FC876454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_ANTFO (50S ribosomal protein L2, chloroplastic OS=Anthoceros formosae GN=rpl2 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.840e-41 Identity = 82/134 (61.19%), Postives = 103/134 (76.87%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAV---DSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 M I Y+ T TRN +V + +V+S P+ L + QH C KGRN RGIIT+ HRGGGHKR+YRKIDF R++KDI+GRI TIEYDPNRN +ICL +Y DGEK+YIL+P+G IGD++VS TE PI +GNALPL+ Sbjct: 1 MVIRSYRAYTLGTRNRSVFEFEKKVRSKPQKKLTFRQH-CKKGRNNRGIITSRHRGGGHKRIYRKIDFLRDKKDIFGRIATIEYDPNRNTFICLTYYEDGEKKYILYPQGMRIGDSVVSSTEAPISIGNALPLT 133
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_MARPO (50S ribosomal protein L2, chloroplastic OS=Marchantia polymorpha GN=rpl2 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.403e-41 Identity = 86/134 (64.18%), Postives = 100/134 (74.63%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAV---DSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 MAI LY+ TP TRN +V D VK P+ L Y +H KGRN RGIIT+ HRGGGHKRLYRKIDF+RN+K I G+I TIEYDPNRN YICLI+Y DGEKRYIL+PRG + DTI+S E PI +GN LPL+ Sbjct: 1 MAIRLYRAYTPGTRNRSVPKFDEIVKCQPQKKLTYNKH-IKKGRNNRGIITSQHRGGGHKRLYRKIDFQRNKKYITGKIKTIEYDPNRNTYICLINYEDGEKRYILYPRGIKLDDTIISSEEAPILIGNTLPLT 133
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_HUPLU (50S ribosomal protein L2, chloroplastic OS=Huperzia lucidula GN=rpl2 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.531e-40 Identity = 84/135 (62.22%), Postives = 99/135 (73.33%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQ----VKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 MAI Y+ TP R+ V S V+ P+ LI G C KGRN RGIIT+ HRGGGHKRLYR+IDFRR+++ I GRIVT+EYDPNRNAYICL+HY DGEK+YILHP G IGDTI+SG I +GNALPL+ Sbjct: 1 MAIRFYRDYTPGARDRLVVSSSEGTVRFKPQKKLISG-FTCRKGRNNRGIITSRHRGGGHKRLYRQIDFRRSKRGISGRIVTVEYDPNRNAYICLVHYEDGEKKYILHPGGIKIGDTIISGPMATILIGNALPLT 134
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_ZYGCR (50S ribosomal protein L2, chloroplastic OS=Zygnema circumcarinatum GN=rpl2 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.729e-40 Identity = 85/134 (63.43%), Postives = 97/134 (72.39%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAV---DSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 M I YK TP TRN +V + V+S P L GQHR KGRN RG+IT+ HRGGGHKRLYR IDF+R++ + GRIV+IEYDPNRNA ICLI Y DGEKRYILHPRG IGD I+S T PI GNALPL+ Sbjct: 1 MGIRSYKAYTPGTRNRSVSQFEEIVQSKPEKQLTSGQHR-KKGRNNRGVITSRHRGGGHKRLYRHIDFKRDKYGMLGRIVSIEYDPNRNARICLISYQDGEKRYILHPRGISIGDQILSDTHAPISPGNALPLT 133
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_STAPU (50S ribosomal protein L2, chloroplastic OS=Staurastrum punctulatum GN=rpl2 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.539e-38 Identity = 81/134 (60.45%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAV---DSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLS 435 M I YK TP TRN +V + ++ P L YGQHR KGRN RGIIT+ HRGGGHKRLYR+IDFRRN++ I G I TIEYDPNR A ICL Y DGEKRYIL PRG IGD I++ + PI GN LPL+ Sbjct: 1 MGIRSYKAYTPGTRNRSVSQFEEIIQIKPEKKLTYGQHR-QKGRNNRGIITSRHRGGGHKRLYRQIDFRRNKQGIIGEIQTIEYDPNRKARICLTQYSDGEKRYILQPRGIRIGDQILASPDAPIVAGNTLPLT 133
