FC876454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_MOOTA (50S ribosomal protein L2 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplB PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.251e-30 Identity = 69/136 (50.74%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVK---SNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MAI +K ++P R V + + + P L+ + G GRN +G +T HRGGGHKRLYR IDF+R++ I GR+ TIEYDPNR+A I LI+Y DGEKRYIL P +GD ++SG E IK+GNALPLS + Sbjct: 1 MAIKKFKPTSPGRRQMTVSTFAEITATEPYKPLVEPLKKTG-GRNNQGRLTVRHRGGGHKRLYRVIDFKRDKDGIPGRVATIEYDPNRSANIALINYADGEKRYILAPENLQVGDQVISGPEADIKVGNALPLSQI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_THEEB (50S ribosomal protein L2 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplB PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.470e-30 Identity = 68/137 (49.64%), Postives = 87/137 (63.50%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQVK---SNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEK-DIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 M I +Y+ TP R V + P +L G R KGRN RG+IT+ RGGGHKR YR +DFRR+ K +I ++ T+EYDPNRNA I L+HY DGEKRYILHPR G I++ + PI++GNALPL + Sbjct: 1 MGIRVYRPYTPGVRQKTVSDFAEITTDKPEKSLTRGFKR-DKGRNNRGVITSRRRGGGHKRRYRIVDFRRSSKLNIPAKVATVEYDPNRNARIALLHYRDGEKRYILHPRDLTPGTEIIASPDAPIEVGNALPLGKI 136
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_AYWBP (50S ribosomal protein L2 OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=rplB PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.470e-30 Identity = 69/132 (52.27%), Postives = 86/132 (65.15%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVD--SQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 MAI YK +T RN +V S++ + + H+ GRN +G IT HRGGG KR YR IDF+RN+ +I G++ TIEYDPNR+A I LIHY DGEKRYIL P+G +G IVSG E IK+ N LPL Sbjct: 1 MAIKKYKPTTNGCRNMSVSAFSEITTQTPERSLLVSHKDQAGRNNQGKITVRHRGGGVKRKYRLIDFKRNKDNIVGKVATIEYDPNRSANIALIHYVDGEKRYILAPKGLTVGMQIVSGKETDIKVANCLPL 132
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_RHOE4 (50S ribosomal protein L2 OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=rplB PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.237e-29 Identity = 71/139 (51.08%), Postives = 86/139 (61.87%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQV---KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKD-IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV*T 447 MAI YK +TP R +V +S P +L+ H G GRNA G IT H+GGGHKR YR IDFRRN+KD I ++ IEYDPNR A I L+HY DGEKRYI+ P+G + G + SG IK GN LPL + T Sbjct: 1 MAIRKYKPTTPGRRGSSVSDFAEITRSTPEKSLVRPLHGRG-GRNAHGRITTRHKGGGHKRAYRLIDFRRNDKDGIPAKVAHIEYDPNRTANIALLHYADGEKRYIIAPKGLVQGSPVESGAGADIKPGNNLPLRNIPT 138
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_ONYPE (50S ribosomal protein L2 OS=Onion yellows phytoplasma GN=rplB PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.237e-29 Identity = 69/132 (52.27%), Postives = 86/132 (65.15%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVD--SQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 MAI YK +T RN +V S++ + + H+ GRN +G IT HRGGG KR YR IDF+RN+ +I G++ TIEYDPNR+A I LIHY DGEKRYIL P+G +G IVSG E IK+ N LPL Sbjct: 1 MAIKKYKPTTNGCRNMSVSAFSEITTQTPEKRLLVSHKDQAGRNNQGKITVRHRGGGVKRKYRLIDFKRNKDNIVGKVATIEYDPNRSANIALIHYLDGEKRYILAPKGLTVGMQIVSGKEADIKVANCLPL 132
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_MYCCT (50S ribosomal protein L2 OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=rplB PE=3 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 1.237e-29 Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRN-GAVDSQV----KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MAI YK++T RN +D K+ P +L+ + GRN RG+IT H+GGGHK+ YR IDF+RN++DI+G I TIEYDPNRNA+ICL++Y DGEKRYIL +G +G +V+ IK+GN+ PL + Sbjct: 1 MAIKKYKSTTNGRRNMTTIDYSAVLTTKNTPEKSLVVSKSSKA-GRNNRGLITTRHKGGGHKQKYRIIDFKRNKRDIFGTISTIEYDPNRNAFICLVNYVDGEKRYILFAKGMQVGMKVVASENADIKVGNSAPLKNI 137
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_MESFL (50S ribosomal protein L2 OS=Mesoplasma florum GN=rplB PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.237e-29 Identity = 68/137 (49.64%), Postives = 91/137 (66.42%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRN-GAVDSQVK---SNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MAI YK +T RN ++D + S P +L+ ++ GRN RG+IT H+GGGHK+ YR IDF+RN++D+ G I TIEYDPNRNA+ICL++Y DGEKRYIL +G +G IV+ IK+GNA PL + Sbjct: 1 MAIKKYKPTTNGRRNMTSIDYKATLTTSTPEKSLLAAKNSKA-GRNNRGLITTRHKGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLDGEKRYILFAKGMTVGMKIVASEHADIKVGNAAPLKNI 136
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_CORK4 (50S ribosomal protein L2 OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=rplB PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.615e-29 Identity = 70/139 (50.36%), Postives = 86/139 (61.87%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAV---DSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKD-IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV*T 447 MAI YK +TP R +V D +S P +L+ H+ G GRN G IT H+GGGHKR YR IDFRRN+KD + ++ IEYDPNR A I L+HY DGEKRYI+ PR G + SG IK+GN LPL + T Sbjct: 1 MAIRKYKPTTPGRRQSSVSGFDELTRSTPEKSLLRPLHKTG-GRNVHGHITTRHKGGGHKRQYRLIDFRRNDKDGVPAKVAHIEYDPNRTANIALLHYFDGEKRYIIAPRNLKQGTVVESGANADIKVGNNLPLRNIPT 138
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_THEPX (50S ribosomal protein L2 OS=Thermoanaerobacter sp. (strain X514) GN=rplB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 69/133 (51.88%), Postives = 84/133 (63.16%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAV---DSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 M I +K ++P R V + K P +L+ + G GRN G IT HRGGGHKR YR IDF+R++ I G++ IEYDPNR AYI LIHY DGEKRYI+ P G +GD I SG V IK+GNALPL Sbjct: 1 MGIKSFKPTSPGRRQMTVLTFEEVTKDKPEKSLVVTLTKTG-GRNVYGRITVRHRGGGHKRKYRIIDFKRDKDGIPGKVAAIEYDPNRTAYIALIHYLDGEKRYIIAPYGLKVGDIIESGENVDIKVGNALPL 132
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_THEP3 (50S ribosomal protein L2 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rplB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 69/133 (51.88%), Postives = 84/133 (63.16%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAV---DSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 M I +K ++P R V + K P +L+ + G GRN G IT HRGGGHKR YR IDF+R++ I G++ IEYDPNR AYI LIHY DGEKRYI+ P G +GD I SG V IK+GNALPL Sbjct: 1 MGIKSFKPTSPGRRQMTVLTFEEVTKDKPEKSLVVTLTKTG-GRNVYGRITVRHRGGGHKRKYRIIDFKRDKDGIPGKVAAIEYDPNRTAYIALIHYLDGEKRYIIAPYGLKVGDIIESGENVDIKVGNALPL 132 The following BLAST results are available for this feature:
BLAST of FC876454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876454 ID=FC876454; Name=FC876454; organism=Citrus clementina; type=EST; length=903bpback to top |