FC876448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_CLOAB (Diaminopimelate epimerase OS=Clostridium acetobutylicum GN=dapF PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.931e-15 Identity = 46/111 (41.44%), Postives = 65/111 (58.56%), Query Frame = 2 Query: 311 RESGFL---HFVKYHGLGNDFILVDNRNST---EPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 RE F+ + +K HG GNDFIL+D N+ + + A + C+R IG DG++F + D MRIFN+DGSE EMCGNG+RC R++ E+ N K+S + T Sbjct: 6 REDAFIVEINILKCHGTGNDFILIDEYNNNYNLDDETRRDIAIQACNRAKFIGGDGILFVQKS-DICDAKMRIFNADGSEAEMCGNGLRCVGRYVIEMLN---KESVEIET 112
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_VESOH (Diaminopimelate epimerase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=dapF PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.746e-15 Identity = 43/101 (42.57%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 ++F K HGLGNDF++VDN + + ++ L +R FGIG D ++ + G D+ I+NS+GSE E CGNG RCFARF+ +NL TV T Sbjct: 3 INFTKMHGLGNDFMVVDNL-AGDITFNAKKITNLANRAFGIGFDQLLVVETSNIRGVDFRYVIYNSNGSEVEQCGNGARCFARFV-NYKNLTHSNPITVKT 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_HAEPS (Diaminopimelate epimerase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=dapF PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.746e-15 Identity = 44/101 (43.56%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF+++D +T E K DR+ G+G D ++ P + D+ RIFN+DGSE CGNG RCFARF+ L+ L KQ V T Sbjct: 1 MQFSKMHGLGNDFMVIDGVTQNV-YLTEELIRKWADRHRGVGFDQLLLVEPPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVT-LKGLTNKQDIGVST 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_HAEDU (Diaminopimelate epimerase OS=Haemophilus ducreyi GN=dapF PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.746e-15 Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF+++D +T + KL DR++G+G D ++ P + D+ RIFN+DGSE CGNG RCFARF++ L+ L + V T Sbjct: 1 MQFSKMHGLGNDFMVIDGVTQNV-YLTEDMIRKLADRHYGVGFDQLLLVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVS-LKGLINRSDMYVST 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_PHOPR (Diaminopimelate epimerase OS=Photobacterium profundum GN=dapF PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.012e-14 Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNG-TDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 ++F K HGLGNDF++VD +P +L DR+ GIG D ++ P + TD+ RIFN+DGSE E CGNG RCFARF+ ++ L K V T Sbjct: 3 INFSKMHGLGNDFMVVDCVTQNV-FFSPAAIRRLADRHRGIGFDQLLVVEPPYDPETDFHYRIFNADGSEVEQCGNGARCFARFV-WMKGLTNKYQVAVST 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_LEGPL (Diaminopimelate epimerase OS=Legionella pneumophila (strain Lens) GN=dapF PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.012e-14 Identity = 45/101 (44.55%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADG-VIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDFI++D N + ++T EQ +KL +R+ GIG D ++ G D+ RIFN+DG E CGNG RC A F A L K TV T Sbjct: 3 IKFTKMHGLGNDFIVLDGVNQSI-QLTVEQIQKLANRHTGIGFDQCLLIESSQTEGIDFNYRIFNADGQEVGQCGNGARCIALF-ARYYGLTAKNKLTVAT 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_LEGPH (Diaminopimelate epimerase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=dapF PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.012e-14 Identity = 45/101 (44.55%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADG-VIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDFI++D N + ++T EQ +KL +R+ GIG D ++ G D+ RIFN+DG E CGNG RC A F A L K TV T Sbjct: 3 IKFTKMHGLGNDFIVLDGVNQSI-QLTVEQIQKLANRHTGIGFDQCLLIESSQTEGIDFNYRIFNADGQEVGQCGNGARCIALF-ARYYGLTAKNKLTVAT 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_LEGPC (Diaminopimelate epimerase OS=Legionella pneumophila (strain Corby) GN=dapF PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.012e-14 Identity = 45/101 (44.55%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADG-VIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDFI++D N + ++T EQ +KL +R+ GIG D ++ G D+ RIFN+DG E CGNG RC A F A L K TV T Sbjct: 3 IKFTKMHGLGNDFIVLDGVNQSI-QLTVEQIQKLANRHTGIGFDQCLLIESSQTEGIDFNYRIFNADGQEVGQCGNGARCIALF-ARYYGLTAKNKLTVAT 101
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_ENTS8 (Diaminopimelate epimerase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=dapF PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.012e-14 Identity = 43/101 (42.57%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD + +P+ +L DR+ G+G D ++ P + D+ RIFN+DGSE CGNG RCFARF+ L+ L K+ V T Sbjct: 1 MQFSKMHGLGNDFMVVD-AVTQNVFFSPDMIRRLADRHQGVGFDQLLVVEPPYDPDLDFHYRIFNADGSEVAQCGNGARCFARFV-RLKGLTNKREIRVST 99
BLAST of FC876448 vs. ExPASy Swiss-Prot
Match: DAPF_EDWI9 (Diaminopimelate epimerase OS=Edwardsiella ictaluri (strain 93-146) GN=dapF PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.012e-14 Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 326 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHT 625 + F K HGLGNDF++VD + +PE +L DR+ G+G D ++ P + D+ RIFN+DGSE CGNG RCFARF+ ++ L ++ V T Sbjct: 1 MQFAKMHGLGNDFMVVD-AVTQNVYFSPELIRRLADRHTGVGFDQLLVVEPPYDPDLDFHYRIFNADGSEVAQCGNGARCFARFV-RIKGLTNRRDIRVST 99 The following BLAST results are available for this feature:
BLAST of FC876448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876448 ID=FC876448; Name=FC876448; organism=Citrus clementina; type=EST; length=625bpback to top |