FC876499

Overview
NameFC876499
Unique NameFC876499
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length829
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_ACIC5 (Protein grpE OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=grpE PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.314e-14
Identity = 53/138 (38.41%), Postives = 71/138 (51.45%), Query Frame = 1
Query:  421 AAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEA---IMRED 825
            AAE +A +   E E++  ER       E  A + R+ R+ A+FDN RKR  KER      +     E  L VLDNF+ A       T   E +    + I KQ+ E L SL ++P+ETVG  FDP +HEA   + RED
Sbjct:   37 AAEPQAQILQEEVERLRAERDAALADRE--AFQDRLARLQAEFDNARKREAKERSEFRDYSVASTAEAFLPVLDNFQLALAS----TGTAEQLRMGVELIVKQMDEALRSLSIIPIETVGAQFDPRVHEALEMVERED 168          
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_SORC5 (Protein grpE OS=Sorangium cellulosum (strain So ce56) GN=grpE PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.086e-13
Identity = 50/151 (33.11%), Postives = 79/151 (52.32%), Query Frame = 1
Query:  382 SYKEALASNDDT-KAAEIEA-LLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMREDS 828
            S  E   SN +T + AE  A   ++ E +    E K+     E +  R ++LR +ADFDNFRKR+ +E        +  +++ LL V DN ERA +  +   + +  +    + + KQ V+ L  +G+  +  VG PFDP +HEAI + DS
Sbjct:    2 SDSEQNGSNQNTGETAEAHAERAEAAEQQASTPEDKLGEAQAEAARMREQLLRTAADFDNFRKRSRREVEEAQRRGREAILKDLLPVFDNLERAASHAESAPDAKS-VAEGVRIVTKQFVDTLDRMGIKRIAAVGKPFDPSVHEAIQQLDS 151          
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_CLOPE (Protein grpE OS=Clostridium perfringens GN=grpE PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.086e-13
Identity = 49/136 (36.03%), Postives = 78/136 (57.35%), Query Frame = 1
Query:  412 DTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGE-EXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIM 816
            D K  + E L ++ ++E    + K   L  EL A + R+LRISA+++N+RKRT+KE+  + T+A  +V+ ++L VLDN ERA     +  +G  E +    +   +Q  + L  L V  + T  N FDP LH+A+M
Sbjct:   44 DEKVIDFEEL-QALKEENTMFKSKTKKLENELEALKDRLLRISAEYENYRKRTDKEKERIYTDACEDVLIKMLPVLDNLERA-----LAVDGTVEDLKKGVEMTVRQFEDALEKLQVEEIST-ENGFDPELHQAMM 172          
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_THETN (Protein grpE OS=Thermoanaerobacter tengcongensis GN=grpE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.418e-13
Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  346 EAPTSFIMETLQSYKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGE-EXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMRED 825
            E P S + ++ +  +E + +  + K     +L +  E+ +  LE K     E L   +    RI A+FDN+RKRTEKE+  +++  Q +V+  LL V+DNFERA     +  EG+   +    + IY+Q  ++L    V  +E  G  FDP  H A+ +E+
Sbjct:   22 EGPPSELEQSEEVVEEKIETEVEQKKEP--SLEEIVEELRKKLEEKEKEAKEYLDIAQ----RIKAEFDNYRKRTEKEKAEMISYGQEQVIIELLPVIDNFERA-----LANEGDYNSLREGLELIYRQFKKVLDKFEVREIEAEGQMFDPYKHHALAQEE 171          
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_SYNFM (Protein grpE OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=grpE PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13
Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  442 LKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMRED 825
            L + E  + D    +    EEL   + R+LR++A+ DN RKR E+E+   +  A   +M+ LL VLDN ERA    + + +    +     ++ K  ++ L   G  P E+VGN FDP  HEA+M+E+
Sbjct:   25 LVAVEPGEPDYRELLARKEEELKQSQDRLLRMAAELDNTRKRLEREKSEGIAYANEGLMKDLLPVLDNLERALEHSENEADCGSLVEGVRMTL-KGFLDSLARFGCTPFESVGNAFDPNFHEAVMQEE 151          
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_BACHK (Protein grpE OS=Bacillus thuringiensis subsp. konkukian GN=grpE PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13
Identity = 47/149 (31.54%), Postives = 82/149 (55.03%), Query Frame = 1
Query:  409 DDTKAAEIE-ALLKSFEDEKID-------LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMR-EDS 828
            ++ K A++E A+     +E ++       L+ KV  L  +L+    R LR+ ADF+N+++R + ++ +        ++  +L  LDNFERA  Q++   E  + +    + +++QL+E L   GV  +E VG  FDP  H+AIM+ EDS
Sbjct:   10 EEVKEAQVEEAVTPENSEETVEEKSEAALLQEKVDELQAKLTETEGRTLRLQADFENYKRRVQMDKQAAEKYRAQSLVSDILPALDNFERA-MQVEATDEQTKSLLQGMEMVHRQLLEALNKEGVEVIEAVGKQFDPNEHQAIMQVEDS 157          
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_BACCZ (Protein grpE OS=Bacillus cereus (strain ZK / E33L) GN=grpE PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13
Identity = 47/149 (31.54%), Postives = 82/149 (55.03%), Query Frame = 1
Query:  409 DDTKAAEIE-ALLKSFEDEKID-------LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMR-EDS 828
            ++ K A++E A+     +E ++       L+ KV  L  +L+    R LR+ ADF+N+++R + ++ +        ++  +L  LDNFERA  Q++   E  + +    + +++QL+E L   GV  +E VG  FDP  H+AIM+ EDS
Sbjct:   10 EEVKEAQVEEAVTPENSEETVEEKSEAALLQEKVDELQAKLTETEGRTLRLQADFENYKRRVQMDKQAAEKYRAQSLVSDILPALDNFERA-MQVEATDEQTKSLLQGMEMVHRQLLEALNKEGVEVIEAVGKQFDPNEHQAIMQVEDS 157          
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_BACCR (Protein grpE OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=grpE PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13
Identity = 47/149 (31.54%), Postives = 82/149 (55.03%), Query Frame = 1
Query:  409 DDTKAAEIE-ALLKSFEDEKID-------LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMR-EDS 828
            ++ K A++E A+     +E ++       L+ KV  L  +L+    R LR+ ADF+N+++R + ++ +        ++  +L  LDNFERA  Q++   E  + +    + +++QL+E L   GV  +E VG  FDP  H+AIM+ EDS
Sbjct:   10 EEVKEAQVEEAVTPENSEETVEEKSEAALLQEKVDELQAKLTETEGRTLRLQADFENYKRRVQMDKQAAEKYRAQSLVSDILPALDNFERA-MQVEATDEQTKSLLQGMEMVHRQLLEALTKEGVEVIEAVGKQFDPNEHQAIMQVEDS 157          
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_BACC4 (Protein grpE OS=Bacillus cereus (strain B4264) GN=grpE PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13
Identity = 47/149 (31.54%), Postives = 82/149 (55.03%), Query Frame = 1
Query:  409 DDTKAAEIE-ALLKSFEDEKID-------LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMR-EDS 828
            ++ K A++E A+     +E ++       L+ KV  L  +L+    R LR+ ADF+N+++R + ++ +        ++  +L  LDNFERA  Q++   E  + +    + +++QL+E L   GV  +E VG  FDP  H+AIM+ EDS
