FC876452

Overview
NameFC876452
Unique NameFC876452
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:3..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.541e-15
Identity = 42/143 (29.37%), Postives = 75/143 (52.45%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNL 588
            PPGP P PIVGNL  + P+  +     A+++GP++ + +G              + LK HD   ++R  N   +  + N QD+++  YGP +  +RK+ ++ LF+ K L+  R +R++E+  +  ++      P N A+ L L
Sbjct:   28 PPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQL 170          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.541e-15
Identity = 45/123 (36.59%), Postives = 64/123 (52.03%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVL 528
            PPGP   PI+GNL  LG +PHQS+A LA+ HGP+M L+LG              + LK  D  FS R      +   +    I F      WR LR+I S ++FS  +L+  +H+R +++  L
Sbjct:   29 PPGPTRLPIIGNLHLLGALPHQSLAKLAKIHGPIMSLQLGQITTLVISSATAAEEVLKKQDLAFSTRNVPDAVRAYNHERHSISFLHVCTEWRTLRRIVSSNIFSNSSLEAKQHLRSKKVEEL 151          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.541e-15
Identity = 46/159 (28.93%), Postives = 74/159 (46.54%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT----EPVNLAQRLNLCVVNALGRVMLG 624
            PP P   P++GNL  L    H+S+  L+  +GPLM L  G                LK +D   +NRP       I    +D+ F PYG  W+ ++ I   +L S K +  Y+ +R++E+ ++   + +A +     PVNL+Q       + + R  LG
Sbjct:   34 PPSPWRLPVIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQLFMTLTNDIICRAALG 192          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.931e-15
Identity = 48/159 (30.19%), Postives = 85/159 (53.46%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVL---TRALASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            PPGP   P++G+L  L G +P  ++A +A+ +GP+ +++LG              + +K+ D   ++R  + G K + Y+  DI+F PY   WR +RKI    L S + +  +  +RQ+E++ L    R+ A+AG E V+L +R+     + + R   G
Sbjct:   36 PPGPPKLPLIGHLHLLWGKLPQHALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAG-EAVDLTERIATLTCSIICRAAFG 193          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.726e-14
Identity = 46/158 (29.11%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  160 PPGPK-PWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLG 624
            PP P    PI+G++  LGP+ HQS   L+  +GPL  L  G              Q L+ ++  F+ R  ++  K + Y    + F PYG  WR ++K+S   L   +++++++H+R +E   L R L++     E VN+ + L     N +  +M+G
Sbjct:   33 PPSPFFRLPIIGHMHMLGPLLHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTYE-SSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEELLKLTNNVISIMMVG 189          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14
Identity = 43/156 (27.56%), Postives = 81/156 (51.92%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRP-YGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG--TEPVNLAQRLNLCVVNALGRVM 618
            PPGP   PI+GN+  +G  PH+S A L++T+GP+M L+LG              + L+ HD   S R P +  + I +    +V+ P    RWR+LR++S   L S + ++  + +R  ++  L   ++ +    E V++++   +  +N +  ++
Sbjct:   39 PPGPPRLPIIGNIHLVGKHPHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDREESVDISRVAFITTLNIISNIL 194          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14
Identity = 47/161 (29.19%), Postives = 78/161 (48.45%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGP--LMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAV----LTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 624
            P  P   PIVG+L H+GP  H S+  L   +G    ++LR G                ++ HD   ++RP +  +  + YN  D+ F P G  W+  RK+ + HL S K +  +RH R+EE+ +    L  A A + +  V++++ L     + + R +LG
Sbjct:   58 PSPPGTLPIVGHLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAKSPSTAVDMSEVLAAYTNDVVSRSVLG 218          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.844e-14
Identity = 44/156 (28.21%), Postives = 77/156 (49.36%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVF-RPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVM 618
            PPGP   PI+GN+  +G  PH S A LA+ +GP+M L+ G              + L+ HD   S R  N   +   +    +++  P   RWRMLRK+S   +FS +  +  + +R +++  L   +  +S   E V++++     V+N +  ++
Sbjct:   39 PPGPPRLPIIGNIHQVGKNPHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEVSVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNESSERKEAVDISRASYTTVLNIISNIL 194          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 8.564e-14
Identity = 47/142 (33.10%), Postives = 72/142 (50.70%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQ---EEMAVLTRALASAGTEPVNLAQ 576
            PPGP   P+VGN+  LG  PH+S+A  ++T+GP+M L+LG              + L+ HD   S R  N   +   ++   IV+ P   RWR L+K  + +L S + LD  + +R    EE+  L       G E ++LA+
Sbjct:   39 PPGPPILPLVGNIFQLGFNPHRSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNEFRERG-EAIDLAR 179          
BLAST of FC876452 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.492e-13
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = 1
Query:  160 PPGPKPWPIVGNLPHLGP-MPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL---ASAGTEPVNLAQRLNLCVVNALGRVM 618
            PPGP P P+ GN   +G  + H+++  LA+  G ++ LR+G              + L      F +R  N          QD+VF  YG  WR +R+I +V  F+ K +  YR+  +EE A +   +     A T  + L +RL L + N + R+M
Sbjct:   34 PPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAATHGIVLRRRLQLMMYNNMYRIM 190          
The following BLAST results are available for this feature:
BLAST of FC876452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
C98A3_ARATH4.541e-1529.37Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU4.541e-1536.597-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C71AJ_ARATH4.541e-1528.93Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71DD_MENPI5.931e-1530.19Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C93B1_GLYEC1.726e-1429.11Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C76C1_ARATH2.943e-1427.56Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71C3_MAIZE2.943e-1429.19Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C76C4_ARATH3.844e-1428.21Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH8.564e-1433.10Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_POPTM2.492e-1329.94Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]

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Properties
Property NameValue
Genbank descriptionC32004H11EF DevOvary1 Citrus clementina cDNA clone C32004H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876452 ID=FC876452; Name=FC876452; organism=Citrus clementina; type=EST; length=624bp
GGACTACTCGTACCATTTCTACGCTTTCTCTGGGAAACGAAACAAAGAGC
AATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTG
TCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCC
CACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCC
TCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCC
ACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCC
GCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTT
CTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATC
AGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAG
ATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCA
CGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGCAG
GAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGAAT
GCCCTAGGGCGGGTGATGCTAGGC
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