FC876453

Overview
NameFC876453
Unique NameFC876453
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:5..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876453 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28
Identity = 71/178 (39.89%), Postives = 101/178 (56.74%), Query Frame = 3
Query:  162 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSDRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 695
            +Y  +CP+AE I+R  V+  +      +   LR  FHDC VQ CD S+L+       +E+    + G+R    I++ K  +E  CPGVVSCADIL L+ RD V    GP   + TGR+DGR S A      LP   DS++V  ++F   G+D   LV LLG+H++G+T C+   +RLY
Sbjct:   33 YYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKS---AEQAALPNLGLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEASN-LPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFFRYRLY 206          
BLAST of FC876453 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28
Identity = 73/187 (39.04%), Postives = 104/187 (55.61%), Query Frame = 3
Query:  147 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSDRDGVVALGGPYIPLKTGRRDGRK-SRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP 698
            GL  NFY+  CP+ E+IIR+++K ++KR    A + LR  FHDC VQ C+AS+LL  +     E+    +  +R   F  I N++  V+++C  VVSC+DIL L+ RD VV  GGP   +  GRRD    +  E     LP    + S ++  FA   ++   LVAL G H++G  HC     RLYP
Sbjct:   43 GLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYP 229          
BLAST of FC876453 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28
Identity = 64/174 (36.78%), Postives = 96/174 (55.17%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSDRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHC 671
            L  NFY  +C  AE ++R  V+             LR  FHDC VQ CDAS+L+       +EK    +  +  F  I+  K A+E  CP  VSCADI+ L+ RD V A GGP + + TGRRDG++S A  +   + D + ++  +++ F++ G+    LV L G+H++G +HC
Sbjct:   29 LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNS---TEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHC 199          
BLAST of FC876453 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28
Identity = 72/193 (37.31%), Postives = 99/193 (51.30%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTL-SEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSDRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPELTCTEPD 722
            L   FY  TCP    I+R  V+   +       S +R  FHDC V  CD SLLLD+   T+ SEK+ +  +   R F  ++NIK AVE  CPGVVSC DIL L+    V   GGP   +  GRRD R +        LP   ++++ + ++F  +G++   LVAL G+H+ GR  C     RL+       PD
Sbjct:   25 LSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPD 217          
BLAST of FC876453 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27
Identity = 73/189 (38.62%), Postives = 99/189 (52.38%), Query Frame = 3
Query:  159 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSDRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPELTCTEPD 722
            + Y  +CP    I+R+QV +  K     A S +R  FHDC V  CDASLLLD      SEK  +      R F  I+ IK AVE  CPGVVSCADIL L+ RD VV  GGP   +  GR+DG  +        LP   + +  ++ +F A+ ++   +VAL G+H+ G+  C    +RL+       PD
Sbjct:   33 DIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGAD---SEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPD 217          
BLAST of FC876453 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.356e-27
Identity = 73/185 (39.46%), Postives = 93/185 (50.27%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSDRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE 701
            L  NFY   CP A   I+  V     +      S LR  FHDC VQ CDAS+LLD T     EK     +  +R F  I+ IK  VE  CPGVVSCADIL ++ RD VVALGG    +  GRRD   +        LP    ++S ++  F+  G     LV L G+H++G+  C     R+Y E
Sbjct:   24 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNE 208          
BLAST of FC876453 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27
Identity = 69/181 (38.12%), Postives = 100/181 (55.25%), Query Frame = 3
Query:  159 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSDRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY 695
            +FY  TCPQ  DI    +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE+ CP  VSCAD+L ++ ++ VV  GGP   +  GRRD  +   ++    LP    +++ + +RF  +G+D A  LVAL G H+ G+  C  ++ RLY
Sbjct:   27 SFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLY 207          
BLAST of FC876453 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27
Identity = 69/187 (36.90%), Postives = 102/187 (54.55%), Query Frame = 3
Query:  141 DPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSDRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY 695
            D  L   FY  +CP   +I+R+ +    +       S LR  FHDC V  CDAS+LLD+T   L+EK+ +  +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + FA +G+D P  LVAL G H+ G+  C  ++ RLY
Sbjct:   27 DAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLY 213          
BLAST of FC876453 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.313e-27
Identity = 67/183 (36.61%), Postives = 102/183 (55.74%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSDRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 695
            L + FY+ +C  AE I++++V+  + R    A   +R  FHDC V+ CD S+L+DST    +EK+   +   +R F  I++ K  +E  C GVVSCADI+  + RD V   GG    +  GRRDGR S A      LP    ++  + + F+  G+    +V L G+H++GR+HC    +RLY
Sbjct:   61 LQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLY 243          
BLAST of FC876453 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.313e-27
Identity = 68/184 (36.96%), Postives = 103/184 (55.98%), Query Frame = 3
Query:  150 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSDRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY 695
            L   FY ++CP   +I+R+ +    +   + A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD R++  ++    LP  + ++  +   FA +G++ P  LVAL G H+ G+  C  ++ RLY
Sbjct:   11 LTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLY 194          
The following BLAST results are available for this feature:
BLAST of FC876453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER25_ARATH4.661e-2839.89Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER12_ARATH4.661e-2839.04Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER46_ARATH7.951e-2836.78Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER15_IPOBA7.951e-2837.31Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER59_ARATH1.038e-2738.62Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER1_ARAHY1.356e-2739.46Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER37_ARATH1.771e-2738.12Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER1B_ARMRU1.771e-2736.90Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER5_VITVI2.313e-2736.61Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER1C_ARMRU2.313e-2736.96Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]

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Properties
Property NameValue
Genbank descriptionC32004H12EF DevOvary1 Citrus clementina cDNA clone C32004H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876453 ID=FC876453; Name=FC876453; organism=Citrus clementina; type=EST; length=722bp
GGAGATCTAAACCAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAG
AAAATGGGTACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTC
AGCTGTGTCTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTC
TTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATC
AGGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTC
TTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTT
CACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGAC
AGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGC
TGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCC
TGTCCGATAGAGATGGCGTTGTTGCGCTTGGAGGCCCATACATTCCTCTC
AAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCA
GTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTG
CAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCAC
AGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGA
GTTGACCTGCACTGAACCTGAC
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