Sbjct:   10 EEVKEAQVEEAVTPENSEETVEEKSEAALLQEKVDELQAKLTETEGRTLRLQADFENYKRRVQMDKQAAEKYRAQSLVSDILPALDNFERA-MQVEATDEQTKSLLQGMEMVHRQLLEALTKEGVEVIEAVGKQFDPNEHQAIMQVEDS 157          
BLAST of FC876499 vs. ExPASy Swiss-Prot
Match: GRPE_BACC2 (Protein grpE OS=Bacillus cereus (strain G9842) GN=grpE PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13
Identity = 47/149 (31.54%), Postives = 82/149 (55.03%), Query Frame = 1
Query:  409 DDTKAAEIE-ALLKSFEDEKID-------LERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEXINNSYQSIYKQLVEILXSLGVVPVETVGNPFDPLLHEAIMR-EDS 828
            ++ K A++E A+     +E ++       L+ KV  L  +L+    R LR+ ADF+N+++R + ++ +        ++  +L  LDNFERA  Q++   E  + +    + +++QL+E L   GV  +E VG  FDP  H+AIM+ EDS
Sbjct:   10 EEVKEAQVEEAVTPENSEETVEEKSEAALLQEKVDELQAKLTETEGRTLRLQADFENYKRRVQMDKQAAEKYRAQSLVSDILPALDNFERA-MQVEATDEQTKSLLQGMEMVHRQLLEALTKEGVEVIEAVGKQFDPNEHQAIMQVEDS 157          
The following BLAST results are available for this feature:
BLAST of FC876499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GRPE_ACIC58.314e-1438.41Protein grpE OS=Acidobacterium capsulatum (strain ... [more]
GRPE_SORC51.086e-1333.11Protein grpE OS=Sorangium cellulosum (strain So ce... [more]
GRPE_CLOPE1.086e-1336.03Protein grpE OS=Clostridium perfringens GN=grpE PE... [more]
GRPE_THETN1.418e-1331.68Protein grpE OS=Thermoanaerobacter tengcongensis G... [more]
GRPE_SYNFM1.852e-1334.38Protein grpE OS=Syntrophobacter fumaroxidans (stra... [more]
GRPE_BACHK1.852e-1331.54Protein grpE OS=Bacillus thuringiensis subsp. konk... [more]
GRPE_BACCZ1.852e-1331.54Protein grpE OS=Bacillus cereus (strain ZK / E33L)... [more]
GRPE_BACCR1.852e-1331.54Protein grpE OS=Bacillus cereus (strain ATCC 14579... [more]
GRPE_BACC41.852e-1331.54Protein grpE OS=Bacillus cereus (strain B4264) GN=... [more]
GRPE_BACC21.852e-1331.54Protein grpE OS=Bacillus cereus (strain G9842) GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CE04RM1 EHR Citrus clementina cDNA clone KN0AAN2CE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876499 ID=FC876499; Name=FC876499; organism=Citrus clementina; type=EST; length=829bp
GCACGAGGCATAAAAACGCCGCCGTTTCACGCATCTTCTCTTCCCGCCAC
ACGTGCAGCCCCCATTTCCTTAAAATCTCCGAAACCCATCTGTATTTCCT
TCAGACAACGTCTAATAAGCACCAGCAGACTTTATCATCGGTCAAATTCT
CTCCGGTTCGTAAGTGTTCAGTCTCTCCGGTTCGTAAAGTTCTCTCCTTT
AGCTTCAACTGGAGAAACTGAAACCCAAGAGGAAATTCAGGAACCCCAAA
TTGAGGAATCTTCCGATGGTGCTGTTGGCATTGAAGATGGCACTAGTGAC
GATGATAGCTCTGGAGCTACTAGTGATGACACCTCAGATGCTGAGGAAGC
ACCTACTTCATTCATTATGGAAACACTCCAATCATACAAAGAAGCTTTGG
CCAGTAATGACGATACCAAAGCTGCTGAAATAGAGGCTTTATTAAAATCC
TTTGAAGATGAGAAAATTGATCTTGAGAGGAAAGTTGTTAACTTGTCTGA
AGAATTGTCAGCTGAGAGGGCTCGTATTCTTAGGATCAGTGCTGACTTTG
ACAATTTTCGTAAGAGAACGGAGAAGGAACGCCTTTCACTGGTAACAAAT
GCTCAAGGAGAAGTCATGGAGAGATTGTTGCAAGTTTTGGATAATTTTGA
GAGAGCTAAAACTCAAATTAAGGTGCAGACCGAGGGAGAGGAGNAAATAA
ACAACAGCTATCAGAGCATATATAAGCAATTAGTGGAAATCCTANGATCA
CTTGGTGTTGTTCCTGTGGAGACGGTTGGGAATCCTTTTGATCCATTGCT
TCACGAAGCAATTATGCGCGAGGATTCCA
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