dapF PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.662e-15 Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDF+++D + + +TP Q L R+FG+GAD ++ P D+ RI N+DGSE E CGNG RCF RF+ E + + K+S V Sbjct: 3 LKFTKMHGAGNDFVVLDGIHQ-QIDLTPAQWRALASRHFGVGADQILIVEKPTRPDVDFRYRIVNADGSEVEHCGNGARCFVRFVTE-QGMTDKRSVRV 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_VIBCH (Diaminopimelate epimerase OS=Vibrio cholerae GN=dapF PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.477e-15 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 329 HFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVH 622 HF K HGLGNDF++VD +PE +L DR+ G+G D ++ P +D+ RIFN+DGSE E CGNG RCFARF+ ++ L K +T+H Sbjct: 4 HFSKMHGLGNDFMVVDCITQNV-FFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRIFNADGSEVEQCGNGARCFARFV-RMKGLTNK--YTIH 98
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_VIBC3 (Diaminopimelate epimerase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=dapF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.477e-15 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 329 HFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVH 622 HF K HGLGNDF++VD +PE +L DR+ G+G D ++ P +D+ RIFN+DGSE E CGNG RCFARF+ ++ L K +T+H Sbjct: 4 HFSKMHGLGNDFMVVDCITQNV-FFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRIFNADGSEVEQCGNGARCFARFV-RMKGLTNK--YTIH 98
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_SERP5 (Diaminopimelate epimerase OS=Serratia proteamaculans (strain 568) GN=dapF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.477e-15 Identity = 44/101 (43.56%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD + +PE +L DR+ G+G D ++ P + D+ RIFN+DGSE CGNG RCFARF+ L+ L K+ V T Sbjct: 1 MQFSKMHGLGNDFMVVD-AVTQNVYFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFV-RLKGLTNKRDIRVST 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_RALEH (Diaminopimelate epimerase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dapF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.477e-15 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTV 619 L F K HG GNDF+++D + + +TP Q L R+FG+GAD ++ P D+ RI N+DGSE E CGNG RCF RF+ + + + K+S V Sbjct: 3 LQFTKMHGAGNDFVVLDGIHQ-QIDLTPAQWRALASRHFGVGADQILIVEKPSRPDVDFRYRIVNADGSEVEHCGNGARCFVRFVTD-KGMTDKRSVRV 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_HAES2 (Diaminopimelate epimerase OS=Haemophilus somnus (strain 2336) GN=dapF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.477e-15 Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVD--NRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD +N P E ++L DRN GIG D ++ P + D+ RIFN+DGSE CGNG RCFARF+ L+ L K+ V T Sbjct: 1 MQFSKMHGLGNDFVVVDAVTQNIYFPT---EVIKRLADRNRGIGFDQLLVVEPPYDPDLDFHYRIFNADGSEVSQCGNGARCFARFVV-LKGLTNKKEIAVST 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_HAEIN (Diaminopimelate epimerase OS=Haemophilus influenzae GN=dapF PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.477e-15 Identity = 45/101 (44.55%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD TPE +L +R+ GIG D ++ P D+ RIFN+DGSE CGNG RCFARF+ L+ L K+ +V T Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNV-FFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVT-LKGLTNKKDISVST 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_HAEIG (Diaminopimelate epimerase OS=Haemophilus influenzae (strain PittGG) GN=dapF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.477e-15 Identity = 45/101 (44.55%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD TPE +L +R+ GIG D ++ P D+ RIFN+DGSE CGNG RCFARF+ L+ L K+ +V T Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNV-FFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVT-LKGLTNKKDISVST 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_HAEI8 (Diaminopimelate epimerase OS=Haemophilus influenzae (strain 86-028NP) GN=dapF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.477e-15 Identity = 45/101 (44.55%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD TPE +L +R+ GIG D ++ P D+ RIFN+DGSE CGNG RCFARF+ L+ L K+ +V T Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNV-FFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVT-LKGLTNKKDISVST 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_ENT38 (Diaminopimelate epimerase OS=Enterobacter sp. (strain 638) GN=dapF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.477e-15 Identity = 44/101 (43.56%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD + +PE +L DR+ G+G D ++ P + D+ RIFN+DGSE CGNG RCFARF+ L+ L K+ V T Sbjct: 1 MQFSKMHGLGNDFMVVD-AVTQNVFFSPELIRRLADRHVGVGFDQLLVVEPPYDPDLDFHYRIFNADGSEVSQCGNGARCFARFV-RLKGLTNKRDICVST 99 The following BLAST results are available for this feature:
BLAST of FC876448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876448 ID=FC876448; Name=FC876448; organism=Citrus clementina; type=EST; length=625bpback to top |