FC876454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_MYCTU (50S ribosomal protein L2 OS=Mycobacterium tuberculosis GN=rplB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQV---KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKD-IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 MAI YK +TP R +V +S P +L+ H G GRNA G IT H+GGGHKR YR IDFRRN+KD + ++ IEYDPNR A I L+HY DGEKRYI+ P G GD + SG IK GN LPL Sbjct: 1 MAIRKYKPTTPGRRGASVSDFAEITRSTPEKSLVRPLHGRG-GRNAHGRITTRHKGGGHKRAYRMIDFRRNDKDGVNAKVAHIEYDPNRTARIALLHYLDGEKRYIIAPNGLSQGDVVESGANADIKPGNNLPL 133
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_MYCTA (50S ribosomal protein L2 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=rplB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQV---KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKD-IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 MAI YK +TP R +V +S P +L+ H G GRNA G IT H+GGGHKR YR IDFRRN+KD + ++ IEYDPNR A I L+HY DGEKRYI+ P G GD + SG IK GN LPL Sbjct: 1 MAIRKYKPTTPGRRGASVSDFAEITRSTPEKSLVRPLHGRG-GRNAHGRITTRHKGGGHKRAYRMIDFRRNDKDGVNAKVAHIEYDPNRTARIALLHYLDGEKRYIIAPNGLSQGDVVESGANADIKPGNNLPL 133
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_MYCBT (50S ribosomal protein L2 OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=rplB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQV---KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKD-IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 MAI YK +TP R +V +S P +L+ H G GRNA G IT H+GGGHKR YR IDFRRN+KD + ++ IEYDPNR A I L+HY DGEKRYI+ P G GD + SG IK GN LPL Sbjct: 1 MAIRKYKPTTPGRRGASVSDFAEITRSTPEKSLVRPLHGRG-GRNAHGRITTRHKGGGHKRAYRMIDFRRNDKDGVNAKVAHIEYDPNRTARIALLHYLDGEKRYIIAPNGLSQGDVVESGANADIKPGNNLPL 133
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_MYCBP (50S ribosomal protein L2 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=rplB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQV---KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKD-IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 MAI YK +TP R +V +S P +L+ H G GRNA G IT H+GGGHKR YR IDFRRN+KD + ++ IEYDPNR A I L+HY DGEKRYI+ P G GD + SG IK GN LPL Sbjct: 1 MAIRKYKPTTPGRRGASVSDFAEITRSTPEKSLVRPLHGRG-GRNAHGRITTRHKGGGHKRAYRMIDFRRNDKDGVNAKVAHIEYDPNRTARIALLHYLDGEKRYIIAPNGLSQGDVVESGANADIKPGNNLPL 133
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_MYCBO (50S ribosomal protein L2 OS=Mycobacterium bovis GN=rplB PE=3 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQV---KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKD-IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 MAI YK +TP R +V +S P +L+ H G GRNA G IT H+GGGHKR YR IDFRRN+KD + ++ IEYDPNR A I L+HY DGEKRYI+ P G GD + SG IK GN LPL Sbjct: 1 MAIRKYKPTTPGRRGASVSDFAEITRSTPEKSLVRPLHGRG-GRNAHGRITTRHKGGGHKRAYRMIDFRRNDKDGVNAKVAHIEYDPNRTARIALLHYLDGEKRYIIAPNGLSQGDVVESGANADIKPGNNLPL 133
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_ELUMP (50S ribosomal protein L2 OS=Elusimicrobium minutum (strain Pei191) GN=rplB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 66/136 (48.53%), Postives = 87/136 (63.97%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVD--SQVKSN-PRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 M I ++ TPS R V S++ + P L+ G + G GRN G+I H GGGHKR YR+IDF+R + + ++ TIEYDPNRNA ICL+HY DG+KRYI+HP G IGD ++SG IK+GN LPL + Sbjct: 1 MPIKTFRPYTPSRRTITVADFSEITTKTPEKRLVKGLRKTG-GRNNTGMIMVRHIGGGHKRAYRQIDFKREKYGVPAKVATIEYDPNRNARICLLHYADGDKRYIIHPVGLKIGDEVMSGPNAEIKVGNCLPLKNI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_PELTS (50S ribosomal protein L2 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=rplB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.755e-29 Identity = 66/136 (48.53%), Postives = 89/136 (65.44%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAV---DSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MAI +K ++P R V + ++ P +L+ + G GRNA+G IT HRGGGHKRLYR IDF+R++ I ++ +IEYDPNR+A I L+HY DGEKRYI+ P G +G T+VSG + IK GN LPL + Sbjct: 1 MAIKKFKPTSPGRRFVTVSDFEEITRTEPEKSLVEPLKKSG-GRNAQGRITVRHRGGGHKRLYRIIDFKRDKDGIPAKVASIEYDPNRSARIALLHYADGEKRYIIAPAGLEVGQTVVSGPDADIKAGNCLPLKNI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_MYCMM (50S ribosomal protein L2 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=rplB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.755e-29 Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQV---KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKD-IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 MAI YK +TP R +V +S P +L+ H G GRNA G IT H+GGGHKR YR IDFRRN+KD + ++ IEYDPNR A I L+HY DGEKRYI+ P G GD + SG IK GN LPL Sbjct: 1 MAIRKYKPTTPGRRGASVSDFAEITRSTPEKSLVRPLHGHG-GRNAHGRITTRHKGGGHKRAYRVIDFRRNDKDGVNAKVAHIEYDPNRTARIALLHYLDGEKRYIIAPNGLSQGDVVESGANADIKPGNNLPL 133
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_GLOVI (50S ribosomal protein L2 OS=Gloeobacter violaceus GN=rplB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.755e-29 Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTR--NGAVDSQV-KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 M I Y+ TP TR +GA ++V KS P L HR +GRN +G+IT+ RGGGHKRLYR IDF+R+++ I ++ IEYDPNRNA I L+ Y DGEKRYILHP G +G I +G + PI++G ALPL Sbjct: 1 MGIRKYRPMTPGTRQRSGADFAEVTKSKPEKKLTKYVHR-KQGRNNQGVITSRFRGGGHKRLYRFIDFKRDKRGIPAEVLAIEYDPNRNARIALVQYTDGEKRYILHPVGLKVGARISAGEDAPIELGCALPL 132
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_RHOOB (50S ribosomal protein L2 OS=Rhodococcus opacus (strain B4) GN=rplB PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.138e-29 Identity = 70/139 (50.36%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAVDSQV---KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKD-IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV*T 447 MAI YK +TP R +V +S P +L+ H G GRNA G IT H+GGGHKR YR IDFRRN+KD + ++ IEYDPNR A I L+HY DGEKRYI+ P+G G + SG IK GN LPL + T Sbjct: 1 MAIRKYKPTTPGRRGSSVSDFAEITRSTPEKSLVRPLHGRG-GRNAHGRITTRHKGGGHKRAYRLIDFRRNDKDGVPAKVAHIEYDPNRTARIALLHYADGEKRYIIAPKGLFQGAPVESGAGADIKPGNNLPLRNIPT 138 The following BLAST results are available for this feature:
BLAST of FC876454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876454 ID=FC876454; Name=FC876454; organism=Citrus clementina; type=EST; length=903bpback to top |