FC876454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_RICB8 (50S ribosomal protein L2 OS=Rickettsia bellii (strain OSU 85-389) GN=rplB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.152e-25 Identity = 67/133 (50.38%), Postives = 82/133 (61.65%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGA-VD--SQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 MA+ + TPS R VD S K P L G + G GRN +G IT+ RGGGHKRLYR IDF+RN+ DI + IEYDPNR A+I LI Y DGE YIL P+ ++GD I+S + IK+GN LPL Sbjct: 1 MALKSFNPITPSLRELVQVDRTSLWKGRPFKALTKGISKTG-GRNNQGRITSWQRGGGHKRLYRVIDFKRNKLDISAIVERIEYDPNRTAFIALIKYEDGEHAYILAPQKLVVGDKIISSKDADIKIGNCLPL 132
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_GEOSF (50S ribosomal protein L2 OS=Geobacter sp. (strain FRC-32) GN=rplB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.152e-25 Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRN---GAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MAI YK ++ R+ + S P +L+ + G GRN G IT+ H GGGHK+ YR IDFRR+++DI ++ ++EYDP R+A I L++Y DGEKRYI+ P +GDT+V+ T IK GNALP+ ++ Sbjct: 1 MAIKSYKPTSAGRRHQTCSTFEEITTSQPERSLVVKLKKTG-GRNNFGRITSRHIGGGHKQKYRIIDFRRDKRDIPAKVASVEYDPYRSARIALLNYADGEKRYIIAPLDLKVGDTVVASTSADIKPGNALPIRSI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_DESAA (50S ribosomal protein L2 OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rplB PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.152e-25 Identity = 61/136 (44.85%), Postives = 81/136 (59.56%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRN---GAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MA+ K ++P R G + K P +LI + G GRNA G +T HRGGG +R R +DF+RN+ I ++ IEYDPNR A + L+HY DGEKRYI+ P +GD + SG E IK GNALPL+ + Sbjct: 1 MAVRKTKPTSPGRRFQEFGTFEEITKKKPEKSLIKVVKKSG-GRNANGRVTCRHRGGGSRRQLRIVDFKRNKTGIPAKVAAIEYDPNRGARLALLHYVDGEKRYIIAPVNLTVGDMVESGPEADIKPGNALPLNNI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_STRE4 (50S ribosomal protein L2 OS=Streptococcus equi subsp. equi (strain 4047) GN=rplB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 64/133 (48.12%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRN-GAVDSQ--VKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL 432 M I +YK +T RN ++D S P +L+ GRN G IT H+GGGHKR YR IDF+RN+ + + TIEYDPNR A I L+HY DG K YI+ P+G +G IVSG + IK+GNALPL Sbjct: 1 MGIKVYKPTTNGRRNMTSLDFAEITTSTPEKSLLVSLKNKA-GRNNNGRITVRHQGGGHKRHYRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYIIAPKGLEVGQRIVSGPDADIKVGNALPL 132
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_RICAH (50S ribosomal protein L2 OS=Rickettsia akari (strain Hartford) GN=rplB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 66/136 (48.53%), Postives = 84/136 (61.76%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGA-VD--SQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MA+ + TPS R VD S K P +L G + G GRN +G IT+ HRGGGHK+LYR IDF+RN+ DI + IEYDPNR A+I LI Y DGE YIL P+ +GD ++S + IK+GN LPL + Sbjct: 1 MALRNFNPITPSLRELVQVDRTSLWKGRPLKSLTKGISKTG-GRNNQGRITSWHRGGGHKKLYRIIDFKRNKIDISAVVERIEYDPNRTAFIALIKYEDGEYSYILAPQKLSVGDRVMSSQDADIKIGNCLPLKFI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_DESVM (50S ribosomal protein L2 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 63/136 (46.32%), Postives = 80/136 (58.82%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAV---DSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MA+ K ++P R V + +S P +L G + GRN G +T RGGGHKRLYR IDFRRN+ I + IEYDPNR A I L+HY DGEKRYIL P G GD + +G IK GNA+P++ + Sbjct: 1 MAVRKLKPTSPGRRFQTVSDFEEVTRSTPEKSLTEGLTK-KSGRNNNGRVTMRRRGGGHKRLYRIIDFRRNKLGIAATVAHIEYDPNRTARIALLHYADGEKRYILAPLGIKQGDMVQAGEGADIKPGNAMPMARI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_DEIGD (50S ribosomal protein L2 OS=Deinococcus geothermalis (strain DSM 11300) GN=rplB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 65/137 (47.45%), Postives = 81/137 (59.12%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRNGAV---DSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEK-DIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MA+ Y+ TPS R K P L + G GRN G IT+ GGGHKRLYR IDF+R +K ++ ++ IEYDPNR+A I L+HY DGEKRYIL P G +G T+ +G E K+GNALPL V Sbjct: 1 MAVKKYRPYTPSRRQMTTADFSGLTKKRPEKALTVPLPKTG-GRNNHGRITSRFIGGGHKRLYRIIDFKRRDKANVPAKVAAIEYDPNRSARIALLHYVDGEKRYILAPEGLTVGQTVNAGPEAEPKLGNALPLRFV 136
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_BACFR (50S ribosomal protein L2 OS=Bacteroides fragilis GN=rplB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 58/136 (42.65%), Postives = 85/136 (62.50%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRN---GAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MA+ +K +TP R+ G + S P +L+YG+ G GRN G +T + GGGH+++ R +DF+RN+ + + TIEYDPNR+A I L+ Y DGEKRYI+ P G +G T++SG ++GNALPL + Sbjct: 1 MAVRKFKPTTPGQRHKIIGTFEEITASVPEKSLVYGKKSSG-GRNNEGKMTMRYLGGGHRKVIRIVDFKRNKDGVPAVVKTIEYDPNRSARIALLFYADGEKRYIIAPNGLQVGATLMSGENAAPEIGNALPLQNI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_BACFN (50S ribosomal protein L2 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=rplB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 58/136 (42.65%), Postives = 85/136 (62.50%), Query Frame = 1 Query: 43 MAIHLYKTSTPSTRN---GAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 MA+ +K +TP R+ G + S P +L+YG+ G GRN G +T + GGGH+++ R +DF+RN+ + + TIEYDPNR+A I L+ Y DGEKRYI+ P G +G T++SG ++GNALPL + Sbjct: 1 MAVRKFKPTTPGQRHKIIGTFEEITASVPEKSLVYGKKSSG-GRNNEGKMTMRYLGGGHRKVIRIVDFKRNKDGVPAVVKTIEYDPNRSARIALLFYADGEKRYIIAPNGLQVGATLMSGENAAPEIGNALPLQNI 135
BLAST of FC876454 vs. ExPASy Swiss-Prot
Match: RL2_ACIF5 (50S ribosomal protein L2 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=rplB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 55/111 (49.55%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 109 KSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 441 K NP + L+ Q G GRN G +T H+GGGHK YR +DF+RN+ DI G++ +EYDPNR+A+I LI Y DGE+RYIL +G +GD ++S + PIK GN +PL + Sbjct: 26 KGNPHSALVEVQSHSG-GRNNLGRVTRRHQGGGHKSHYRLVDFKRNKLDIPGKVERLEYDPNRSAHIALICYVDGERRYILAAKGMSVGDPVLSAEQTPIKPGNCMPLRGI 135 The following BLAST results are available for this feature:
BLAST of FC876454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876454 ID=FC876454; Name=FC876454; organism=Citrus clementina; type=EST; length=903bpback to top |