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_PSINU (50S ribosomal protein L2, chloroplastic OS=Psilotum nudum GN=rpl2 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.234e-38 Identity = 76/136 (55.88%), Postives = 97/136 (71.32%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAV---DSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MAI Y+ TP TR+ +V + K P+ L +H KGRN RGIIT+ HRGGGHKR+YR+IDFRRN D G+I TIEYDPNRN+YIC+++Y +G+KRYILHP+G +GD I SGTE PI GN +PL+ + Sbjct: 1 MAIRSYRAYTPGTRHRSVSTFEEISKYKPKKRLTLNKHS-KKGRNNRGIITSRHRGGGHKRIYREIDFRRNNNDAPGKIATIEYDPNRNSYICIVNYENGDKRYILHPKGLNVGDLIFSGTEAPISNGNTIPLTKI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_CHLAT (50S ribosomal protein L2, chloroplastic OS=Chlorokybus atmophyticus GN=rpl2 PE=3 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 2.749e-37 Identity = 75/136 (55.15%), Postives = 99/136 (72.79%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQV---KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 M I LY+ TP TR +V +S P +L YG+HR +GRN RGIIT+ HRGGGHKRL R+IDFRR++ I R+ TIEYDPNRN I L++Y DGEKRY+LHPRG ++G+ I++G + P+++GNALPLS + Sbjct: 1 MGIRLYRAYTPGTRFRSVSEFTDITRSKPEKSLTYGRHR-SQGRNNRGIITSRHRGGGHKRLSREIDFRRDKVGIPARVATIEYDPNRNCRIALLNYQDGEKRYVLHPRGLMVGEEIIAGPDAPLQLGNALPLSKI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_GRATL (50S ribosomal protein L2, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl2 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.689e-37 Identity = 76/136 (55.88%), Postives = 97/136 (71.32%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQ---VKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MAI LYK TP TRN + + P LI HR +GRN+RGIIT+ HRG GHKRLYR IDF+RN+ DI ++V+IEYDPNRNA I L+HY DGEKRYILHPR IG+T++SG + +++GN+LPL+ + Sbjct: 1 MAIRLYKAYTPGTRNRTISTFNEITNKKPEKTLIRKNHR-RQGRNSRGIITSRHRGKGHKRLYRTIDFKRNKYDIKAKVVSIEYDPNRNARIALLHYSDGEKRYILHPRSLNIGETVISGIKASLEVGNSLPLNYI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_PORYE (50S ribosomal protein L2, chloroplastic OS=Porphyra yezoensis GN=rpl2 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.969e-36 Identity = 75/136 (55.15%), Postives = 97/136 (71.32%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVD--SQVKSN-PRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MAI LY+ TP TRN V S++ ++ P +LI H C KGRN RG+IT H+GGGHK+ YR IDF+RN +I ++ +IEYDPNRNA I L+HY DGEKRYILHPR +G ++SG PI++GNALPLS++ Sbjct: 1 MAIRLYRAYTPGTRNRTVSTFSEITTDKPEKSLIVKHHFC-KGRNNRGVITCRHKGGGHKQQYRLIDFKRNRHNIVAKVASIEYDPNRNARIALLHYLDGEKRYILHPRSLSVGSMVLSGPTAPIEVGNALPLSSI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RK2_OLTVI (50S ribosomal protein L2, chloroplastic OS=Oltmannsiellopsis viridis GN=rpl2 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.184e-36 Identity = 76/136 (55.88%), Postives = 94/136 (69.12%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVD--SQVK-SNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 M I YK +TP TRN +V S++ S P +L + R KGRN RG+IT+ HRGGGHKRLYR IDF+RN+ I ++ TIEYDPNRNA I L+HY DGEKRYILHPRG +G +I+S P+ GNALPL + Sbjct: 1 MGIRFYKANTPGTRNRSVSDFSEITHSKPEKSLTFNVQRA-KGRNNRGVITSRHRGGGHKRLYRLIDFKRNKIGIAAKVATIEYDPNRNARIALLHYQDGEKRYILHPRGLNVGSSIISSLNAPVLTGNALPLKNI 135 The following BLAST results are available for this feature:
BLAST of FC876454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876454 ID=FC876454; Name=FC876454; organism=Citrus clementina; type=EST; length=903bpback to top |