FC876449

Overview
NameFC876449
Unique NameFC876449
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length575
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6173 contig Ccv1_Contig6173:40..614. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876449 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 5.253e-49
Identity = 103/174 (59.20%), Postives = 121/174 (69.54%), Query Frame = 3
Query:   51 ITMSCFKGQYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGINVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAIWRAVLKIGPNEPSQLAINENANGLDRYAII 572
            ++M    G Y DEL+K A  I +PG+GILA DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VD+L E  ++PGI VDKG V LAG+N E+  QGLDGLA R   YY+ GARFA WR V+ I PN PS+LA+ E A GL RYA I
Sbjct:   32 VSMVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSI-PNGPSELAVKEAAWGLARYAAI 204          
BLAST of FC876449 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.405e-48
Identity = 101/165 (61.21%), Postives = 115/165 (69.70%), Query Frame = 3
Query:   78 YADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGINVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAIWRAVLKIGPNEPSQLAINENANGLDRYAII 572
            YADEL+K A  I +PG+GILA DES  T GKRL SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E  ++PGI VDKG V L G+N E+  QGLDGL+ R   YY+ GARFA WR V+ I PN PS LA+ E A GL RYA I
Sbjct:   51 YADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWGQGLDGLSSRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAI 214          
BLAST of FC876449 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.405e-48
Identity = 99/164 (60.37%), Postives = 119/164 (72.56%), Query Frame = 3
Query:   87 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGINVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAIWRAVLKIGPNEPSQLAINENANGLDRYAIIC 575
            EL   A  I   GKGILAADES GT+GKRL+ I +EN + +RR  R+LLF T P   +++ G+I F ET+YQKT  G PFV ++K+ G+L GI VDKG V LAGTNGE TTQGLDGLA+RC +Y + GA FA WR VLKI PN PS+L+I ENAN L RYA IC
Sbjct:   15 ELADIAQRIVASGKGILAADESVGTMGKRLTQIGLENTDEHRRFYRQLLFTTDPSIKEHIGGIIFFHETMYQKTDGGVPFVKLVKDNGILVGIKVDKGVVPLAGTNGEGTTQGLDGLAERCAQYKKDGADFAKWRCVLKISPNTPSRLSIVENANVLARYATIC 178          
BLAST of FC876449 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 190.66 bits (483), Expect = 4.447e-48
Identity = 101/165 (61.21%), Postives = 117/165 (70.91%), Query Frame = 3
Query:   78 YADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGINVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAIWRAVLKIGPNEPSQLAINENANGLDRYAII 572
            YADEL+K A  + +PG+GILA DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E G++PGI VDKG + L G+N E+  QGLDGLA R   YY+ GARFA WR V+ I PN PS LA+ E A GL RYA I
Sbjct:   49 YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAI 212          
BLAST of FC876449 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 4.447e-48
Identity = 101/167 (60.48%), Postives = 116/167 (69.46%), Query Frame = 3
Query:   72 GQYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGINVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAIWRAVLKIGPNEPSQLAINENANGLDRYAII 572
            G YADEL+K A  I +PG+GILA DES  T GKRL SI +EN EANR+A R LL   P   +Y+SG ILFEETLYQ T  G+  VDVL E  ++PGI VDKG V LAG+N E+  QGLDGLA R   YY+ GARFA WR V+ I PN PS LA+ E A GL RYA I
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAI 166          
BLAST of FC876449 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.690e-47
Identity = 100/167 (59.88%), Postives = 116/167 (69.46%), Query Frame = 3
Query:   72 GQYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGINVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAIWRAVLKIGPNEPSQLAINENANGLDRYAII 572
            G YADEL+K A  I +PG+GILA DES  T GKRL+SI +EN E NR+A R LL   P   +Y+SG ILFEETLYQ T  G+  VDVL E  ++PGI VDKG V LAG+N E+  QGLDGLA R   YY+ GARFA WR V+ I PN PS LA+ E A GL RYA I
Sbjct:    7 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAI 172          
BLAST of FC876449 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 4.917e-47
Identity = 100/165 (60.61%), Postives = 114/165 (69.09%), Query Frame = 3
