FC876499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_PROMA (Protein grpE OS=Prochlorococcus marinus GN=grpE PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.579e-23 Identity = 65/176 (36.93%), Postives = 99/176 (56.25%), Query Frame = 1 Query: 343 EEAPTSFIMETLQSYKEALASNDDTKAAEIEALLKSFEDEK--------------IDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 EE TS E L + +E +AS + + + E + +S D+ +D E ++ L +E R++ +RI+ADFDNFRKR +++ L + +L V+DNFERA+ QI + E I+ +YQ++YKQLV++L LGV P+ VG FDP LHEA++RE S Sbjct: 3 EEVSTSN-QEDLVADQEVIASEESDLSPKEEKVSESTIDDDDSLNDAELQSNKQTLDNEARLEQLEKEHETLRSQYVRIAADFDNFRKRQSRDQDDLKLQLTCNTLSEILPVVDNFERARQQINPEGEEALTIHRNYQNLYKQLVDVLKKLGVAPMRVVGQSFDPTLHEALLREPS 177
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_PROM3 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9303) GN=grpE PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.745e-23 Identity = 59/145 (40.69%), Postives = 87/145 (60.00%), Query Frame = 1 Query: 394 ALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 A ++D+ + + A L E LE++ +L EE R++ +RI+ADFDNFRKR +++ L + +L V+DNFERA+ Q++ Q E + ++ SYQ +YKQLVE+L LGV + VG FDP LHEA+ RE S Sbjct: 27 ASMNSDEGQPSAQSAPLADNEARLQQLEQEHSSLREEHETLRSQYMRIAADFDNFRKRQSRDQDDLRLQLICTTLSEILPVVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVEVLKQLGVASMRVVGQAFDPTLHEAVSREPS 171
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_PROM0 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9301) GN=grpE PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.503e-23 Identity = 55/154 (35.71%), Postives = 92/154 (59.74%), Query Frame = 1 Query: 370 ETLQSYKEALASNDDTKAAEIEAL-LKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 E S + + ND+ + + E + + ++ + + ++ L +E + + +RISADFDNFRKR +++ L + + +L ++DNFERA+ Q+K ++E + ++ SYQ +YKQLVE+L GV P+ VG FDP LHEA++RE S Sbjct: 24 EDKSSMQNSTTENDELSSQKTEEINTEELKNTISNNDARLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPS 177
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_GLOVI (Protein grpE OS=Gloeobacter violaceus GN=grpE PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.503e-23 Identity = 56/152 (36.84%), Postives = 90/152 (59.21%), Query Frame = 1 Query: 382 SYKEALASNDDTKAAEIEALLKSFED---EKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 SY EA + + AAE + + E DL++K+ + ++ + R+ ADFDNFRKRT++E+ L ++++ +L V DNF+RA+ + E EE ++NSYQ +Y+Q + +L +GV +E +G PFDP HEAI+RE+S Sbjct: 17 SYAEAATT--EASAAEATGFIARIDQLAAENSDLQKKLADYEQKYT-------RLMADFDNFRKRTQREKDELAYFVSAKLLKDILPVFDNFDRARAFAQPDNEREEKLHNSYQQVYRQFLSVLEKMGVTAMEAIGQPFDPAQHEAILREES 159
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_PROM2 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9215) GN=grpE PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.799e-23 Identity = 55/154 (35.71%), Postives = 94/154 (61.04%), Query Frame = 1 Query: 370 ETLQSYKEALASNDDTKAAEIEAL-LKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 E + S + + ND+ + + EA+ + ++ + + ++ L +E + + +RISADFDNFRKR +++ L + + +L ++DNFERA+ Q++ ++E + ++ SYQ +YKQLVE+L GV P+ VG FDP LHEA++RE S Sbjct: 24 EDISSEQNSTNENDELTSQKKEAINTEELKNTISNNDARLKQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQIVSKTLTAILPIVDNFERARQQLQPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPS 177
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_PROM9 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9312) GN=grpE PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.671e-22 Identity = 56/154 (36.36%), Postives = 90/154 (58.44%), Query Frame = 1 Query: 370 ETLQSYKEALASNDDTKAAEIEAL-LKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 E S E ND+ + E + + ++ + + ++ L +E + + +RISADFDNFRKR +++ L + + +L ++DNFERA+ Q+K ++E + ++ SYQ +YKQLVE+L GV P+ VG FDP LHEA++RE S Sbjct: 24 EDNSSAAEKTIENDELSPQKTEEINTEELKNTISNNDARLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKVQLVSKTLTAILPIVDNFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPS 177
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_PROMM (Protein grpE OS=Prochlorococcus marinus (strain MIT 9313) GN=grpE PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.183e-22 Identity = 57/145 (39.31%), Postives = 88/145 (60.69%), Query Frame = 1 Query: 394 ALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 A ++D+ +++ A L E LE++ +L EE R++ +RI+ADFDNFRKR +++ L + +L V+DNFERA+ Q++ Q E + ++ SYQ +YKQLV++L +GV + VG FDP LHEA+ RE S Sbjct: 27 ASINSDEGQSSAQSAPLADNEARLQQLEQEHSSLREEHETLRSQYMRIAADFDNFRKRQSRDQDDLRFQLICTTLSEILPVVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVDVLKQMGVASMRVVGQVFDPTLHEAVSREPS 171
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_PROMT (Protein grpE OS=Prochlorococcus marinus (strain NATL2A) GN=grpE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.851e-22 Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 469 DLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 D E ++ L +E ++ +RI+ADFDNFRKR +++ L + +L ++DNFERA+ Q+ + E + ++ SYQ +YKQLVE+L +LGV P+ V FDP LHEA+MRE S Sbjct: 75 DTEARLQQLEKEHETLNSQYMRIAADFDNFRKRQTRDQDDLKIQLTCTTLSEILPIVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKNLGVAPMRVVDQAFDPSLHEAVMREPS 194
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_PROM1 (Protein grpE OS=Prochlorococcus marinus (strain NATL1A) GN=grpE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.851e-22 Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 469 DLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 D E ++ L +E ++ +RI+ADFDNFRKR +++ L + +L ++DNFERA+ Q+ + E + ++ SYQ +YKQLVE+L +LGV P+ V FDP LHEA+MRE S Sbjct: 75 DTEARLQQLEKEHETLNSQYMRIAADFDNFRKRQTRDQDDLKIQLTCTTLSEILPIVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKNLGVAPMRVVDQAFDPSLHEAVMREPS 194
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_PROM5 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9515) GN=grpE PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.724e-22 Identity = 54/150 (36.00%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 379 QSYKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828 Q+ ++ +D+ + + E L + + LE+ L +E +++ +RI+ADFDNFRKR +++ L + + +L ++DNFERA+ Q+K + + + ++ SYQ +YKQLVE+L GV P+ VG FDP LHEA++RE S Sbjct: 32 QTNEDKKLPDDNNEKIDAEDLKNTITNNDARLEQ----LEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKIQLVSKALTAILPIVDNFERARQQLKPEGDEAQTLHRSYQGLYKQLVEVLKQQGVAPMRVVGQQFDPNLHEAVLREPS 177 The following BLAST results are available for this feature:
BLAST of FC876499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876499 ID=FC876499; Name=FC876499; organism=Citrus clementina; type=EST; length=829bpback to top |