FC876468

Overview
NameFC876468
Unique NameFC876468
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10367 contig Ccv1_Contig10367:1..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF14_ARATH (Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana GN=ERF014 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.973e-18
Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 2
Query:  260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSA-RLNFPE-------LIFQEDDLRDVSAASIRKKATEVGA 508
            YKG+RMR WG WV+EIR PN+++RIWLGSY+T  AAARAYD A+  L+G SA  LNFPE       +I   D+  D+S  SI++ A    A
Sbjct:   35 YKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANNLNFPEISTSLYHIINNGDNNNDMSPKSIQRVAAAAAA 125          
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF12_ARATH (Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana GN=ERF012 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 2
Query:  260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFP 430
            YKG+RMR WG WV+EIR PN+++RIWLGSY+T  AAARAYD A+  L+GP A LNFP
Sbjct:   50 YKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFP 106          
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.777e-18
Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 2
Query:  260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIF-----QEDDLRDVSAAS 478
            Y+G+RMR WGKWV+EIREP K+SRIWLG+++TP  AARA+D A   ++G SA LNFPEL            RDV AA+
Sbjct:   43 YRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAA 120          
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.851e-18
Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELI 439
            Y+GIR RKWGKWV+EIREP K++RIWLGSY T   AA AYD A  +LRG    LNFPEL+
Sbjct:   20 YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79          
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.156e-17
Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = 2
Query:  260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQ-----EDDLRDVSAAS 478
            ++G+RMR+WGKWV+EIREP K+SRIWLG+++T   AARA+D A   ++G SA LNFPEL +        D +D+ AA+
Sbjct:   45 FRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQAAA 122          
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.575e-17
Identity = 39/60 (65.00%), Postives = 47/60 (78.33%), Query Frame = 2
Query:  260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELI 439
            Y G+R R+WGKWV+EIREP K+SRIWLGS+  P  AA+AYD A F L+G  A+LNFPE I
Sbjct:   45 YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEI 104          
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.575e-17
Identity = 38/59 (64.41%), Postives = 48/59 (81.36%), Query Frame = 2
Query:  260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPEL 436
            Y+G+RMR WGKWV+EIREP K+SRIWLG++ TP  AARA+D A   ++G +A LNFPEL
Sbjct:   51 YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPEL 109          
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF54_ARATH (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana GN=ERF054 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 2
Query:  260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPE-LIFQEDDLRDVSAASIRKKATEVGAKVD 517
            Y+G+R R+WGKWVAEIR+P  R+R+WLG++ T   AA AYD   F LRG SA LNFPE  + +E +L D +++  ++  T   ++V+
Sbjct:  143 YRGVRQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFPEHFVNKESELHDSNSSDQKEPETPQPSEVN 229          
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF16_ARATH (Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana GN=ERF016 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 2
Query:  260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPE 433
            Y G+R RKWGKWVAEIR PN R RIWLGS+ +   AARA+D A++ LRGP AR NFP+
Sbjct:    7 YTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPD 64          
BLAST of FC876468 vs. ExPASy Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.278e-16
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 2
Query:  260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPEL 436
            Y+G+RMR WGKWV+EIREP K+SRIWLG+Y T   AARA+D A   ++G S  LNFPEL
Sbjct:   71 YRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPEL 129          
The following BLAST results are available for this feature:
BLAST of FC876468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
ERF14_ARATH3.973e-1852.75Ethylene-responsive transcription factor ERF014 OS... [more]
ERF12_ARATH5.189e-1868.42Ethylene-responsive transcription factor ERF012 OS... [more]
ERF37_ARATH6.777e-1856.41Ethylene-responsive transcription factor ERF037 OS... [more]
ERF22_ARATH8.851e-1866.67Ethylene-responsive transcription factor ERF022 OS... [more]
ERF38_ARATH1.156e-1752.56Ethylene-responsive transcription factor ERF038 OS... [more]
ERF23_ARATH2.575e-1765.00Ethylene-responsive transcription factor ERF023 OS... [more]
DREB3_ARATH2.575e-1764.41Dehydration-responsive element-binding protein 3 O... [more]
ERF54_ARATH7.493e-1747.13Ethylene-responsive transcription factor ERF054 OS... [more]
ERF16_ARATH7.493e-1765.52Ethylene-responsive transcription factor ERF016 OS... [more]
ERF35_ARATH1.278e-1664.41Ethylene-responsive transcription factor ERF035 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CB05RM1 EHR Citrus clementina cDNA clone KN0AAN2CB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876468 ID=FC876468; Name=FC876468; organism=Citrus clementina; type=EST; length=683bp
GCACGAGGCGGCACGAGGCACATATATAAGTGACTTGTACAGCATCTGCG
GCAATAAAAGTGGAGTCGCCTTAATTATTTTTGGGTTGGGCATCGGTATG
TGTCCCTCAGAACTCACAACAAGAAGAAAACTTTGATTAATTATCTACGA
AAACGACATGGAAGGAGGCGGGTGCTGCAGCACTTCGACTTCAACGAAAA
GCCCAGAGAAGCGGAAGCCAAGGCAGCAGCGGCAACACCAACAGCAGCAG
GAAAAGCCGTACAAGGGGATAAGGATGAGGAAGTGGGGGAAGTGGGTCGC
TGAAATTAGAGAGCCTAACAAGAGATCCAGAATCTGGCTTGGTTCTTACA
CCACGCCTATAGCCGCCGCACGTGCCTACGACACGGCCGTCTTCTATCTC
CGGGGCCCTTCCGCTCGTCTTAACTTCCCCGAATTGATTTTCCAAGAAGA
CGATCTTCGAGACGTTTCTGCCGCTTCAATACGCAAGAAAGCTACCGAAG
TTGGCGCTAAGGTCGACGCTTTACAAGCTGCTCTCCATGCTGCTAATTCA
GAATCTGAATCCAATTCCAATTCCAATTTCAATTCCATTCGATTGTCCGA
GAAGCCTGATTTAAACAAGTTTCCAGAGAGTTCTGATGAAGATTGATAAC
ACAAAATACTTGCAAGCTCACAATTACCTACCC
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