Query:   78 YADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGINVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAIWRAVLKIGPNEPSQLAINENANGLDRYAII 572
            YADEL+K A  I +PG GI+A DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E  ++PGI VDKG V L G+  E+  QGLDGLA R   YY+ GARFA WR V+ I PN PS LA+ E A GL RYA I
Sbjct:   52 YADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAI 215          
BLAST of FC876449 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.422e-47
Identity = 97/167 (58.08%), Postives = 118/167 (70.66%), Query Frame = 3
Query:   72 GQYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGINVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAIWRAVLKIGPNEPSQLAINENANGLDRYAII 572
            G Y+DEL+K A  I +PG+GILA DES  T GKRL+SI ++N E NR+A R+LL  TPG   Y+SG ILFEETLYQ T  GK FVD L++  ++PGI VDKG   LAG+N E+  QGLDGLA R  +YY+ GARFA WR V+ + P  PS LA+ E A GL RYA I
Sbjct:   42 GAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSV-PCGPSALAVKEAAWGLARYAAI 207          
BLAST of FC876449 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 8.387e-47
Identity = 98/159 (61.64%), Postives = 115/159 (72.33%), Query Frame = 3
Query:  102 AAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGINVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAIWRAVLKIGPNEPSQLAINENANGLDRYAIIC 575
            A  I   GKGILAADES GT+G RL  INVEN E NRRA RE+LF +  ++ + + GVILF ETLYQK ++GKPF  ++KE G++ GI +D GT  LAGTNGETT QGLD LA+RC +Y + GA F  WRAVLKI    PSQLAI ENAN L RYA IC
Sbjct:   20 AQRIVASGKGILAADESVGTMGNRLQRINVENTEENRRAFREILFSSDASISKSIGGVILFHETLYQKDSSGKPFPAIIKEKGMVVGIKLDAGTAPLAGTNGETTIQGLDKLAERCAQYKKDGADFGKWRAVLKISSTTPSQLAIQENANTLARYASIC 178          
BLAST of FC876449 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 5.436e-46
Identity = 98/164 (59.76%), Postives = 116/164 (70.73%), Query Frame = 3
Query:   87 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGINVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAIWRAVLKIGPNEPSQLAINENANGLDRYAIIC 575
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQK   G PF  ++K+ G++ GI VDKG V LAGTNGETTTQGLDGL++RC +Y + GA FA WR+VLKI    PS+LAI ENAN L RYA IC
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFTADERMDKCIGGVIFFHETLYQKADDGTPFAKMIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISETSPSELAIMENANVLARYASIC 178          
The following BLAST results are available for this feature:
BLAST of FC876449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC_ORYSJ5.253e-4959.20Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_ARATH3.405e-4861.21Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALF1_LAMJA3.405e-4860.37Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALFC_SPIOL4.447e-4861.21Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC2_PEA4.447e-4860.48Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC1_PEA1.690e-4759.88Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC1_ARATH4.917e-4760.61Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC3_ARATH6.422e-4758.08Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALDOB_CHICK8.387e-4761.64Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALDOC_CARAU5.436e-4659.76Fructose-bisphosphate aldolase C OS=Carassius aura... [more]

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Properties
Property NameValue
Genbank descriptionC32004H08EF DevOvary1 Citrus clementina cDNA clone C32004H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876449 ID=FC876449; Name=FC876449; organism=Citrus clementina; type=EST; length=575bp
TCGCTCTCTCTGTTCTCCCTCTAAAAAACAAATTTTCTATCTTCAAGTAG
ATCACCATGTCTTGCTTCAAGGGCCAATACGCCGATGAGCTCATTAAAAA
CGCTGCCTACATTGGCACCCCTGGAAAGGGTATCCTTGCTGCTGATGAGT
CAACAGGCACCATTGGCAAGCGTCTATCCAGCATCAATGTTGAGAATGTT
GAGGCAAACAGGCGTGCTCTCCGCGAGCTCCTTTTCTGCACTCCCGGTGC
CCTTCAGTACCTCAGTGGTGTCATCCTCTTCGAGGAGACCCTCTACCAGA
AGACTGCTGCTGGCAAGCCCTTTGTTGATGTCTTGAAGGAGGGTGGAGTC
CTCCCTGGAATTAACGTTGACAAGGGTACTGTTGAGCTTGCTGGTACCAA
TGGTGAGACCACCACCCAGGGTCTTGATGGCCTCGCCCAGCGCTGCCAGA
AATACTATGAAGCTGGTGCTCGTTTTGCCATATGGCGTGCTGTTCTTAAG
ATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAATGAGAATGCCAATGG
CCTGGACCGATATGCTATCATCTGC
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